Blg03284.7 (mRNA) - B. lanceolatum

Overview
NameBlg03284.7
Unique NameBlg03284.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000020:3036440..3040313-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03284.7 ID=Blg03284.7|Name=Blg03284.7|organism=Branchiostoma lanceolatum|type=mRNA|length=3874bp|location=Sequence derived from alignment at Sc0000020:3036440..3040313- (Branchiostoma lanceolatum)
CCTGATGAAATTATTTTCGGAAGGAAAAGATGACTTGTTTCTCTCTATCA
CAGATCTACCAGGCATGGCTGGATAAGTCCACTCCACACACTGTGGCCAG
ATGGATCTTCACACTTGTTGTCTTCATCTCATATGCCATCAGAGTCTATC
TTCTAAAGGTACAACATGTAGGGTCTATTACTGTAGATGCAGAAATGTTC
GCGGTGGTTTTATGTTCGCGGTGAACTCTTTACCTCAAACTTAAAACCAC
CACAAAAAGCAGGTCCATTGTGTGACTGTAGCACTTCTATCGTATCAAAT
GCAAACACAAAACCACCGCAAACACTCTCAGCATATTCTTCAACGCGAAA
TTAAATCCCAGTGAAGATTTCTGCATTTACATTTACAGTAATAGCTGGTA
TTCTGCAGTGTATTTGTATTTATTAGCAATGAAACAAGTCATTACACTGG
GTCAGCCAAGGCAGCTCTTGCTGGTAACGACTGACCCACAGAAATGCTGA
CGAACATACAACTTAACCTACAAGTGATAGAATACAATAGTCATTGATAT
ACCAGAACTCTCCACAAGCAGAAACAGGTGGCGGGGCATTCAGAATTGTG
TATATAATGGAAGAACCTCATCTATATTCCGTAAACATACAAGGCTTCTG
AATCATAATGATATTGTTACATACAAGAAGACTATGATGTCTTGGAATGT
CTTTAAAACAAAATGTTCACATGACTCTGCTTATACATGTAATCAAATCT
GTAAAAGAACATAGGGATTACTGGTAGTGTTTTTTCCACAGCAAATGTGT
GTGTACCACATACAGGTTATAGTATTTGTACCTTTGATGACAGACTAATC
ATTGAGTATTACCTCTACAGGGTTGGTACATTGTGACATATGCCCTGGGG
ATCTACTATCTGAACCTGTTCATTGCCTTCCTGTCACCTAAAGTGGACCC
TTCCATGGAAGACAACGGTCAGGGGACATTCTCTTGTCATTTAGTAACAA
ATGTTGGTCTCTAGATTACACTTACAGTTGACTCAATGATAGAGCTACTA
TAATACTATAATAACAGTGTCGAAGTAAGCAAGCAAGGGCACTGAATATG
TTTTTAAAAGTGGTAAACCAACATGTTTCTTTTAACCCTTGGAAACAGTA
TGAACTTAGTACTGCAACTGTGTTTGTGTAGTAAAACACACCCTGCCTTA
CTGCCCTTAGGCTAAAAATCTGTACTAATCTTATACTTGCACAGCATATC
ACCCTCATCATACCGGTATCACCCTAAACTGACCAAATAGTCCAAAATGT
TGTGTTTTTACAGAGGATGGACCGTCGCTGCCTACCCGATCCAGCGAGGA
GTTTAGACCCTTCATCAGAAGGTTACCTGAGTTCAAGTTCTGGTAAGGGT
GACATTAAGTTTGAAGACTTAGATCAAGTTAGATGTAGATGTCAAAAGTA
GAGTTTATAATCTTGTACTTCTAAAGCAATAGCATATACATGTATTGTGT
CTATCGGGAAATGTTGTCATACATGTATGACCAAACATAATGCTGGTTAA
CTTTCTCAAATCACCTGTTCTCCTTATGATGTTATTTTCCCATCTGCAAT
AGTCCAGTCTTGAACCATTTGAAGTCACTTCCACCAGGCCCTCCTACGAG
