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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000087:313305..318704- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03344.1 ID=Blg03344.1|Name=Blg03344.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5400bp|location=Sequence derived from alignment at Sc0000087:313305..318704- (Branchiostoma lanceolatum)
TACCCATACTCTTCAAAATTAGTGCTTTATACTTCTGTGATCTTGAAAGT
GAAAGTTAAAATGATGTTAGAATTAATCAGTGAAAAAAGGGGCGGTCTGA
AGCCAAATGTAGGGAAGGTGAATTTTTGTCGACATTTTCATATTTTGCAT
TTGTTCTCCGTTCTCTTTATTGATAGGAGAACCACCAACTGAAGAGCCTT
ATCTCTGAGCTGACATCATCTTCGGAGGGTCAACGAAGAGACAAGCGATC
CCATGGGTTGACGTCATTCCCGGGTGCTATACCAAGAGAGAAGCGCTCCC
GTTGGCTGACTGGGAGTGACGAAAGTAAGGGCGCCAAACCATCAGTCCTT
TCATCTCTAGCAGTATCCAGTTGTTGATGTTACATATTAAGAAAAACTTC
AATAGCATTTATTCAAGATTGACAGTGATATCAATATTCTATTGTGAGAT
TCTTGTTATCATATTCTTTTTATGATTGACACCATGAGCCGGTCGGAAAC
TGTACACGTTTACCTAGTTCAAAACCATTTTGGATTTAATATAGCAGTGC
TATTCTTCTAGGTATATGCCTGTGAAGTAAACATACCATTGGGATAGTAG
TAAATAACCATTGCAAATAAAATCGTTCTCATTTTATGGAAAACGTTCAA
ACTTTTTTTCAAATATAAGGATTGGACAGACCGAATTTTCGAACAGTCCT
CTGGTGTTGGAAACACGTTTTAACGTAGTTTTTCTATGATGTCGTATAGC
TTTATTAGAACAGATGAACTTTCTATATATGTCTATGTGTTTATGTTCTT
GTTTTCTTTCGGAAGTTCGCATAGTGAACCCAGGCACTGGTGCTACAGAC
ACGGACGAAGGCGTGGTGGAAGTTCGGAAGTTCGGGTTCTGGGGCCGGAT
CTGTGATAAGGACTGGGGGATGGGGGAGGCGAGCGTCGTCTGTAGGCAGC
TGGGATATCCGGGAGCACTGGAATTCTACAGGTAACGTTAATAATGGTCG
AGTGAGTGAGTGAGTGAGAGTGTGAGTGAGTGAGTGAGTGAGTGAGTGAG
TGAGTGAGTGAGTGAGGGAGGGAGGGAGTGAGAGTGAGTGAGTGAGTGAG
TGAGAGTGGGTGAGTGATAGTTTGTGAGTGAGTGAGTGCGAGTGAGTGTG
TGCGTTTGTGAGTGAGTACGTTTGTGAGTGAGTGTAAGTGGGTTAGTGCG
AGTGAGTTAGTGAGTGTGAGTGAGTGAGTGAGTGAGAGTGGGTGAGTGAT
TGAGTGAGTGAATGAATGAATGAATGAGTGGGTACGTTTGTGAGTGAGTA
CGTTTGTGAGTGGGTGTAAGTGGGTGAGTGCGAGTGAGTTAGTGAGTGTG
AGAGAGTGAGTGAGAGTGGGTGAGTGGGTGAGTTTGTGAGTGAGTGAGTG
AGTGAGTGAGAGTGGGTGAGTGAGCATGGGCGAGTGAGTGAATGAATGGG
TGAGTACTAGTGACTGAGTGTGAGTGGGTGAGTTTGTGAGTGAGTGTGAG
TGGGTGAGTGCGAGTGAGTTAGTGAGTGTGAGTGAGTGGGTGAGTGTGTG
AGTGAGCGTGAGTGAGTGCGCGAGTGAGTAGAGAAAGGTAGGAGGGAAGG
AGTAGGGAGGGAATGGTGGAAGGAGGGAGAGAGAGAGACGGACGGAGGCT
