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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054050 ID=TCONS_00054050|Name=TCONS_00054050|organism=Clytia hemisphaerica|type=transcript|length=1206bp
ACATTTTCGAAGATATATTTTCCAACGTGGGCATCAACTGCAGAAAGAGG
ATCATCAAATAGATAAATGTCTGCATTCTCATAAACTGCACGTGCCAAGG
AAACTCTTTGTTTTTGTCCTCCACTGAGGTTGATTCCTTTTTCACCGATT
TCCGTCAAATCTGAAGCTGGGAGAAGCTCAATGTCGGTCTCTAATGCACA
TgctcttagaatttttttgtatGCTTCATTACGGtaatattttccaaata
aaacATTCTGTCTCAGATTTTTATTCTGTATCCAAGCTTGTTGTGAAACG
TAAGCAATTTTTCCATAAGTTTTCACACTTCCACAAACTTTTTCAAGCTC
TCCTAAAATGGAGGATAATAAAGAAGATTTTCCACTGCCAACTTGACCGA
CCACAGCAATCAATTGTCCTCTTGCCACACCAAGACTAATATCCTTTAGA
GCCTTATCTTCTGGTGTCCAACCAAAACTACCATTGTGAATTTCAATATT
TAGGCTAGCATCACATGGACCTGGCAGCCTTATGTATCCATTAGAATCAA
ATTCTTCACAGTTTAAAAATTCTGATATACGTTTTGCTGATATGTTGTAG
TTCACCACAGCACTAATAAAGATCGGCACAACAGAGAATGGATATCTCAT
AATGTTAAATAATGTTATGCTTACAAAGGCTTTTTCAGCTGTTAAAACCC
CTTTTTCTATGTAAACATAAACAGCAAATGTTGCAAGTGAAACAAAAAAT
GGGAGGCATGTAATTGAAAAATCCCAACTTGCACTCAATATCATGCTTTT
ACGTACAAATCTCAATTCTTGTTTACGAATTTCAGTCACTTTTTGCATGA
AGCTTCCTTCCCAGGCAtacattttgatgattttgatccCAGAAATAATT
TCACTCATAAGTTTTAAACGTTGATCTTTGAATTTTACAAGTTGCTGATT
ATATTTTCGAACAAGTTGGGTGCTCAAATAGTTTATTGGGTTTGAAAGAA
GTATGACCACAAGACCAGCCAGTGTTGACCATCCAATTAAACGAAATAAC
GATAAAAGTGAAACAATGATTAGCAATGGTGCTGACCAGCTGACAACAAG
ATATGTCACGACTTGGTAGCTTCTGTCTGCATCAGTAGACATGAAATTTA
TGAGTTTGCCAGAAGGATATTTGGTGCGGCTCTGGTTGCTCAACCGGAAC
atctaa Run BLAST on NCBI transcript from alignment at scaffold_239:79793..98312+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054050 ID=TCONS_00054050|Name=TCONS_00054050|organism=Clytia hemisphaerica|type=transcript|length=18520bp|location=Sequence derived from alignment at scaffold_239:79793..98312+ (Clytia hemisphaerica)
ACATTTTCGAAGATATATTTTCCAACATGAGCATCAACTGCAGAAAGAGG
ATCATCAAATAGATAAATGTCTGCATTCTCATAAACTGCACGTGCCAAGG
AAACTCTTTGCTTTTGTCCTCCACTTAAGTTGATTCCTTTTTCACCGATT
TCCGTCAAATCTGAAGCTGGGAGAAGCTCAATGTCGGTCTCTAATGCACA
TGCTCTTAGAATCTctttataattttcatttcgATATTGTTTCCCGAATA
ATATGTTTTCTCGGAGGCTTTGGTTTTGTATCCAGGCTTGTTGTGGTACG
TACGCGATTCGACCGCGCGTTATTACGTTGCCAGATAATTTCTCAATTTC
ACCGAGTATTGAAGATAACAATGAAGATTTGCCACAACCCACCTGGCCTA
TAACTGCTATTAATTTCCCTTTATCAATCTTTAAATCAATATTCTCTAAA
ATCTTATATTCATTACACcaagaaaaacagccattttgAATAGAGATACT
TGAATGGTGGTCACTACTTTCGGGCAACTTTGTAATTTGACCGACATCAA
ATTCTTCACTGTTCAAGAAATCTGAAACTCTTTTAGCTGAAATATTATAT
TGAACCAAACAATTTACGAACCGTGGCATAACAGAAAATGGAACTTTCAT
GATATCGAAAAATGCAATACTAACAAAAGCTTTTTTCGCCGTTAGCGTTC
CACCTGCTAGAAAAATATACGTTGCGAACGTTACCAAGGAAACGATAAAC
GGTAAACAAACAATTGAAAAGACCCAGCTCCCTTCTAGTATCATTGCTTT
ACAAATAAGGTTCAGTTCTTCATTTCGTACTTCAGTTACTCTTTGTATAA
AACTACCTTCCCATGCATACATCTTAATGATTTTGATGCCAGATAAAATC
TCATTCATAAGTTTCGAACGTTGGTCTTTTAATTTCATTTGCTGAATATT
ATACTTTCGAACGAATTTTGTTATAGCATAGTTCACTGGATTTGATATCA
TGATGACAATAAGACCTGCTATTGTtgaccaaccaatcagattgaATAAT