CTAATGGATCGTAGAATTCATCAGAAAAAGGAATAATTAGCCAGTAGAGT
CAGTCCATGGTGAAGATCACATTTCGCCCGCGTAGGAGCCTGCAAATAAA
ACCCTGGCAAATATTCTCTCTATACCCGGCGTAGTTAGTCTTGTAGAGAA
GTACATTTGAAAAGTAACTACCAGTTGAAGAGATATACATGTATACAGAA
CTATTTTAATAATACTTATTAAGTGCTTTTCAGCAACATGTATTTTCTGT
GTTTTTGTAGGTACTCAGGTACAAAAGCTATCGTTATCGCGATGACGTGC
ACGTTCTTTGAGGCGTTCAACGTGCCGGTGTTCTGGCCAATCCTGGTGAT
GTACTTCATCATCCTCTTCTGCATCACCATGAAGAGACAAATCAAGGTGA
GGTGCCCATCTCAAAACTTCATCACTACTTCTCAACAAAATTTGATCCGT
CTCAAAACATCATCAGTACTTCTCCACAAAGTTTGATCTGTCTCAAAACT
TCATCAGTACTTCTCAACAAAGTTTGATCCGTCTCAAAACGTCATCAGTA
CTTTTCAGCAAAATTTGATCTGTCTCAAAACTTCATCAGTACTTCTCAAC
AAAGTCTGATCCGTCTCAAAACGTCATTAGTACTTTTCAACAAAATTTGA
TCCATCTCAAAACTTCATCAGTACCTCTGAACAAAGTTTGATCAGTCTAT
AATGATCTGTTGAATTTTAAGAGATTCAGCAGAAGTTTTAATACTGTACA
AGATTAGCCTGGTAACTTTTTGTCCAAAGCTGCTGAGACTCTGAGCATTT
TTTTTGCACATTATGATTTTTCTAACACTTTGCATAGAGAAAGAAGAGAC
TGGGCAATAGGTTTGGATACCAGGCTGACAGTGGAAAAAGACAAATGGAT
TTTCAGCAAATTATTCTGTAACACCTGTTTGTTGACTTCTTTATGAAGAA
CAAGTTACTATGTGTTTCACTTATTGACAGACTAACATTGCATCTATATT
CAGTTCACAAAAAAAGCATCATCCTTGATATTTGATCCCATAATTTGCAT
ATACATGTATATTAGATATTTTATAACTTTGAAACATGCTCAACCTGTAC
ACAAGTATGTCTGTAGTTTCTGTAAAAATTTTGAACTGAACACAAAAATT
GGACTTACCCAAATTTTTGACTGTACAGCTTTGTTAAGCGGTGTATTGCT
CACTCCTTGACAAAGACTGTAGTTGTACTAAAATTTGAGCAAGTGCGATT
TTTGTGTTGGAAAATAAAGTTCAAACTTATCCAAAATGACTTCTACCAAC
ACAGATGAACTTTCAAGCTGTGTCTGTATTTTGTTCTACTGTAGCCTTGA
TCCCAACAATTGAATGATAAAAGTTTCCCTACGTTTGTTTCAGCACATGG
TCAAGTACAGGTACCTCCCCTTCACCCACGGCAAGACCAAGTACAAGGGA
AAGGACGACTCTGGAAAGGTCTTCTCTAGTTAGGTATACTTAAGAGAGTA
TCTTTCTTTCTGTCGTAACAAGCTCTAGGCACTAATCTCTTAGTACTTTA
CGTGTAATTGTTCATTACATGAAATCTCATTTACATGCCATAAACATGTC
ATAACTAGATACTAACCCATATCATCCTGCCATGGATAAAATACATGTTT
TTTTATTAGTTTTGATATGAAAAAAGGTGATACAACAAAAATTGTATACT
GAAGTGTTGTATGTAAAGATTTGAAAAGTATGACAGAAATCGGTAGGACA
TATTTCGCTTTATAAGTCTTTTGTTAAAACTACACAAAACTTTGTTGTCA
ACATACATGTTTAGGTTTGTAATTAGCCTCATTAATTTCTCCTATAGAAA
GTTGGCAAGTTAGATATGTAATGAAATGAAAAACATTTAATATCATCTCC
TATGCTTTTTTGTTCACATTGTATCTTTGCTGTGTTTCGAAAACTGACAA
GCTGATTTGTTTCTTTGATATTTTCAGATAACTGATGTCACAGGGGAAGT
