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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:2968156..2976032+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03280.2 ID=Blg03280.2|Name=Blg03280.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7877bp|location=Sequence derived from alignment at Sc0000020:2968156..2976032+ (Branchiostoma lanceolatum)
CTTCAGAGTAAATTGAAGAAATTCGACCGTTGCCCCATATCAAATGTTAT
GAGAAAGCAAAAAAAAAATCTCAATGGTGCTTCTATTGTATCACTTCTTC
ATACTAAATTGAAGAAATTCCACTGTTGCTTCGTATCAAATGTTATGAGG
AAACAATAACTCTTTAAAATTGTCGTTACTGACAAGGAAATGTCCATGAT
CAAAATAACCTTATTACAAAGTATTTGCCCAGCTGTACAATGACATCTAG
TTGCTCCCAGGCTTGTGGTCCGCTTATTGGGTCCAGAAGAAAAACAATTC
AATCAATTTTGCATCCACATTATAAATAAATATACATTACACTTAAAAAT
TATTCAGACGTCATGTCGATATATTTCTTTTACAAAAACGGCTACGTATG
AGGAAGTCAGCAATAAGTGTTTTTTAACATTCTGAAATTTGCACAGCACT
CTTTCTATTATACGTGGAGTTTCATTGGTGCTATTTTTGTAGAACATGTC
AGTATAAAAGCCAACTGTACTCAGAGTCCGAGTTAAAGAACATATTCGCC
ACTGTGAGCGGTGCGAATCGTCAGTCTTGCATCATGGGCGGGTAAGTTGT
ATTTTTTTCTCAGTTTTTTGCCTGATTTGCATATCTCTGTCTTGATGGTG
ATAAACGCATGCTAAATTGTATTTGATATGTTATATATGTCTGAGGTGTT
GATGTGTCATTACGTTATGATCGTTTCAGAAACATTGCCGCACCATGTCT
GGGTTTTTGCATATTGGCATATTGTATTTGATATACTTTATATGTCTGAT
CCCTAGGTGTTGATGTGTCATTACGTTATGATTGTTTCAGAAACGTGGCC
GCGCTATGTCTGGGTTTTCTTCTGTCGTTCCTACCTTGTCCATGGGGTGA
GCTATAAGTGCTTGTTGTGATGTACAAATGAGGCTACAAAAAAGTGCGCG
CGCGCGCGCGCGCGCGCGCGCGTGTGTGTGTGCGTGTATGTGCGTGTGCG
TGTGTGTGTGTGTGTGAGCGATTGTGTGTCTGTGTATGAATGTGTGCGTG
TCCGCGCGTGTGTGTGCGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGAGTGTGCAGGCTATTGTAATATCATTCTATCGTGAA
ACCCTTTAATCAATGGCAAGTTTACGTTAACAGTCTCCCTGTTTTCCATA
GCTGAAACCTCTCCATGTCCGTCCGGATGGACTGGTCCTTCCTGCAAGGA
TTGTGAGTATTCCCGCAGCTTATTATAGTTCTATTTTTACTCATTTTAAT
GTATCCCTCTAACCTCACTCATGGCCTAATGCTCCCATGGTTAAGCATTT
AGTCCAGCGGCATAACTAAAAAATTGTGCAAATTTGTCTAAAAGCACCAA
ATTTGGCACATATGTACTTTCATGTATTCTTAACAAGTCTAGATATGGAT