GAATACAATGATACCATGACAACCAATGGAGCTGACCATGTGATCatcaa
tgacgtcattaattGAAAACACCGTTCCGCGTCAATAGACACGAAATTGA
TGATTTTCCCAGACGAATATTTGGCGCGACTTCGATTGTTCAATCGAAAC
AtctgaatttgaaaagaaaagaaaagttcaATACCAATCATGCGGATATG
ACAGATCGAATATATAAACTCCGGTtaaggagtttcttaaaatcagtgtt
tttcatttgtaattgtgcgtaaatTCGATTAATCGCGATAGTCGggttcg
atttcccgatctttccggtttgatttcccgatttttgtttgctacttttt
aaaattttatgttagatatattAAGAGATGCTGACCACGATAAAAATGTT
TGCGTAATGGTTCGCTATTCATAAATGACAATTACCGGAGTTTGCAGCCG
TCATTACGgctgtttttattgtttttaaaacaatacttcTAACACTCTGG
AAAATGACCAGAAACGATCTAGCTCACAAAGCCTCCCGAGGGTTGAATGG
TATAATAGTTACAAACTATTTCGGAATTTGGACATTGTGATTTCCCAAAT
CATATCAACAGTCTTAAGCAGACATTAAGAATCACTTAGTGCGGTTGTTG
TTGCGGTTATTTTGCGGCAGTAACCTTTGGActgtttcaaattatttcag
cgAATAGGTTTTAATTAAACAAATTTATAGTATCAATTAGTgcatttttg
ggaaaaaagtaaTATTTGCAGTTGAAATTAAAGCTGTCTGGCTACTCAGG
GTTCTGAATATCTTGAAGAAAATAGTAAAGCGAACAAATTATTTCTGTCG
GTCCTGAGCTGAGAAAATacttcaaagtttttgaaaaattcacttttttt
caaaaactttttactaCAAACCTTTCGATATACGGCACCAATAACTGCCG
TTTTCAAAGACACCCCAATGACGTAACACGACCAGAAATAATTTTGTTGG
AGATATGTTTGGCAAATCAAAGCACCCAATAACGCAAGTGTGTATAAGAT
ACCTTCAGTTCGACTGCTCTCCGTTTGTCCCACTGCATCTATTAACTTCC
TGAAAACATAAATgtaactttcttttataaggacatctaaaatttttgaa
gccttcggattaGTTTAGATTAGTTTCGGATtttgttttaagcctaaaaa
tgttcttaacgtgttcttatttccatcatttttcggtcatttttgcccat
tttcctaagaactcgggtgttttagagtatGCAAACCCTTAAAAggttgt
tcttaacattttagccgtcaaagccttatgctcttatatagtttgttctc
ttataaaaaaaacttgcagAGCTTTATCTACAAGAAATCTTACCCAAGAA
TGTAAGGTGTAGCTAGCAGAAAGCCATCAGcaaacaatttcaaaatacaa
ctcaacaaaaatttacgaCGATACATTCGGACGAAGGCTTTTGTTATCAA
CGGACTGcgttcatttttttcacaatcTTCTTTCACTTCTTTCCATTTCT
GTTGAAAATTTTGGTTGATGTTTTCTGTTGTATGTTCACCTTGCAGTGGC
CATACATCTTTATTTGTTAAACTGCGCCTTGAACCTGTCAAAATCAACCT
ATAAAGGAATGAGAAATAAGCAAGGGAAACAAACATGAGGGTTTAACCAT
ACATAGCTTATACTAGAGTTATTAGAGTATCAAAATGTCAAGAGTTGGAC
AAATGAAAAAGGGAGGGAAAGCCTTATTTGTTTCAAGTCTGACTGAAAAG
TATGTTTGCACGTTACTTTCCAAAATAAATGTTAGAAAGTTATATACCGT
TGCGTTTAAACCGCGAAACGAATAGCCATCACTAGCTTGAACAATAACCG
AATGATGCTGATTCCCATAATTCATTGCGACTATGCATCGGGTAGTGCCT
TNCTGATTCCCATAATTCATTGCGACTATGCATCGGGTAATGCTCGAATG
CATCGtattttgtttgaaagaaagaaattttaccTTGTGACCCACCAAAA
GGTGACGGTGGATAAAAAGTGGTGACCATACATGTCCTTTGGTGATGTGT
ATGGCAATCGAAAGCTCTAAACTAAACTGAAACTGAATGGTTTTCAGTAA
CTAATATAGAAGTGACATTTCAAATTACTGCTATTCTTCTTGCATTGTAA
CAAAAACATGAAATCACGACTATCGCACCGGAGATTTCTGACCTTTACCG
TCAGGGGTGTATAATGAAGCAAATACCGGAAAATGGTAATCAATCTATTT
CAAGTTAAACTGCAATTTCAAATTATCCCATTCAGCGGTTGCATGCGGTT
ATTTTACAAGCATTAATTATATACTTATTTTAATAGTGTATGGAAATTTC
GAAGCAGCAAACTCTCTATCAGTATTGCCTACAACGAAGTAGGAAGACTC
CAAAGCTgacaaacaaaacacaaaaacaacaaTCTGAGACTTTGAGGTAT
CTATGCCCAGTGATTACAAGCAAGATGGTAAAATTTAATTGCGTAACCAT
GATTAATTTAAATGAAGCATAATTTGAACTttaattgatgaaaataattg
TTTGATGATAGGGTTGAAACGTGCTCTAGATACAGAATTCTTTCCTCAAT
TTTCTTAACCTAGCAACTAAACTTTTGTAACCACGATGTTTCACGaggta
aaaaattattcatACGGCACTGATTAGcatgtaccaaactcttcttcgct
aattgaaaagataacgcgAAGTTCGACACACggcaagtttttttcaaaat
acaaaaaacgcCCGTGGGCGGGGTAGGGTGGTACACGCTAGGCACTGATC