AAAGAAGAAAAACGAGGGATAGAAGGGAGAAAGAAAGAAAGGAATTAAAG
AATTTTCATAGTCAAAGAAAAGTATATATGGTCATAAATGATAATATGCT
CATTTGACAATTGCTCTTGCCTTCAGTATTTCATTGTTATCTGAATTCAA
CTTGTTTGCGTATGGTAGAGAAATGATGCTTTTCGAAGTATTGAGACATT
CATAGTGTTTAACATGTAGTTATGAGATGTGTAAAAAAAGTTATGACTAG
GTCTCCATACTCTATGCAATGTACACAGTGAGTGGAAAACCCCTGAGCAC
ACCCATTACACCCTTAATCTGTGAATTTGCTTACCACCCTCTGTTACTCT
AGAAAGGCGGAGAAGAAATTCGGTATTGGCCCTCGAACAGCTAACAGGTG
GCTGAGCGATGTTCAGTGCGCCGGAAACGAAGCGACCCTAGCGGAGTGTA
CGCTAAACACAGGGATCGGGGTGTGTGCTTCCAGACGCCGGTGGTCTGCA
GGGGTCAAATGTCAAGGTGAAGTTTATTACCTTCGCCGAGAAGGTTATGT
TTTCTTCAGCGTTCGCCTTGGTATCTGTGTGTCTGTGTGTGTGTGCATGT
TCGTCCGTAAACAGTATAACTTACCAATGCCCAAATGGATAGTCTTCATA
CTTGGTATGTATGTAGGTCGAACTCAAAATGTTTGGATTTTGGGCCCCCT
AGTGGCTTGCTATGGTATGGCAGCGGAACTTCCGGGTTTGATATCTAGCG
TTCTAGTTTAACTTTGTAAACTTCTTTTATTTATGATCTCTTGCCAGGCA
TACTTATTAACCATTCTGAGAAGCTTTAAAAAAACACTAAAACGCACTGT
ACATAGCATCATTGTGACAGGTTGTTTAGTGTAGTATGGCAAGCCACGTA
CCTGCAAAGCTGGTGTGTTCCGCGGAATGGCGCTTATACCAGGCAAGCCT
CTTGATTAACGCTTGTCCTGCTGGGTTTCCAGAGCAAAAATATACTCCAC
TGCTGAAGTGCCCACAGACATCATTGAAACAAAGGGTACTAGTTTGATAT
TGCTCATTACTACTTACTTCGCTTTACAAAAACCGAGAGGGTGCAACGTA
CGCATTCTAGAAATATCCTCAACCCGACAACTGTCAGGGATAGCATACAG
AACTATCGTGTGTAAACCGACAATTGTCGGGCTCAGCAGACTAGGGTATG
GCAAGCCATTTGATACCGCATCTTACATTCACTCTGCAATAGCTATAATT
GGACGTCGTGTCTTTATGTCTTTTCTGTTCATGTGTTTTTATATGTTCTC
CTCAGACCACGAGGATTGTGTCTCAGCACCGTGTAAAAATGGAGGGACCT
GCATTGATGGAGTAAAGAACTACACCTGTCAGTGCGCCCCTGGCTGGGGA
GGACGGAACTGCAGCGAAGGTGGTGTTAGCTTTATAGAATGCCACTAACT
ACTTAGTAATGATACGTTCAACTTCTACATGTGACCACCTCTACAAAAGG
ACCACCTGACCAATGTGACTACTTTTTTATGGTCCATAATTTTTCCACTG
GCACAAGCACTAATAATCCTGTCTATTATTATAACATAAGTGACCACCTG
TCCACATAGACCAGATACTATCTGTCCCCTGAGTGGTCTTCTTGGGCAAG
TTTGACTGTATCAACAGAAGACACAAATTTAAAGTTATGAAACATTCCTC
TTTTCAAATGTACCGCATAAGAATAAGTAAATATTAGGAGGTGCCACTAT
GAATGATTTGATTAATTCAAACATTTACTGAGACTCTCAGATTTCAAGAA
AATGCTGCTGTATTTTTTTCAGGAATTGGTCACAAGGCAGCAAATGGCCT
ACATCCCAAAATGTCACTTGAGGCCATACACATTCGAGCTCGGACAGGTA
TGTTATTGTTTAACTTCTCCTTATCAAAGATATAAAAAGATAATGAAAAA
TAATCAAAGATATTCTCTTTATCTTCTATGAAGAAAATAGAACTGGTTTG
TCCATATAACAATATAAAAAAAACAAAATGTATACCTGTTTTGTCCATAT