GCATCTCAAATTCTGCTCAGAATCAATTACAGGGCATTTGTATATTTTGG
GGTCCTGTGCCCTTGTATTGAAACGAAATGACCTAAAATTTGGTGCAGGG
ATGAGTATGACATATGGACTTCAATCAGATTTTCATATCAACTGGGCTGG
CTAAAAGGGAATTTCTCATACGCAGCCGTTTACTTGTTGGGTAGGTACCC
TTTGAGGAGTGTCCCCCACTCGGAGTAATACATGAATGAGACCTCCAGTT
TCGTGCGACGGACGGAGCCAGGGCAGTTACCCCGACCCTAGCGTCTGTCA
CATGTACTACACCTGTGTTGACGGGTACCAGGCACCGTTCCACATGTCCT
GTGGGCCTGCCGGTTGGTTGGCCTTCAGTCACGTGACCCAGAAGTGTGAA
TGGCCCCAGGATGTGCCCGGATGTGGACCCAGTCCCTTCGGTTTGTGATG
GTCTTCATGACATATCATCACTTATACTCCAAGTATCAACTTGATTTGTC
TCAAGATTTTGTTGCTATGTAATACAATGAAAAATACTTATCGAGAAGAG
TAGGGGTGACCCGGTGTGCTTGGCTAAACACGCAAGCCATAGTGAAGACG
CATAAAGCGTGAAGCTCAGTCTGAAGTTCGACCGCTTTTTCTAATACACG
TATGTACTGTAAGCGAGCTATTCTGTTTTTGGCGGCGCCTCAGGGGTGAA
CCTAATGGTATAGTATTGTGTGCAGATTGTATTAATTCTATTTAAGATGA
GTTTTAGACAGGCAACAACATGTCGTACTGATCCACTTTAGAATGATTAT
GTACAGACAATAGCTGTTCGTTTCTAATCAACGGTTCCCTTTCCTTACGA
CAGGTATTCTTGGTGTGTCCACCTTTGTGAACCCTGATGACCCCCTTCTG
GTGGAGGTGGCCACTGACGACGGCAACGTCATACAGGTAAGAACAAAAAC
AAAATCTAGGTTACAATCATTCAATTGCTATCAGGTCTTTCCGCTGCCTT
GACTAGTTGCCGGTATTGATTCAAAATGGGAGATGAACATTTCCCATCTT
GGCCTTAACTTGATTAGATACAGCCAATGGCGGTATGCATAAAGCTTTTG
CCTCTTGGTCTTTTCTAGCCCAAAGCTGGGCTATGTGAAAGTTGATCTTA
TTAGACTTCCCGCCTTCTGTAACCCGCACATGTGCATTAGGCCCCAGGGG
CCGCTCTAAACAGGCGTAGTTTTCCTTTCTGATGCATGTAGAGGATCGTT
TATGAATACACGCTGTTCTACAAACATCTGTGTGCGTGTATCTTTCCCTG
GTTTAGAGGGATTTAACTGTGGATACTTTTCCACCTGCAGAGTAACAATA
TAGGCCGATCGATTGAAAACCTGAAACTCTCTTTCATACATTTATCAATA
GGTCCAAGGAGACAAGACAGAGGAAGGAGCCGCGACCTCTGTGGAGTCCC
TAACCCAGACCTCAGCCGGCGGGGACGAGACCACAGTCGGCTTCTCTCCG
GACAGCGCCCTGGTCGACACCGTGGTGACGTCATCAGGAGTCTCCATGAC
GTTCGTGTGGACTGATGACAAAGTCTACGTCACCGCTTCGGCACAGAACT
CTAGTTTCGAGCTCAATGTGCAGGTAAGGCGTCTCCATGGTTGATATAAA
ATCGATAGTGTCATATAAGGCTTGAAATTTGAGTGTCTTGATCTAGTCTA
AACGTTGCTTAGGAAAGAACTTTAAAAGTCTTTTTTCAGAAGAGATCTGC
ATTACGGCTGTCATTCACAGATCTAGCTTATGCTAAGGTCACAATTGGAA