GCCTTCTTCCATATTCTGATAGTGACATTTGTTTCCAGCTGAGTCACACA
GAGTCTATCTAACATCCATGAATCTTCAAAATCTTAGTCCAAAAACTAAC
TTCAAATCTCGCTTACCCCCGTCCCCATAGTTTTGTATATCTAATAACAT
TTGAAGTTCAATGTCAACAACTATATGATCAAGGTCGTGGTGATTTCCAT
TGGAGACTTGGAAATATGAATAAAATGCAAAAAGTTCTCACGAGATAAAG
CATTCGACTCACGCTATTTCTAATAAGaataacaatttaaaaaaagttca
accTTAAATATTTCTGATCTTAAATAAATATGTAGatattttcatttcat
attttcttttgatattttcactTCACACTTTTCAATTTGGAGAAATCTAG
TtctttgacgataaaaatggtGTCAAATTCACATCAGAATATGATCAAAA
CACTTTTATCGTTGAAAACCGTTTAACATGGCTCAGATTCAAGGCCGAAA
ATTAGGCATAAGCCATACCAACCCTCGCATGACATGATCATTTAATTGTT
ACATATGTCTAatatacccccttctcacagacccggtaggatttttcagc
cagtggaggtaaaaataacgaactgaaacaCGATGGAGATAGACATTCCC
ACATATTTTATGGCTGGAGatttaaattctattgttctcaagtcagaaaa
ttcagttagtggggtcgtttagcataatttacaggaaaaaaataatatac
aNatatatagctgaaactttctccagaccttctctataggatgcttatac
ctcaggaaaaaatcccctaaaatcccactggtggaacatcccttttttgg
gcaatttcctttttccccaggcaaaaccctaagggcaaaactttttgaaa
ctttgaaactcattttcagacaatatcatgtataccattcgaaagctctc
gaaaaagtatatagaagacttttaaacgggtatagccgatttcattacct
aactcaagatatttCATGCGAAAGTTCCACTTgtcgccacattttggtct
aaaattgaccataaatttcatcttctgcgtgaattatttCGATTATCTTT
TTCCTACAAagcagcctgtatttttgtaacacaacCACACTAAGTGGGAA
Tgggaaaaattgttttatttcattattttcagtggaaaaaaaagttgggg
gataattttccactggggacgatattttggccaatttttccagtgggaag
gagtcccagtgggtctgtgagaagggggtgttttaatGTAAAAACAACCA
CAAAAAGACCAAAATTCATGAACATTTATTATATTCTAATGAAAAGGTTT
TGGTGGCGACTCCCGCATAATTTCGGGCGTTTCCGCATAAAATGATGACC
AAGTTGCGCATGCGCCTTACATAACTTAAATTGTCATCTTTTTGTTTGAG
AAATCAAgtaacattttgattttatatgTTATATATCACCTTTAAATACA
ATTAAACAAGTGTTATGCATAGATTTTAGTTCAAATTcatataataaaat
attttgaaaataaaaagtcaataataattgaaaaattaagaaaaaaaatt
tatgtatGAAGAAAATACCTGCCATTAAACCAAAATCAATTGATTGGGTT
AAATTGAACCGAGTAGGCCAGCATTCTTGACCATGGAATAAAATATTGTA
GTATGATCGGCCAACAGAGTTTTGGGTGAATCGAATTCTGCGACCTCTCC
TTTTTCCATCACCAAAATCCTGATAGAAAAAACAAATTACAATCTGAAAT
TTAGTCAACAGCATCATCGTGTATACACGTCATACACGTTCACTGCCGAG
CCTTTTTCAGAAATCGCAATTTTGACCTCTTTGAATTTCGTCGAAAGTTT
ccatatcaaaagttatggccctTTGGACTACCGATATTGTATACTCGTGG
TTAGCAGCGTAAGTGTTAACCAAATACAGCCCCATGGATTTTAGAAGAGA
TGTGACCCAGAGGGAAGTGTGAAAGTTGTATAAAATATTATAGAAAAATC
ATTGGCAGGCAAAGTTCAGTTAGTCGAACACTGTAAAGGCCAACATAAAC
CCTAACCGCTTAATCCTCCATTTTCTCGGTTTATCAGGACTCTCAAAAAG
CGCCAAGCTCAAGCTAAATTATCTTTGAGCAATGAGCCATAGCTAAGAGC
TACAGAGGAAGCTTCAGTTTTTCTCATTCAACGATATCATTATCAAGGAC
TTATCATTAAGTGCCAACACGTACATATGTGCACATTGACCTCAGTTTGA
TAGAGAACTACTAAACTGAGGATTGAAGTGAGATTCGAACTCACGAATTT
CGCATTACTAGTGCAactgctctaccgactgagctatccAGTCCACGCTG
GAAGCAATTTCTCAGGAAAGCAAGATTTGCACTAATTTGATGGGGACGAA
CGGATTCTTGAATTTAGCGTCTTCTGTGTTTTTGAGCTCCGTGCAACGGT
GTTTGGTGCAGAAATATAAGGCCTTAGGTATAATCATTCTTATTCCAAAA
GAGGCGAATGATGCTGAAAATGTTACTTTCAATTTAACCTAGACGTTTTT
CGACTTAAAATTCCACGCAGCAAATTGCTCTCTCGTTACAACACATTACC
TTTGAATCTATAACTAATTTTTGGGAAGATGANTTTCAATACAATATGCT
AGTTTTTTGGTGAAATCTACCCTTACGGAACTAGCAGAGAAGCTCACCTA
TCATAATCCATGATGGTGTTCAATCGATGTGCGATCGTCAAAATAGTGCA