TCAAAGGATTTGAAGAGGAAAACACTTCATATATAACCTGTAGAAACATC
TGATTGTTTTTTCTTATGGTACAGTATATCTTTTCTGTGCCCATTTAAAA
AGTTACTGTGTTGTCACCCAAGGAAAGCTATTATAAGCTGCAGGTAGAAT
TGCCACAAAAACGTGGATGATATTGAATTGAAATGTAAGTATGAAAATCT
CAGACTCATGCCAAAATTACCTAT

Coding sequence (CDS) from alignment at Sc0000020:3036440..3040313-

>Blg03284.7 ID=Blg03284.7|Name=Blg03284.7|organism=Branchiostoma lanceolatum|type=CDS|length=531bp|location=Sequence derived from alignment at Sc0000020:3036440..3040313- (Branchiostoma lanceolatum)
ATGACTTGTTTCTCTCTATCACAGATCTACCAGGCATGGCTGGATAAGTC
CACTCCACACACTGTGGCCAGATGGATCTTCACACTTGTTGTCTTCATCT
CATATGCCATCAGAGTCTATCTTCTAAAGGGTTGGTACATTGTGACATAT
GCCCTGGGGATCTACTATCTGAACCTGTTCATTGCCTTCCTGTCACCTAA
AGTGGACCCTTCCATGGAAGACAACGAGGATGGACCGTCGCTGCCTACCC
GATCCAGCGAGGAGTTTAGACCCTTCATCAGAAGGTTACCTGAGTTCAAG
TTCTGGTACTCAGGTACAAAAGCTATCGTTATCGCGATGACGTGCACGTT
CTTTGAGGCGTTCAACGTGCCGGTGTTCTGGCCAATCCTGGTGATGTACT
TCATCATCCTCTTCTGCATCACCATGAAGAGACAAATCAAGCACATGGTC
AAGTACAGGTACCTCCCCTTCACCCACGGCAAGACCAAGTACAAGGGAAA
GGACGACTCTGGAAAGGTCTTCTCTAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03284.7Blg03284.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03284.7-exon-Sc0000020-1570713199:3040156..3040313Blg03284.7-exon-Sc0000020-1570713199:3040156..3040313Branchiostoma lanceolatumexon
Blg03284.7-exon-Sc0000020-1570713199:3039347..3039443Blg03284.7-exon-Sc0000020-1570713199:3039347..3039443Branchiostoma lanceolatumexon
Blg03284.7-exon-Sc0000020-1570713199:3038922..3039000Blg03284.7-exon-Sc0000020-1570713199:3038922..3039000Branchiostoma lanceolatumexon
Blg03284.7-exon-Sc0000020-1570713199:3038268..3038403Blg03284.7-exon-Sc0000020-1570713199:3038268..3038403Branchiostoma lanceolatumexon
Blg03284.7-exon-Sc0000020-1570713199:3037181..3037270Blg03284.7-exon-Sc0000020-1570713199:3037181..3037270Branchiostoma lanceolatumexon
Blg03284.7-exon-Sc0000020-1570713199:3036440..3036686Blg03284.7-exon-Sc0000020-1570713199:3036440..3036686Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000020genomeSc0000020:3036440..3040313 -
Properties
Property NameValue
GeneIDBlg03284