AAAGGGACCCTGCCAGGCAGTTTACGGTTGTGTTTTTTGTGTGCACTTTC
GGCCGTTACCCCTACGTGGCCCCTTGGGGCACCCTGTGGTTACCGGGCTA
TTTTGGGTCACGGCCGGGCCCCTGGAAGTTTTTAACACGGGGTTAAAATC
AACCCGGGACCCGGTAACAAACAGGCGCCGTGATCTAATTGTGAGAACAC
CGAGAGGTATCCTTGTGGTGCCCGGTAGTTCACTGGGATAAATCTGTGTC
TCCGGGGCCCGACCGGGGCTACACCCCGTTCGAGCACCGGTGCAAATGTA
CCCTGGGAGAGCAGACACCGTATATCGGCGCGCCACCAAGCACCGGTACC
GCACGTGCGCCTAAGCTAGCTAGCCGAGCTAGCGGAGCTTGGGTTTACAG
CGGAGAGTGGGGCGGGGTCGGTCTTCGGGGGCAGCGGGAGGGTGGGCCGG
GAAAGCTTAGGCGCGCGTGCGGTGCTTGCTGGCGCGCCGATATACGGTGT
CTGGTCTCCCAGGGTAGTGCAAATGTAACCGTAGATTATTACCAACTGCT
GCCTTTGTAGTTACTATAATGTCCCTGGTGTGCCTACCACAATAACTCAG
AATACCCTCTACTTTTAGGTTGACCTGGAGCCAAGTACCTTGACACCCGG
GTCACCCATGTCTGAAGTGCACGGAACGGCAGCCCCGATGTCTGCCCCAC
CAGTCGACCACTCGTCCTCCAACAGCGCAGCAGACTCTGCACAAACTGGA
CTGACGAGTATCCATGGAGACCAGACTACAGGGGAGACGGACATGCCGCC
CTCGGAGTCGGCTCCCGTCGTGGCGGCGCAGAGTCTCAGGCTGCCCGTCC
TGGTCACCAGGTGCGGCCTGCCAGCAGACGACGTGACTGTCAAGGCGTTT
GGCTACAAAAGTATGTCGTTTGTTGTAAAGTTTATATTTCCTGTCATTTT
TGACAAGTGTGTGTGCGCGGACGTGTGTGTGTGTGTTATGTGTCTGTGTG
TATCTGTGTCCACATGTATGTATGTGTGTTCGAAAACATACTGAGCTGTC
TAAAAGTCGTATACGTAGTTTTCTTACGTTTTCTGTAAGGTTCTTATCAT
GAAGTTGCCCTTGTGTCTGTGTGTATCTGTGTCTACATGTATGTATGTGT
GTTTGAAAACAAAATGAGCTATCTAGAAGTCGTATACGTAGTTTTGTTAC
GTTTTCTGTAAGGTTCTGATCATGAAGTACCCCTTGTGTCTGTGTGTATC
TATATCTGTGTCTACATGTATGTATATGTGTGTGAAAACATGATGAGCTA
TCTAAAAGTCGTATACGTAGTTTTGTTACGTTTTCTGTAAAGTTCTGATC
ATGAAGTGTTCCTTGTTCTACAGTGTCCAGTATCACGCCGCTACTGACCA
CCGACGTTTCGTCCTTGGACCCGGACGTGGAGTACCGAGTTGTCCCGACA
GGGGACGCTGGGAAGTTCGAGATCGTCGTGCCGGCCAGTCCCGCGGATTC
CTCCCCGGAGGCGGCGCAGACCGTGTGCGACAGCGTCAGTCAGGTGGTCG
GGGGCGTGTGCGCCGCGTCGCTGAACGTCAGGCCTGCAACGGACGGCGCC
ATCTGTAATGAGGTCGCGGACGCCGCGCAGTTTCTCACGACTCAGTCAGG
TCAGAGAAACACATTTGTTTGTCTATTTGTTTGTTAAATTTCTCCACACA
CATGTGTATGGGATGAGCGAACCGCATCATGGCGCAACACACCAGATTTG
AACTGACGAGTACAATCTGCATATCCGGACAGATTTATTTGATCCACACA