TCCAGTGAACTCTTTTCGAATGGTTTGTTGAATAAACAAATCTGTTTCCA
TGTCAACGGACGCTGTTGCTTCGTCCATGATGAGAATCTTTGACATGCGC
AGTAGAGCTCTTGCAAGACAAATCAACTGACGTTGCCCAACACTAGGGTA
AATATGGAATAGTTTAGACATTGAAACAAGGCTAGCAGCTTTTAATGAAT
TGATATTTATTATGGTATTCTTAGCTAACTTATTTTTTCGGCCTTGTTTT
AAGCAATGATACAACCCAAATAAAAACCGTATATTTCTAAGTACGGTCGT
GTGTACGAAAATTTGTACAGATTCTAATGACTATTTTGTGTAGTGTTGGA
TACTGTCGATGAATGGGGAATTTTACTGACCTTAAATTATCACCGCCTTC
TTGAACTTCAGAATCTAATCCACCAGAAAGTGTTGAAACAAATTTCTTCA
AACGAGAAATTTCCAAAGCGTTCCAAATTTGTTCATCGGTATGCCGTTGA
AACGGATCAACGTTAAAGCGGATCGACCCCGAAAATAAGACTGGATCCTA
TAAATATATAACGCTTCAaagaataaaataacaaaagcGATCAAAAGATT
GGTTTACTTCTAAGCTAGTCTGTAAAATCAACGAACGACTTGTTAATTGT
GATAAATAGTTAAAGGGGAGGGAAAATGTTctacgcgtttttttataaga
acaaacttttaaagaacataaggcttcgatggccaaaatgctaagaacaa
gctaagaacatttaaaggctttgcagacattatttttcatccgccgctta
accctccttttttctgtcggcttttattatatggggatgaaagtttgact
tcaaatctaaataaatctattctttgttctgNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNcgtttttttttttaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaagactctaaaacatccaatttcttaggaaaatggaccaaaatgc
tcaaaaaatggggaatataagaacatgttaggcttaaaactcaaaaagaa
cattaagaacatccaaaggcttcaaaaattttggatgtttttataaaaaa
agtgtataaatttttttcagagtAAACTAGTTCAAGCCAAAACCCTGTAG
TACATTTCCAATAAGAATTCTACGAATACTTGTAAGGCACAGACAGTATT
TGAACCAGAAAGTTATTAATCAAATTAAATTCTACCTGAGGTATAATGCT
GATCTTAGAGCGCAACTCTTGTAAAGTGACATTTGATATTTTGACACCAT
CAATAGAAATATAGCCTGAAGATGCTTCGATGATACGGAATAAGGCTAAA
GTGATAGAAGATTTTCCAGCTCCTGTTCGACCAACAATTCCAACCTAGAA
GTAGAAAGTAAAACAAAAGGTaaacatgaaaattttaagtttaagtttaa
gttttGAGTTCACAAAAACCTTCAACACAACCTGTAAAACACGgtttttt
aagaacataaggcttcgatggccaaaatgttaagaacaagttaagaatat
cttaagGCTTTGTGATCTCAAAAACACCTTTTTCTCacaatgttaagaac
atttttaggcttaaaactcaaaaagttaagaacatccaaaggcttcagaa
atttaggatgttcttatagaaaaacgtgtattcggTTCTCTGGCACAGTC
TTAACATAACgtgtttgttgaaaaattgatcGATGAAGAGaaaaacttac
tttttcttGTGGACGTATTGTGATATTTATACTGTTCAAAACAAGTGGCA
TGCTGGGTCGGTATCGCACTGAGTAATTGACCAATGAGATTTCTCCATTT
TGTGGCCAATCAGGCGTGACCTCTCGTGAGGGTTGTAACGTTATGCTAGC
CTAGGGTTTACAAGGAAAAAATGTTATTCAGGTCAACTTATTTTAAAGGC
GtttaaaaatagtttgaaaGTGAAAGAGTTTGAAAGACTAGAAACATCTA
GTCCGTCTAGAATTATCGTTCTTATATTTTACTAATCTATTTCCACAACA
CAACGCTGTTCTCGATTCGATAGTGGAACGAATAAAGTCTTGCACTCGTT
CTTTGATTGGCGTAAATTCAGCTAATAGCTTGTACCGTTTCTAAACAGTC
GTTTTAGCTCTTTTACGCTCACGCCCACTCCCACACCCATGCATTTGATT
GACCGCAAATCCCTGATTTAAGACGCTGACgtctttgaccacttggccat
cgcttcTTCTATACATTTGATAAAACGATATTGAAAATGCTACACATATC
ACGATCCACACGGCACCTTCAAAGTCAAAACAGTTAAAAAAATATCCTCT
ATCCTCAACGACGTACCTCTCTCGGTTTTGATATGTAATCATTTATTCGC
TCAATTGAAACCAAGTTAACTTCCAAACCATTCGAAGAGCGAACCAATGA
AATCAAAGATTGCGTCATCTGAAAGATCGAATAATATATAAATAATCATA
ACCGATCTCAACTGTTAGCACAACTATTTACATATTTTTGTCATTAACAA
CGTAAAAACCTTGAGCAAAGAAAAGCTTTCGTACCCTCGGAgagaaaagt
aaataaaaaagcaCTGATTCGGTTTTAAAAAGTCTACACGTCTACTTAAC
TCTGAGCCCTGAATCAGGGTGGGGGCCTTAGAGTAAAACTGGCGATGGGT
ATGTGAGGACGATAAGGCCGAGTTCCTTCACCTTCCAAAGGGTAGgaagt