AGCAATATAAAAACTACATCCTGATATGCACTGAAGATTGTAAAACTTTC
CAGTGTATATCAGAATGTGGTGAAAGTAATTCTATCATAGGTATTTAATG
AATAATAACTTGTTGATTTTGCTCTCACAGATGCGATGACGCCACACAGT
GAAATAACAGTCAGCAGTAAGTATTCATTATAATGACATTTTTACATCCA
CATGTCACTTATACATTTTGTGATACGAACCAGAATATGTGACATAAATT
TTCCCATTAACACAAACATTAAGAATCCTGTCCATAGTGACCCCCTGTCC
CCATGTTCTCAATGATATGGAATGAAATTAAAGAAGTGTGAATGTTTTTA
TCTACTTTTAGATGAGAAGTTTACTCACTGGGAAGAGATGGAGGTGCCAA
ACTCACATTTTGCACTTGAGAATGGAGAACTGAGGGTCACAGAGGAGGGA
CATTATCTTATCTATGGCCAGGTGATAATTTTGCATAAACCTGTTAATGA
TATATATTGTAACGCGGACTATAGTAGTATATCAGTGCTGTACTGTACTG
TTTAATTATGCATAAAGCTATACTCAGTAGCTAAAGCACTCACAGTACCA
AGTGTTGGTTGCTCAGGATGCGGATAGAAGGAAAGCTTTAGTCAATAAAG
CCATGTGTTTGAAACTCTCGCGAGCTTACGTTCCGCAGTGCTCGTGATTC
GTCATTATTGACACTGAAGAAGGCGACAGTGGTCGTCGAAAATTTGATAC
GTGAATACCTTAGCGTTGGAAGAAAGTTTAGCATTGTATTATGATTACTA
CCAACACAAATGAGCTTCTATTATAAGAAAAAAGCTTATTGCAATTTTCT
TGTTTTGTTTCGTTTCAGATACTTTCACTCCTTTCACAAAAAAAGGATTG
TTCAGCGTATAGTTGCATTCTGTCGATGGAAAATTTTTCAATGTTGTATC
GAGTTAACGTTGTTGTCACTCGAAATACAATGTTTTTGGTTTTCAATATG
TTTGTGTGAGGATTTGGACTCAAGTCGTGACAATGTGATTAAACCACGCT
TATAACTGTAAAATGCAGAAATGTTCACGGGGATTTTATTTTCGCCGTAG
GGAGAAAATGGAGTGTTCGCGGTGGTTTTGAGTTTGCGTTTAAAACAATA
GTCGCACTAATTACAGTCACACAATGGAACGGCTTTTAAAGTAGTTTTAA
GTTCGCGGCAAAGAGTTCAGCACAAAAAAAGCTCATATAAAACGACCGTA
AACATTTCTGTTTTAAGTTCGCGGCAAAGAGTTCAGCACAAAAAAAGCTC
ATATAAAACGACCGTAAACATTTCTGCATTTACAGCTATATAAAACGGCC
AATCCAAGATGACATAATGTTATCTATCAAATTCAAAAGAAATTTTACAA
TGACTTTAAGGATAATAAAGTGATTTTTCTGTACAGGTTGGGGTAGCAAA
CGACCAGCATGACGCAACCTTCAAGTACTCCATCTTGGTTCACGAGACGC
CGTTCCTGACATGTGAGTCGTCTGCAGGAGGTAGCCCCCCACAATACACG
TGTTACACGGCTGGCGTGCACTACTTACGCCGTGATGACGTCATCTCACT
CATGATGGAGTGTGACAGGTGTCAGGTGACCACAGCGGAGGACTCCACAT
TCTTTGGTGTCATTAAACTATCCGCTAATCTAGCCTTAAAGGAGTCCTAA
Coding sequence (CDS) from alignment at Sc0000087:313305..318704- >Blg03344.1 ID=Blg03344.1|Name=Blg03344.1|organism=Branchiostoma lanceolatum|type=CDS|length=825bp|location=Sequence derived from alignment at Sc0000087:313305..318704- (Branchiostoma lanceolatum)
ATGGGGGAGGCGAGCGTCGTCTGTAGGCAGCTGGGATATCCGGGAGCACT
GGAATTCTACAGAAAGGCGGAGAAGAAATTCGGTATTGGCCCTCGAACAG
