Blg03216.0 (mRNA) - B. lanceolatum

Overview
NameBlg03216.0
Unique NameBlg03216.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:3534206..3536790+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03216.0 ID=Blg03216.0|Name=Blg03216.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2585bp|location=Sequence derived from alignment at Sc0000020:3534206..3536790+ (Branchiostoma lanceolatum)
ATGCGTATTATGCGTCGGGGTACTTCAACACCTATACATGACGTGGACTA CAGTATGGACTCCTACGACCCTAGCGCCGACATGTTTGACGATGCCCAAG GATACGATCCCAGCGCTGACATGTCCGACGAGTCACCAGACAAACCAGAT ACTGAATGGGATCCCAGCGCTGATATGTTCCCGTCAAGTTTAGAGGAGTC GACGGACACAAAGGACGACAAGCCCGACGACCTAACAGCCCCGGATGGTA GCCAAACAGAACCGCTTGATCACAGGACTGTGATACCAGAGACACAAGTT CCCGGACAAACAATACAGCCATTTCCAAAAATTTGGCTCGCCCCTGAGGC GTCGCCAAAAAGGGAGGTATATGTACCGACGGAACCAGAACCCATGGATC TAAGAACCGTTATACCGGAGACGCAGCTTGAGTAAAATTATAGTACGGAA GCATAACGTACGGAAGCATAACGTAAGAAACTTTGTACTTTGTAGAATAT GTTGGTACGTGTTCGTAGTGCCATGTGATTTCTGGAACTCCCTTTTGTTT CCACGTGATTTGCTGTCTTTTGTAGTAAAAGGACATGGTTTTCCGCTAAG AAACTTTTTCTGTCGTATATTATGACATCATGTAACCATACGTCTCTTGT CTTGATTTTATTAAAATTGCAAATAACGATCTGTTTTCTTTTTTCATACA TCACGATAAAATCGAGATTAGTTTTAACACATTGTGCAAATATATGTGGT TAAAAACCTTATTCGCCGTAATATGTTGATGTTACGCATAATACGCATAG TAGGAACTACGCTACCCATGCTACCCATAAAGTAATGAAAGATCTTGTCA AGACAATTGTGTGTGTGTAAGCAAAGGTGGTTTCCATGGAAGCGCATGAT CATGAGGCTCATGAATATTTAACGTCCCCGCTCTGATTCGCTACCCCCGT ATGCGGGGCGTGGTGCCCGCCGCCAATCGTTTTTCCGACCGGCTTGCTTC CTGTGGTGCGGAGCGGCCATAAATCACAGCTGTCCGATGGAATAATAGCA AGGGCCATTCCAGAACCCCGCGCGAGAGATAATTACAATAGAGGCCTCTA CCAGCCTTCAAGAAAACCGCCCTGCGTCCACCAGCAAGAAGGCTGTGTGG AACAAGTATTACAAATAGAAGGTACATCATGAATGTCCTTATCTGGAATT GAAAGATTTTCAATGCTATTGTTTTTTTACCTGTATTAATATTAGGACTG AGGTGAGTTGAAAAACCATCGATCTATGTAAAATCTATATTTCATACAAT AAATACATGCACATATATATATAGTAAGATAGCAGATTAGGTAATAAGAA ATCTGTGCATAGTATAAAGTGTGTTGTACATAATATATTATGTTTGTACT GTATCAAAATATAACTATCTATTCCAGGTGACAACTCAGATTGCGGAGGT CCCTTCTCACACCCAGTCCATGGCGTCCAGAGTAAGAGGGAGCTCAAGCA GCGACATGACGTCCCGACACTCACTGACCATGAAGCCACCGCTGCATTTG CAGAGCTGAGGAAAATCTGCCCAACTGCTGGCGCTAACTTGAAGGAAGAC GATGACACAGACACAGCATCTGAGGGGGAGGCAGATGTAAATACTGAAGC TCTCCCTCCTGTCACCTACAGAAGGTCTCCATCAAGCGACGTTGACGAAG TACGCTTCGTGCACGCAAGAGCAAATGAGCACCCTGAACAGTACAACTGT AGGCCTGGCTAGTTCTGCGCTGTGGGGCGCCTAACATCTACGTCAATGCA CGATGTCCTTCATGCAACAAAGCCCAGTTCTGTCGTTCGCAAGATCATGC AGTATGGCTATAAAGATCTAAGTAAAGTGAGTCAACTTAAAGAAACCTTG TCAATAAAGACTTTAGCCTGTAGTATTTGCTACCAGACCTTTATTGAGGT CTAATCAATGCCAGACTTTCTCATATTCATTTGTACTTATACTTGTATTC AGTTCTATGAAGGCAAATCTAAATAGGGAATTTCACTTTCAGGTTCCAGC TACAGAGTGGGGGTGGAACAATAGGAGAAGGTGAGGCAGTGGTACAATAA AGAAATCGCACGTCACTGCAAGGAGCTGAAAGTGGAGAGAGCAGGACTCT TCATCTACAAAGATTTTCATTTCATACGTACAGCTAATCTTGCTACTACG CAATGTCTAATTGACTTTTGAATTTGTTTGAACGAAGCTAAAAATTCCAA AGAAACAGTTAAGGACATCATCTGGGTATCGTTTTATTTCCACCCCGCGT CGATAATTACGTAGTTCTAGTCCGATTTGTCCGCCATTTGTTTTCATGCT TTGAGTGATTCGAATCCTGGTATGGATCCCATGTTATACTACATGGTAAA TACTAGGTACATACTTTCTGGAAGGGCAGATACAAAACATTGAAGTTGCT AAGAAAGATGGGCTTGTGTTTGTTAAAGCAAGAGTGCTGGCCAGCATGAA GAAGAAACGGTACAAGACGATGGTCGTGTTCGGAGATGGAGACGGCGATG TGAAAGCAGCAGCCTATGACTGTTCTGCAGGGTGA