ttttcaaatatttctctctaagggtcaattttcaatAGGATTTGGTCTCT
CTAGGGGTCGGCTTTGTAAGATCCCGTCTGCCAACCTTAGTCCCCTGGGC
CCCTGGAAGGAACGGTTTAAATCAATTGATTTACCTGTATAGCATAAGAC
ACAGTCAGCCCAAGGATACCTGGTGATATGTTTCCTTTCTCCATGACaca
aaatatggcggtaaagaGAGCAACAAAGATACCAAGCATCTTTATCTGAA
TTAACATCCATCTAAGAACAAAAGGAAATAACATTAATTGATTTTCTTAT
AAACTGTGgcgaatacacgtttttataagaacatccaaaatttttgaagg
cttcggatgttcttaacgttttgagttttaagcctaaaaatgttcttatt
ttgaccatttggagaatatttttgaccattttcctcaaaaatagggtggt
gtttttgagtccacaaagccttaaaatgttcttagctttcattttggcca
gcgaagccttatgttcttatatagtttgttcttataaaaaacgtgtagat
ttAACAAACACTTACCGAAAAAGGATCATCAATATATACAGAGCGTCGTG
TATTCTACCGTCGAAATATCATAAAAAGTATTAGACTCATTAAAAAAGCA
CTTTTTCTTGGAGTGACaccaaaatttgttgaaataCGTGGAAACTTTAT
TGATAATTCGTTGAATTAACAAAGTTGATGGAATAAAGTGCTTTGCTTGC
TGAGTCATCAAGGTTTAAACCCGAATCATTACGGCGAAAACTATCTTAAG
TGGATAAAAGTTGGCGGGGAAAATATTTGGcgaatttaatcaaattaaat
cctcgccaaaattctaaattcggcaattcgccaaattaaatccccgccaa
atttaacaaaaagataattatgtgaaaaatcacaactttttagtatattt
ttgagtaattttcacccatttcagtgtgacaaaacttccaattcgccaaa
ttaaatccccgccaaattttacgaaattgatctatcgccaaattaaatcc
ccgccaaaaatcgtattttggccaatcgccaaattaaatccaggccaaaa
tttatccacttaagttAGTATAAAGGTACGGATACGTATAATCCATATTA
GTGGTTTGAAGAGCAGAACTAAAAACAAACCTGTCACACATAATGTTTGC
AAGAAAGGGTCGCTGCAGATGATCAATCCTTCTGTGGTTTTCGTCGATAA
ATTCGTCTACTTTACCGAACGCTCTTATGGTGCTTGCTCCATTTATACTT
TCCATGAAATGGTTGAAAATTGGCGACTGGTTAATCGAGATGATCCGCTT
CAATTGTCTTGATGACTTGACGTAGATTCTCTGAAGAAGAAAAGATGTAA
TCAGGATAACTTTGAAGATCCATGAATTTTacaatgtcaagatgtcaagt
CAGATCTGATACGCATCTTGTTTTAAACTATTCATCCTGTGTTTAAGATT
CAAAAAGCTTCCCCGGAGACATCTCTAATTCCCGAGCGATGACTTTGGTG
ATTCTGACGCCTGATGTTGTTTCTAGTGTTAATGGTTCTGTTGATATGAC
TGTGGATTTAACTATCCTTTAGCTCTGGTTTAGTCGGCCCCCTTTtagcc
ctgcctattctaattgctaATTAAAGTTGGCATAAAGTGGATCGAGCTCG
CAACCAATGACGCTATACTATTGTTTCGCAAAAGTTGGCAAAGAGTTGGC
GTCTAAAGCTAAACATAGACAGCCCACTTTCGATCCACTTTATGCCAACT
CtagcaattagaataggcagggctaAAATTGAGTCGACTAAACCAGAGCT
TAGAttttacaatcatggtcgtaatatttgagaaaaaagagaaattccta
cgaaatcttataaccacaaacgatttggaagcgctcggaagggtagagtt
ttaactctgagttttccTTAGGATCTAAGGacccaaaagttcaagaatgg
tccaatagggctcagaatatggccaagaagtctataaacccctcccgaat
taaAATACTCGAatgaatttatcaattagcccaaaagcgactttctcgcc
cgaactcccaATTTCggaaaacgaggaaataagctaaattctcaatagat
tttcaCCATGATTTTAGGGTTGAGACTATTGTTAATGTTTGGAGAGAACT
TAAATTGAGCGAAAAACAACAATCAgtaaaaatatcatttgatCAATGAA
CTCCACAACCATCAACTGACAAACATGGATAATCATTGTGAACGACTTGG
AACACTTTGTCGGTTGTGTGGCTCAAAAATAATAACCAGCAGGTTCTATT
GCAACCCCAAGCTGGAATTGAATTGTGGAAAATTATTGCCTGAGGTCAAA
TCTTGTTGCGACCGTTTTGCAAAAGGCtgtatgataaaattttaagcctt
tataaacttttttatttattttattacaCTCGTAAATAAAAGCTCTCACC
TGAGTCAAAATATAAATGACGAATATTGGTATAAAAGCCACCATCACCAA
AGGCGTTGCAAATGAAATCACATATACCACACCTAGAAGGCCCATTCCAT
CGACCAGGCAAGTCCTTAAGTTAGTAGGTATGGAGCTGTCTAAACCACCA
ATATCTTTGGTGAAACGATTCATTATACGTCCAGATGGTGTTGATTCAAA
GAAAGAAATTGGACAATGCAAGATTGTATCCAGCAATTGAAAATGTAGTT
TTTTAGAAGATCTGTAACTTGCCAGAGCTAATACGATAGCTAAAAATAAG
