Blg03318.0 (mRNA) - B. lanceolatum

Overview
NameBlg03318.0
Unique NameBlg03318.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000087:76900..78699+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03318.0 ID=Blg03318.0|Name=Blg03318.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1800bp|location=Sequence derived from alignment at Sc0000087:76900..78699+ (Branchiostoma lanceolatum)
ACAGCGAAAATTATGGCAGCGTAAGTATACATACTTCCATGTCTTTCGAA TATATAACCGTCGCTTGATTATTGCCTGGTATCCAGAAGTTCACATTTGT CCATTTATTTGTAGCATTCGACCTTTGGGAGCGAGGGCAAGCTTAAAGGG CTGGATACCAAAACAGGCTCTTTATCCATTTTAAAGCATTACTTTTAAAC TTGAAGCAGCCTTACATTGAACAAATTTTGTTGTATAGTTTTCAGTTTTC TCGCGAAGACCTGAAATACATACGGGTACCTTTTTTATTACACAAATTAC AATGAATATCCCTACCAACCTGTGGTAACTTTTGACTTCATTTTTTTTGA CTGGTTTCTGCCATCGCATGTTTACACCTTTTTTATGGGAAGTACCTTTG CATTAGTAGCGTTGACTTGTTTTCTTCTTTTTTTAAAGAATGAATCGAGC TTGGTCTGGAAATCTACTAAAGAAAAGCACAGTTTTCTTTGTCAACGTCC GAACCAAAGTGTTATGGAAAACAGTCACAATCATCAGTATACCGGTTAGA GTTCGCTTTGAAGTCCCTGCAACAGCGCAAGCTACAGCGACAGTAAGTTT GTGTACCTTTGATCAATTGGTAAGTAAATAAATATGCTAACAGGTGAGTC GATATACTAAATGCGTCGTCACTTGATGTTGTTTCTGAATTTATTTACTT GAGCAAAGAATAAAAAGGTGCTCACAATTAACCTAATGATTCCTTTTTTT CTTTAGATAAAGGCTGAGGCAAGTTTTACAGCTACTGCTACGGGTACTGC AATTATGGGTGCCTCGTGGATAATGGGAAGAGGACTTGTGCCAACTGCGA GGGTAAGAACTGAGATGCCCACTTTCATCATGATAAGGTCATAATTGAGA TCACAATTTCATAAAAGCTAAGGTGTTTGTGACTGATAGTAGTTGGGCTC GAGAACTCTCGCCAGAATTTTTGGAAAGTGGGGTAAATTTTTTTGGTCTT TGAAAAATGAAAAACTTATGAACTGAGAGTACAGAAAAAATTTCTAAGCT TCGATATACGCTTAGCAAGGGATTGAAACGATTAAATCCCTACTATGTAA ATCTCTGCCTACTAGCTAGCGATTGTGGAAATGGAAGTCAAGTTCAAAAA TGTTACAGATGTGTTGGATTTACAAGTAAAGCCCATATTTGCATCAATTT TATATGTTAATGATTTTCCCGACATAAATGCTTGTGTTTATTCTATATCT AACTATAGTTCCACGACTCATTACCTTCGCCAAATAATCAAGGCTTATTA TGGAAAGTGCCTTTATCCAAGACTTAAAAGATCATTTGGTGGTACAGGAC TAGTATACATGTATGTGTCTAGTGTGTTGATAAATGTTTGCATTACCTAC TTTTGTAGGTTTACATGACCTGCATCCCCAACCCCAACTGGGACATAGTG TCCCTGAAATCAGGTCGTACAGTAAGAAGCCCATTGTAGAAATTTCCACA TAAGTAATGTTAATGAAAAAAATCTAAGTATTCCCTGTTTATTCTAATCT TGTAGATTTTAAGAACAGAAGTACGTAATTCAACCGGTTTTACAATAAGG TATAATTGGAATGCCGTTTTAGTTTTCTTATGAACCAATCTGTGAATAAA CCATATACACATACTTTCATGTTATATTTCAAGATATGGCATAACACATA AACCATTGATATTTTTTGTTTTGCTGATTGGAAGGTATTTAGATTGTTCA GGGAGTGGTGTTCTCTTTATTCAACAGTCAACACTCAATTTTAATTTTCG

Coding sequence (CDS) from alignment at Sc0000087:76900..78699+

>Blg03318.0 ID=Blg03318.0|Name=Blg03318.0|organism=Branchiostoma lanceolatum|type=CDS|length=281bp|location=Sequence derived from alignment at Sc0000087:76900..78699+ (Branchiostoma lanceolatum)
ATGGCAGCAATGAATCGAGCTTGGTCTGGAAATCTACTAAAGAAAAGCAC
AGTTTTCTTTGTCAACGTCCGAACCAAAGTGTTATGGAAAACAGTCACAA
TCATCAGTATACCGGTTAGAGTTCGCTTTGAAGTCCCTGCAACAGCGCAA
GCTACAGCGACAATAAAGGCTGAGGCAAGTTTTACAGCTACTGCTACGGG
TACTGCAATTATGGGTGCCTCGTGGATAATGGGAAGAGGACTTGTGCCAA
CTGCGAGGTCAACACTCAATTTTAATTTTCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03318.0Blg03318.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03318.0-exon-Sc0000087-1570713199:76900..76919Blg03318.0-exon-Sc0000087-1570713199:76900..76919Branchiostoma lanceolatumexon
Blg03318.0-exon-Sc0000087-1570713199:77338..77491Blg03318.0-exon-Sc0000087-1570713199:77338..77491Branchiostoma lanceolatumexon
Blg03318.0-exon-Sc0000087-1570713199:77656..77751Blg03318.0-exon-Sc0000087-1570713199:77656..77751Branchiostoma lanceolatumexon
Blg03318.0-exon-Sc0000087-1570713199:78677..78699Blg03318.0-exon-Sc0000087-1570713199:78677..78699Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000087genomeSc0000087:76900..78699 +
Properties
Property NameValue
GeneIDBlg03318