Coding sequence (CDS) from alignment at Sc0000020:3534206..3536790+

>Blg03216.0 ID=Blg03216.0|Name=Blg03216.0|organism=Branchiostoma lanceolatum|type=CDS|length=657bp|location=Sequence derived from alignment at Sc0000020:3534206..3536790+ (Branchiostoma lanceolatum)
ATGCGTATTATGCGTCGGGGTACTTCAACACCTATACATGACGTGGACTA
CAGTATGGACTCCTACGACCCTAGCGCCGACATGTTTGACGATGCCCAAG
GATACGATCCCAGCGCTGACATGTCCGACGAGTCACCAGACAAACCAGAT
ACTGAATGGGATCCCAGCGCTGATATGTTCCCGTCAAGTTTAGAGGAGTC
GACGGACACAAAGGACGACAAGCCCGACGACCTAACAGCCCCGGATGGTG
ACAACTCAGATTGCGGAGGTCCCTTCTCACACCCAGTCCATGGCGTCCAG
AGTAAGAGGGAGCTCAAGCAGCGACATGACGTCCCGACACTCACTGACCA
TGAAGCCACCGCTGCATTTGCAGAGCTGAGGAAAATCTGCCCAACTGCTG
GCGCTAACTTGAAGGAAGACGATGACACAGACACAGCATCTGAGGGGGAG
GCAGATGTAAATACTGAAGCTCTCCCTCCTGTCACCTACAGAAGGTCTCC
ATCAAGCGACGTTGACGAACTACAGAGTGGGGGTGGAACAATAGGAGAAG
CAAGAGTGCTGGCCAGCATGAAGAAGAAACGGTACAAGACGATGGTCGTG
TTCGGAGATGGAGACGGCGATGTGAAAGCAGCAGCCTATGACTGTTCTGC
AGGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03216.0Blg03216.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03216.0-exon-Sc0000020-1570713199:3534206..3534452Blg03216.0-exon-Sc0000020-1570713199:3534206..3534452Branchiostoma lanceolatumexon
Blg03216.0-exon-Sc0000020-1570713199:3535633..3535904Blg03216.0-exon-Sc0000020-1570713199:3535633..3535904Branchiostoma lanceolatumexon
Blg03216.0-exon-Sc0000020-1570713199:3536255..3536285Blg03216.0-exon-Sc0000020-1570713199:3536255..3536285Branchiostoma lanceolatumexon
Blg03216.0-exon-Sc0000020-1570713199:3536684..3536790Blg03216.0-exon-Sc0000020-1570713199:3536684..3536790Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:3534206..3536790 +
Properties
Property NameValue
GeneIDBlg03216