ACAAAGAAACCTTGTGCTAAGCCAAGAAGTCCATACACACTGATTAGTTC
GTTACGATGAAGCTTTGCTGTTATTGGTGATAATGAACTCCAATGTGCTA
ACCAGAACCTCGAACCAACCAACGAAGCTTCTTGCAATATTCCACATGTT
ACGATGACCAGAGATGCAAGGATACCAATTGTCTTCAAATATTTCATGAG
AATTGTCAGCTTAACCTGAAAATAATCACAAAATCTCAGACTTTTTCGCA
GTAAAAGAAATGTATTGAATTTTTTGTGCCTAACAGGGTTTAAGTTCTTG
TCTATTACTGAAATGTGGCCATTaacacgggggggggggggggNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggta
cccttaagggtaggtttttcgagaccctcaaaatgcactgtaagggtgta
cttttgataagtgcactacaagggtcttcttttagctggatacactaTAA
GGGTGTGTTTAGGGACTGCTGAATAGCAAGTCTGACAataaaaatctgat
gtatctttaCGGTTTTGACCCGcatccattttgatttgttttgcacctTG
TATCGACATctcattttcaggtggcttcagcaaaataagatatgaaaacA
AACTTCTAAGGTTCAGAAACTTTCGGTAAAATGGACCTTTTCACTGCTCA
GGGGCTGcattgtaagggtccgattttgtcTGAGTGTATggaatggtgaa
attaagataTGATGATATTAATagcaaataatattttcttacatttccag
tttccactttttcttgctcaattagtttccatttttcattttcagtttca
ttttcatcttcttcgTCCTCAACTACATCATCTGTGAAAAGTTGTTCATC
TGTCATTCTGTCTATTACACGGTACAGATTTTTGCCGCTTGTTGTTAAAA
TACCACCCTGACTATGCAAAGAGATTTGCCCTTGAAACACAGGGTGGTTG
GGTGCTTCTTCGTATATTTCGTCATCTGAAAGGATGCAATAAGAGAATGA
ACATTTAGGAAATCGCTGCCACCGAGTTAAGagtttcaatctcaaaattt
atgtCTCTGAAAACAATACTTTCTTTACTTTGCTAAATTACAATTTTGAA
ATTGATCCTTTTCTCTTGTAGCTTTTCTTCTCCATATACAAGAAAAGGGC
CAATAttctaattttgagattggttCTTTCGCCGCCTCGATGGCAGTGAA
GTGTAGGTGCTATTTTACCAGACAAGATCTTATCAATGAAAAATATAGAA
ACGTAACGATTACCATGATCATCGTCAACCAAAGTTGACTTCTCCTTCTC
AATTGATTGTTCTAGGTCATTGTCATTGCTAGCTTTGGCAAATTGGTTCA
AGATGTCTGCAAATCCACCATTACTTTCTAAAAGCTTTTCGAATGAACCA
tgctataaaaaaaagttaaaaacagtgTGTTTATTGGATTTCTAACAGAC
CAGCTCCCGAGTGCGGGGTAGCACCACTTAGGGGGATCCTAAATTACAAT
ACTATTTTCGTGTTGCTTAATATCTCTAGTTTATGGAATGGAAAGGTAAA
TAGCGTTTTAAGGGGGCTTTTGGTCTCCAGAGGGTCTAAAATAGGAGGTC
ctaaatttccataaaaataaAGTCATCAATGTATACAAAGCTTAGTTTAG
GGCCAACGTAATAGTTCATGTAAcgtcaaaaaaacaaacatgatAACCAG
AAGATACACAAAACTATGCAATCCATGATGAAGTTTTAGTAATTAACAAA
CGTACCTGTGAAATTGTTTTATCTTTGATGACACAAATGTGGTCAACATG
TGGCAAAAATGATAATCCATGAGTCACTAAAACTCTCGtctgaaatttaa
aaagattataaagtATTTTTGTACAACAATACCTCAAGGATTGTAATATA
AGTGTACATATAATCAAGGTCGTAAAATAATATTCAACAacgtttttaaa
ttttttttcattaagaTAAGATAACTATATTAAATTACAAAATAGTCAAA
GGCTTCTGAAATCATAGATCCAAggctacatttttttatgagtaaagaaa
acgTTCATATTTGAAGTATCATGGCATGGTAATATTTAGGTAGATTCGCT
GGAGTTAGGTATTCGGTATTCGGGATTCGGGATTCGCATTCGGGATTCGa
aaaagctcaataaaaacttaatgaaaaaagatattaacttgaaataaaaa
acggatgcatgTACACATACTAAGTAAtaaatccaaataaaaaaaattca
gaatatgagctcagttgtcacgtgactatgggaaattcccctattcggga
ttcaaatcctgtcagggacctttcttcaaaagctcNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggttggattgacttcaaata
aaaaacggatgcaagctcacatgttaaggaaaatattccaaaaaaaaaaa
ttcagaatatgagcttagttgtcacatgactatgggaaattcccctattt
gggagttatttcaatttaaagaccatttttaaaaagctcgccagtcgtca
gtaaatggttgaattgacttcaaataaaaaacggatgcaagttcacatgt
caaggaagacattccaataaaaaaaattcagaatatgagcttagttgtca
cgtgactacgggaaattcccttttttgaGAGTTATTTTAGTTTAGGGacc
ctttttgaaaagctcataaaaactcaaggaagaaaggtatcgacttcaaa
taacaaacggatgcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTc
acgtgactacgggaaattcccctattcgggattcaaattatttcagggac
ctttttcaaaagcttaccagtcatcaggaaatggttggatcgacttcaaa
taactgacgactggcgagcttttgaagaaaggtccCTGACAGGATTTGAA
TCcagaataggggaatttcccatagtcacgtgacaactgagctcatattc
tgaatttttgttaTTGGGATTTATTCCTTAGTGTGTGTAcatgcatccgt
tttttatttcaagttaatatcttttttcgttaagtttttattgagctttt
tCGAATCCCGAATGCGAATCCCGAATCCCGAATACCGAATACCTAACTCC
AGCGAATGTACCTCATGGCATACAGGATAGTAAAATTTTCAGTGAAGGGC
TCTagtcatagtgaaaaatcaatttcagaatttgaagataaaatcttatg
ttttcgcttctttcaTATGTTttagaacaaactgcttttgaaaaagtgaa
tttacatcatgagtaattaaggaataagtgtggcatggaccttaataaaa
cgtcataacgacgctattcatatacttttcacaaaaaagcctaatctcct
cATGGAAATCATTtaattgtttcaaacttttttaaagttaatgacaaata
atttctttatttagattttttcggaaaaNaacttttttttaagttaatga
cgaataatttctttatttagattttttcggaaaaattttctatttagcta
catcccaagttatagctgttttcgtatggaaatttagtggagaaaattgc
caaaaatgaggttttttggagatttcaAAGGAAAGATTCTTCCGCAAAga
ttttccgaaattgtatttttagatactaaatagatacatcacctgaacca
aaaaaaaaataccaaattgtttgatttttaccgagattagggctttgaaa
ggcgaaatactcttcttcgaaaaactcttcgttttctttttcatttaatt
ttttcatttcaatttttcgatttttagattctaaaaaggtaggtttaaca
ggtTATATAAAAAGAtttatacattaatctttttaaaatgcagaaattgc
catttaagttggtgtaaaatcgaaaaattaggTATGTCCTTAACTCGCTT
TCTTTACTCAAAGAAGAATAAATCTCTCTTATCATTAACATTGAGCACTC
TTAGCTAGCCAAACtgatagttgttttggagaacgcgaTGGactattgaa
taactaattactccacaacagttacctagagacaagataatttttcatgt
tttttattggctgagggaaagtaatttgttattcaataggccgTCGCGTT
CTCCAAAATAACTATTTACATTATTTACATTACCTTATCTTTCAATAGGC
CATTCGATCCAATGATATTTTCGAAGATATGTTTTCCAACGTGGGCATCA
ACTGCAGAAAGAGGATCATCAAATAGATAAATGTCTGCATTCTCATAAAC
TGCACGTGCCAAGGAAACTCTTTGTTTTTGTCCTCCACTGAGGTTGATTC
CTTTTTCACCGATTTCCGTCAAATCTGAAGCTGGGAGAAGCTCAATGTCG
GTCTCTAATGCACATgctcttagaatttttttgtatGCTTCATTACGGta
atattttccaaataaaacATTCTGTCTCAGATTTTTATTCTGTATCCAAG
CTTGTTGTGAAACGTAAGCAATTTTTCCATAAGTTTTCACACTTCCACAA
ACTTTTTCAAGCTCTCCTAAAATGGAGGATAATAAAGAAGATTTTCCACT
GCCAACTTGACCGACCACAGCAATCAATTGTCCTCTTGCCACACCAAGAC
TAATATCCTTTAGAGCCTTATCTTCTGGTGTCCAACCAAAACTACCATTG
TGAATTTCAATATTTAGGCTAGCATCACATGGACCTGGCAGCCTTATGTA
TCCATTAGAATCAAATTCTTCACAGTTTAAAAATTCTGATATACGTTTTG
CTGATATGTTGTAGTTCACCACAGCACTAATAAAGATCGGCACAACAGAG
AATGGATATCTCATAATGTTAAATAATGTTATGCTTACAAAGGCTTTTTC
AGCTGTTAAAACCCCTTTTTCTATGTAAACATAAACAGCAAATGTTGCAA
GTGAAACAAAAAATGGGAGGCATGTAATTGAAAAATCCCAACTTGCACTC
AATATCATGCTTTTACGTACAAATCTCAATTCTTGTTTACGAATTTCAGT
CACTTTTTGCATGAAGCTTCCTTCCCAGGCAtacattttgatgattttga
tccCAGAAATAATTTCACTCATAAGTTTTAAACGTTGATCTTTGAATTTT
ACAAGTTGCTGATTATATTTTCGAACAAGTTGGGTGCTCAAATAGTTTAT
TGGGTTTGAAAGAAGTATGACCACAAGACCAGCCAGTGTTGACCATCCAA
TTAAACGAAATAACGATAAAAGTGAAACAATGATTAGCAATGGTGCTGAC
CAGCTGACAACAAGATATGTCACGACTTGGTAGCTTCTGTCTGCATCAGT
AGACATGAAATTTATGAGTTTGCCAGAAGGATATTTGGTGCGGCTCTGGT
TGCTCAACCGGAACatctaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054050-exon-scaffold_239-1491911889:79793..79818 | TCONS_00054050-exon-scaffold_239-1491911889:79793..79818 | Clytia hemisphaerica | exon |