CACCCGGAAGGACCCCTACTCTTTTCAATAAGCGTGGTGGGTTCTTTTAC
GAGCTCGAGGTGTGGCTCTCCTCAAACACGGGACCTCCATTTAACATCCT
ATCCGAGGGACGTCCCTAACCGAAGCTAGGTACTCATTAGCGGACCCCGG
ATCTGCGCCAAGCACCCTGCCACTGCGCCACCGCGACGCCACTAGACGTG
GGTAGGCGTTGGGAAAATGAAGGGAAATTTCGATCAAGGGCCTTCTAGTT
ACACTGTGTTCTAATGCGTGGATATTATAACATGTACGTATACTTATAAG
TCTATCATTTATGTTCTTGGAGGCGCGGAAAGTGCTCTCGTCCTTGCCGC
TTGCTCGGGAGGCTTCGGCGCCGTTCAAACGTTCTGCGACGCCATTGGCT
TCAACGCAGCGGAGGAGGAAGCCACTGATCTCTGTCAGAAGGTACATGAT
CTTGAGATATAAACAATAAGCCTTTTGATGTGTCCGCCCATGTTGTCCAT
AGGGAATAGTTTTGAAAGTCGGGAGGCCATGTTCGGCTACGTGTAATACT
TCGGTTCCATTTCCAATCTGGGGCCCGGCCGGGCAGCTTGCGGGAATAGA
AAATATGATATAAAACACAACAAAAGACACAAAACGAAAACAAATTTCTC
CCAACCATATATTGTGTATTTTCTTGATAGGCCTTTTTTTNGGGCAGCTT
GCGGGAATAGAAAATATAATATAAAACACAACAAAAGACACAAAACGAAA
ACAAATTTCTCCCAACCATATATTGTGTATTTTCTTGATAGGCATTTTTT
TATTTTTCGTTTTCTCAAACAGCCCGACCGGGCCCCGGATTGGAAATGGG
ACCGAAGCATAACCGGGGCTTTACCTGTGCGACGCCCCCGCTGCGTTTCC
TGTTCACCTTTATCTATCTTTGTACTTTTTAAAAGACATTTCTTGTTTCA
ACTACCATATTAGGTGACGGGAACCGTTGACTCCTTTACGCCGGAGCCGG
TGCTTGTTGTCCCGAAGGCCGTGTTCTCGAGTGGGGAGGAAGTCTCCGCA
CCTGGAAAGATCGTGTCTCCTGGAAACGCCAACCAAACACTGCCTGCCTT
CAGCATTACCTCTGGCAGCGGTCACGTGATCTCCTCGGTGGACATCAACC
CCCGAGATCCCTTACCTGGCCAGAACTACGTCGCGCATGCGCAGTTCGTC
TGTACCGACGAGACCACCGTGGCCACCATGAAGATTGTCGGGACAGATGG
GTACCAAAATGAAGTAAGGCCTGATGGTTTGTTTCAGAGTAGACGGCTGT
ATGTTTACATTTTACATGGTAAGGATACCGTGGCCGACAGGTATAATGAA
CAACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACCTACTTTGGG
TGTGCACACAGCTAGCATCTAGTTAACCTTTGGCCTGATCAAGGGACCGT
CCAGGCAGGGGTGTAAGCCTTACAAACTCTAGTGTGTACACCGCAGCCAA
AGTAGGGGTGTTTGCGCACCCAAAGTAGGGGTGTGCGCACCCGAAGAAGG
GGCGTGCGGACCCAAAGTAGGGGCGTGCACACCCACAGTAGGTGTCGTTC
ATTGTACCTGTCGGCCACGGTATAAGGATGTATGGAAATCAAATACATGT
ACTAGTATTTGCCATAAGTTATGATCATGGGTCTTCATATAACTGACGTT
TTATACCTGTAACTCATTGGCTCTGCCTTCATCAGGTGCAGTGCGCAGGC
