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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055752 ID=TCONS_00055752|Name=TCONS_00055752|organism=Clytia hemisphaerica|type=transcript|length=971bp
tattaacatagtaaagcaaaaaaaattcaataaaacaCAGCTTTGGCTTT
TTACTGAAAATTgataaatcaatgaaatcaaaacaagaaaCACAATCTTT
TCATAGGGACTGATAGGGACTAAAAAATAACCCTACAACATCTTTAAGTC
TTAGGGCTTTACAGCACTAAAAGTTAAGGGAAAATCATGGTCTGCACTGC
TATCACATACATTCAAGAACCATTTCTTAAAAAGTTGAGAgcagtttttc
aaaagaaaagaacaatataaaacaatttttcttAAAGCAAGATAATTTAT
CTAATGCTGTACTGGCACTTGTTCTAAGCGTTAAATGTGGTccaaacaag
ttaaaaacagtcTGACAGTTATAAACAACTCAGAGCTTAAAAACtacgtt
caaattttagaacaaCTGAAGTAAATGTCAACAATAAAGAATAATTTCAA
CGCCAAGAAATTCCATTACAAAACCAACAATACAGTAATCTATTGGTTTT
TTGTGTCTCTAGCCATCAATAATTGGAGCATCGCCTGATTTTGTCTTTGC
TGCTGATCTAACAATTTTCTTCACGTTTCGCAGCAATCTCAAGTTCTTTC
TCCTTCAAAGTTTTATCTATATTCATTTTCTCTCTCATAAAACACAATGT
ATCATCTCCTGATCTTCTTGTTCGTTTCGTTTTTGAATTGGATTCCGTTG
CTGGTTCATCGCCTTTTCTTTTGGTCGTCTCTGAGTGAGTCTCCATGCAT
TGCCCTCGCATTTCAGTTGCAGTTTCACGTTCTTTTTCTGCTGCCGGATT
ATTCTCTTCACGTTCTTTTAGTGTTAAAAGCTCAATTTCTTCGAATTTTG
ATACAATGTCTTCCATTGCAACCTCAAATTCAGTTGGTTCTTCTGGAGCT
ATTCCAGTTGCTTTTTCCTCATCTGCTTTTTTGcgcttgaaatttttttc
catcaATCCATATCGTTCTCG Run BLAST on NCBI protein sequence of TCONS_00055752-protein >TCONS_00055752-protein ID=TCONS_00055752-protein|Name=TCONS_00055752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
RERYGLMEKNFKRKKADEEKATGIAPEEPTEFEVAMEDIVSKFEEIELLT
LKEREENNPAAEKERETATEMRGQCMETHSETTKRKGDEPATESNSKTKR
TRRSGDDTLCFMREKMNIDKTLKEKELEIAAKREENC Run BLAST on NCBI transcript from alignment at scaffold_258:145090..146060 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055752 ID=TCONS_00055752|Name=TCONS_00055752|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at scaffold_258:145090..146060 (Clytia hemisphaerica)
CGAGAACGATATGGATtgatggaaaaaaatttcaagcgCAAAAAAGCAGA
TGAGGAAAAAGCAACTGGAATAGCTCCAGAAGAACCAACTGAATTTGAGG
TTGCAATGGAAGACATTGTATCAAAATTCGAAGAAATTGAGCTTTTAACA
CTAAAAGAACGTGAAGAGAATAATCCGGCAGCAGAAAAAGAACGTGAAAC
TGCAACTGAAATGCGAGGGCAATGCATGGAGACTCACTCAGAGACGACCA
AAAGAAAAGGCGATGAACCAGCAACGGAATCCAATTCAAAAACGAAACGA
ACAAGAAGATCAGGAGATGATACATTGTGTTTTATGAGAGAGAAAATGAA
TATAGATAAAACTTTGAAGGAGAAAGAACTTGAGATTGCTGCGAAACGTG
AAGAAAATTGTTAGATCAGCAGCAAAGACAAAATCAGGCGATGCTCCAAT
TATTGATGGCTAGAGACACAAAAAACCAATAGATTACTGTATTGTTGGTT
TTGTAATGGAATTTCTTGGCGTTGAAATTATTCTTTATTGTTGACATTTA
CTTCAGttgttctaaaatttgaacgtaGTTTTTAAGCTCTGAGTTGTTTA
TAACTGTCAgactgtttttaacttgtttggACCACATTTAACGCTTAGAA
CAAGTGCCAGTACAGCATTAGATAAATTATCTTGCTTTaagaaaaattgt
tttatattgttcttttcttttgaaaaactgcTCTCAACTTTTTAAGAAAT
GGTTCTTGAATGTATGTGATAGCAGTGCAGACCATGATTTTCCCTTAACT
TTTAGTGCTGTAAAGCCCTAAGACTTAAAGATGTTGTAGGGTTATTTTTT
AGTCCCTATCAGTCCCTATGAAAAGATTGTGtttcttgttttgatttcat
tgatttatcAATTTTCAGTAAAAAGCCAAAGCTGtgttttattgaatttt
ttttgctttactatgttaata Coding sequence (CDS) from alignment at scaffold_258:145090..146060 >TCONS_00055752 ID=TCONS_00055752|Name=TCONS_00055752|organism=Clytia hemisphaerica|type=CDS|length=414bp|location=Sequence derived from alignment at scaffold_258:145090..146060 (Clytia hemisphaerica)
CGAGAACGATATGGATtgatggaaaaaaatttcaagcgCAAAAAAGCAGA
TGAGGAAAAAGCAACTGGAATAGCTCCAGAAGAACCAACTGAATTTGAGG
TTGCAATGGAAGACATTGTATCAAAATTCGAAGAAATTGAGCTTTTAACA
CTAAAAGAACGTGAAGAGAATAATCCGGCAGCAGAAAAAGAACGTGAAAC
TGCAACTGAAATGCGAGGGCAATGCATGGAGACTCACTCAGAGACGACCA
AAAGAAAAGGCGATGAACCAGCAACGGAATCCAATTCAAAAACGAAACGA
ACAAGAAGATCAGGAGATGATACATTGTGTTTTATGAGAGAGAAAATGAA
TATAGATAAAACTTTGAAGGAGAAAGAACTTGAGATTGCTGCGAAACGTG
AAGAAAATTGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055752-exon-scaffold_258-1491911889:145090..146060 | TCONS_00055752-exon-scaffold_258-1491911889:145090..146060 | Clytia hemisphaerica | exon |
| TCONS_00055752-exon-scaffold_258-1510915933:145090..146060 | TCONS_00055752-exon-scaffold_258-1510915933:145090..146060 | Clytia hemisphaerica | exon |
| TCONS_00055752-exon-scaffold_258-1575043694:145090..146060 | TCONS_00055752-exon-scaffold_258-1575043694:145090..146060 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:145090..146060 . |
Blast
The following BLAST results are available for this feature:
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