| TCONS_00054050-exon-scaffold_239-1510915933:79793..79818 | TCONS_00054050-exon-scaffold_239-1510915933:79793..79818 | Clytia hemisphaerica | exon |
| TCONS_00054050-exon-scaffold_239-1575043694:79793..79818 | TCONS_00054050-exon-scaffold_239-1575043694:79793..79818 | Clytia hemisphaerica | exon |
| TCONS_00054050-exon-scaffold_239-1491911889:97133..98312 | TCONS_00054050-exon-scaffold_239-1491911889:97133..98312 | Clytia hemisphaerica | exon |
| TCONS_00054050-exon-scaffold_239-1510915933:97133..98312 | TCONS_00054050-exon-scaffold_239-1510915933:97133..98312 | Clytia hemisphaerica | exon |
| TCONS_00054050-exon-scaffold_239-1575043694:97133..98312 | TCONS_00054050-exon-scaffold_239-1575043694:97133..98312 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_239 | supercontig | scaffold_239:79793..98312 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006810 | transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances |
| GO:0016887 | ATPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| biological_process |
GO:0006810 |
transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0016887 |
ATPase activity |
| molecular_function |
GO:0042626 |
ATPase activity, coupled to transmembrane movement of substances |
| molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00054050 vs. Swiss-Prot (Human)
Match: MRP1 (Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3) HSP 1 Score: 367.081 bits (941), Expect = 3.560e-114 Identity = 202/400 (50.50%), Postives = 277/400 (69.25%), Query Frame = -2
Query: 3 LSNQSRTKYPSGKLINFMSTDADRSYQVVTYLVVSWSAPLLIIVSLLSLFRLIGWSTLAGLVVILLSNPINYLSTQLVRKYNQQLVKFKDQRLKLMSEIISGIKIIKMYAWEGSFMQKVTEIRKQELRFVRKSMILSASWDFSITCLPFFVSLATFAVYVYI-EKGVLTAEKAFVSITLFNIMRYPFSVVPIFISAVVNYNISAKRISEFLNCEEFDSNGYIRLPGPCDASLN-IEIHNGSFGWTPEDK-ALKDISLGVARGQLIAVVGQVXXXXXXXXXXXXXXXXKVCGSVKTYGKIAYVSQQAWIQNKNLRQNVLFGKYYRNEAYKKILRACALETDIELLPASDLTEIGEKGINLSGGQKQRVSLARAVYENADIYLFDDPLSAVDAHVGKYIFEN 1193
++N +R G+++N MS DA R + TY+ + WSAPL +I++L L+ +G S LAG+ V++L P+N + + Y +K KD R+KLM+EI++GIK++K+YAWE +F KV IR++EL+ ++KS LSA F+ C PF V+L TFAVYV I E +L A+ AFVS+ LFNI+R+P +++P+ IS++V ++S KR+ FL+ EE + + R P N I + N +F W D L I+ + G L+AVVGQVG GKSSLLS++L E++KV G V G +AYV QQAWIQN +LR+N+LFG Y+ +++ACAL D+E+LP+ D TEIGEKG+NLSGGQKQRVSLARAVY NADIYLFDDPLSAVDAHVGK+IFEN
Sbjct: 410 ITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMVLMVPVNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLKKSAYLSAVGTFTWVCTPFLVALCTFAVYVTIDENNILDAQTAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRPVKDGGGTNSITVRNATFTWARSDPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKGSVAYVPQQAWIQNDSLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEN 809
The following BLAST results are available for this feature:
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