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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056175 ID=TCONS_00056175|Name=TCONS_00056175|organism=Clytia hemisphaerica|type=transcript|length=1234bp
CTCAGGTCTCCGGCTAATTTTGctagccaaattctggagccgctcgctgc
gctgcagttgatgcccgtgtcgggacaaaaatcgaggcggaagccatttt
gtttacatttttggctgGGGAAGCACTGCAAAACAGTGCTTTTTGAGTAG
ATTTGGTGATTCTTGGGANAAAAATCGAGGcggaagccattttgtttaca
tttttggctgGGGAAGCACTGCAAAACAGTGCTTTTTAAGTAGATTTGGT
GATTCTtgggaagaaagaagaagaatactGCTTGGAACCAACATCAAATG
TATTGGAGTAGACTTCTATCATACATTGGAATAATAGACAATACTTTTTG
AACATAATGAATGTGTGAAActtgcttttttgtttacaaacttcACTCAA
GTAGTTTTGTCGATTTTGCTGCTTTCCAAAGCTGTTGATGATGGAGACTA
CTAACTTGCAAAAGTAACTTTATATTGGTGCAAACAATGACTATAATAGC
TTCACAAACATTCCCTATCATGGAATTCAGCTGGGAAAGATTTTTTCGAT
CGCATTAAACAGTTTTGATATGAGAGAGATATCCAAGATATAAGCTCACA
GTTCAAACAtggtttcacccatcccttttagataacaaaaatttcatgat
tcattttattcatctcaaaaatGGCTGAAGAGACACCATCGGCCAGATCG
GCTGCAATAAAGTATAAACTTAActttaactctcaaaattttgtccTTGA
ATCTTCCCAGTCGTCAAAGACCGAGTTATAATGTTATAAAAGTGACTGAT
TTTGGGGTACGTTTTACGTGCAGGCTTTGATTGGATCCAGGACAAGAAAA
GGATAAGCGATTCCGAAGAAAGtgcccaaaaattctgaaattttggaagt
actgcaaaaaattgaaagtaNCAGGACAAGAAAAGGATAAGCGAATCCGA
AGAAAGtgcccaaaaattctgaaattttggaaatactgcaaaaaattgaa
agtacgTTACAACATTGACATTGTGTATATCATATAatggattgttattg
ttttggataTCTGGCAtaccgtcaacggctctaacttgggacgggTGGTC
ATATCATGGGATGGTTGACTTTCTGGACTGTATTTTCAGTTAGGGaagcc
atccaggatcctgccattctataagccagcaaaaactaaatgccacttgt
aaagttaagtttcttactattttccatcaaaaac Run BLAST on NCBI transcript from alignment at scaffold_268:53067..54300 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056175 ID=TCONS_00056175|Name=TCONS_00056175|organism=Clytia hemisphaerica|type=transcript|length=1234bp|location=Sequence derived from alignment at scaffold_268:53067..54300 (Clytia hemisphaerica)
gtttttgatggaaaatagtaagaaacttaactttacaagtggcatttagt
ttttgctggcttatagaatggcaggatcctggatggcttCCCTAACTGAA
AATACAGTCCAGAAAGTCAACCATCCCATGATATGACCAcccgtcccaag
ttagagccgttgacggtaTGCCAGAtatccaaaacaataacaatccatTA
TATGATATACACAATGTCAATGTTGTAAcgtactttcaattttttgcagt
atttccaaaatttcagaatttttgggcaCTTTCTTCGGATTCGCTTATCC
TTTTCTTGTCCTGNtactttcaattttttgcagtacttccaaaatttcag
aatttttgggcaCTTTCTTCGGAATCGCTTATCCTTTTCTTGTCCTGGAT
CCAATCAAAGCCTGCACGTAAAACGTACCCCAAAATCAGTCACTTTTATA
ACATTATAACTCGGTCTTTGACGACTGGGAAGATTCAAggacaaaatttt
gagagttaaagTTAAGTTTATACTTTATTGCAGCCGATCTGGCCGATGGT
GTCTCTTCAGCCatttttgagatgaataaaatgaatcatgaaatttttgt
tatctaaaagggatgggtgaaaccaTGTTTGAACTGTGAGCTTATATCTT
GGATATCTCTCTCATATCAAAACTGTTTAATGCGATCGAAAAAATCTTTC
CCAGCTGAATTCCATGATAGGGAATGTTTGTGAAGCTATTATAGTCATTG
TTTGCACCAATATAAAGTTACTTTTGCAAGTTAGTAGTCTCCATCATCAA
CAGCTTTGGAAAGCAGCAAAATCGACAAAACTACTTGAGTgaagtttgta
aacaaaaaagcaagTTTCACACATTCATTATGTTCAAAAAGTATTGTCTA
TTATTCCAATGTATGATAGAAGTCTACTCCAATACATTTGATGTTGGTTC
CAAGCagtattcttcttctttcttcccaAGAATCACCAAATCTACTTAAA
AAGCACTGTTTTGCAGTGCTTCCCcagccaaaaatgtaaacaaaatggct
tccgCCTCGATTTTTNTCCCAAGAATCACCAAATCTACTCAAAAAGCACT
GTTTTGCAGTGCTTCCCcagccaaaaatgtaaacaaaatggcttccgcct
cgatttttgtcccgacacgggcatcaactgcagcgcagcgagcggctcca
gaatttggctagCAAAATTAGCCGGAGACCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056175-exon-scaffold_268-1491911889:53067..54300 | TCONS_00056175-exon-scaffold_268-1491911889:53067..54300 | Clytia hemisphaerica | exon |
| TCONS_00056175-exon-scaffold_268-1510915933:53067..54300 | TCONS_00056175-exon-scaffold_268-1510915933:53067..54300 | Clytia hemisphaerica | exon |
| TCONS_00056175-exon-scaffold_268-1575043694:53067..54300 | TCONS_00056175-exon-scaffold_268-1575043694:53067..54300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_268 | supercontig | scaffold_268:53067..54300 . |
Blast
The following BLAST results are available for this feature:
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