CTAACAGGTGGCTGAGCGATGTTCAGTGCGCCGGAAACGAAGCGACCCTA
GCGGAGTGTACGCTAAACACAGGGATCGGGGTGTGTGCTTCCAGACGCCG
GTGGTCTGCAGGGGTCAAATGTCAAGACCACGAGGATTGTGTCTCAGCAC
CGTGTAAAAATGGAGGGACCTGCATTGATGGAGTAAAGAACTACACCTGT
CAGTGCGCCCCTGGCTGGGGAGGACGGAACTGCAGCGAAGGAATTGGTCA
CAAGGCAGCAAATGGCCTACATCCCAAAATGTCACTTGAGGCCATACACA
TTCGAGCTCGGACAGATGCGATGACGCCACACAGTGAAATAACAGTCAGC
AATGAGAAGTTTACTCACTGGGAAGAGATGGAGGTGCCAAACTCACATTT
TGCACTTGAGAATGGAGAACTGAGGGTCACAGAGGAGGGACATTATCTTA
TCTATGGCCAGGTTGGGGTAGCAAACGACCAGCATGACGCAACCTTCAAG
TACTCCATCTTGGTTCACGAGACGCCGTTCCTGACATGTGAGTCGTCTGC
AGGAGGTAGCCCCCCACAATACACGTGTTACACGGCTGGCGTGCACTACT
TACGCCGTGATGACGTCATCTCACTCATGATGGAGTGTGACAGGTGTCAG
GTGACCACAGCGGAGGACTCCACATTCTTTGGTGTCATTAAACTATCCGC
TAATCTAGCCTTAAAGGAGTCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03344.1-exon-Sc0000087-1570713199:318381..318704 | Blg03344.1-exon-Sc0000087-1570713199:318381..318704 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:317724..317889 | Blg03344.1-exon-Sc0000087-1570713199:317724..317889 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:317118..317121 | Blg03344.1-exon-Sc0000087-1570713199:317118..317121 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:316539..316698 | Blg03344.1-exon-Sc0000087-1570713199:316539..316698 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:315636..315749 | Blg03344.1-exon-Sc0000087-1570713199:315636..315749 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:315158..315232 | Blg03344.1-exon-Sc0000087-1570713199:315158..315232 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:314839..314874 | Blg03344.1-exon-Sc0000087-1570713199:314839..314874 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:314534..314643 | Blg03344.1-exon-Sc0000087-1570713199:314534..314643 | Branchiostoma lanceolatum | exon |
| Blg03344.1-exon-Sc0000087-1570713199:313305..313568 | Blg03344.1-exon-Sc0000087-1570713199:313305..313568 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:313305..318704 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03344 |
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