GCCATCTCGGAATGTACCCTGCACGTGCCAGGGGCGCAGGAGCTCGTGGT
TGACGTCGTCACCATCTCACTCCGCGCAGGCGCACTGCCCGCTGTCTCCA
GGGAGTACGTCATCGTTTTCTGAGCACATCATCATCAATCAACCACCACA
AACACTGACAACAGTCGCGTGGCTGGTTAGCTGTGTTTGTATGACAAGAA
TAAATGTCTGAGTATGCTTTCAGCAATGGAGAATAAAACGGCTTACGTAT
TGTATAAAGAATGATACCATGCTTTCATTATGACAATAAATGTCCTTCAA
ATCAAAACTCACCTGGCTGTCATCCTA Coding sequence (CDS) from alignment at Sc0000020:2968156..2976032+ >Blg03280.2 ID=Blg03280.2|Name=Blg03280.2|organism=Branchiostoma lanceolatum|type=CDS|length=1737bp|location=Sequence derived from alignment at Sc0000020:2968156..2976032+ (Branchiostoma lanceolatum)
ATGGGCGGAAACGTGGCCGCGCTATGTCTGGGTTTTCTTCTGTCGTTCCT
ACCTTGTCCATGGGCTGAAACCTCTCCATGTCCGTCCGGATGGACTGGTC
CTTCCTGCAAGGATTTTTCGTGCGACGGACGGAGCCAGGGCAGTTACCCC
GACCCTAGCGTCTGTCACATGTACTACACCTGTGTTGACGGGTACCAGGC
ACCGTTCCACATGTCCTGTGGGCCTGCCGGTTGGTTGGCCTTCAGTCACG
TGACCCAGAAGTGTGAATGGCCCCAGGATGTGCCCGGATGTGGACCCAGT
CCCTTCGGTATTCTTGGTGTGTCCACCTTTGTGAACCCTGATGACCCCCT
TCTGGTGGAGGTGGCCACTGACGACGGCAACGTCATACAGGTCCAAGGAG
ACAAGACAGAGGAAGGAGCCGCGACCTCTGTGGAGTCCCTAACCCAGACC
TCAGCCGGCGGGGACGAGACCACAGTCGGCTTCTCTCCGGACAGCGCCCT
GGTCGACACCGTGGTGACGTCATCAGGAGTCTCCATGACGTTCGTGTGGA
CTGATGACAAAGTCTACGTCACCGCTTCGGCACAGAACTCTAGTTTCGAG
CTCAATGTGCAGGTTGACCTGGAGCCAAGTACCTTGACACCCGGGTCACC
CATGTCTGAAGTGCACGGAACGGCAGCCCCGATGTCTGCCCCACCAGTCG
ACCACTCGTCCTCCAACAGCGCAGCAGACTCTGCACAAACTGGACTGACG
AGTATCCATGGAGACCAGACTACAGGGGAGACGGACATGCCGCCCTCGGA
GTCGGCTCCCGTCGTGGCGGCGCAGAGTCTCAGGCTGCCCGTCCTGGTCA
CCAGGTGCGGCCTGCCAGCAGACGACGTGACTGTCAAGGCGTTTGGCTAC
AAAATGTCCAGTATCACGCCGCTACTGACCACCGACGTTTCGTCCTTGGA
CCCGGACGTGGAGTACCGAGTTGTCCCGACAGGGGACGCTGGGAAGTTCG
AGATCGTCGTGCCGGCCAGTCCCGCGGATTCCTCCCCGGAGGCGGCGCAG
ACCGTGTGCGACAGCGTCAGTCAGGTGGTCGGGGGCGTGTGCGCCGCGTC
GCTGAACGTCAGGCCTGCAACGGACGGCGCCATCTGTAATGAGGTCGCGG
ACGCCGCGCAGTTTCTCACGACTCAGTCAGGCGCGGAAAGTGCTCTCGTC
CTTGCCGCTTGCTCGGGAGGCTTCGGCGCCGTTCAAACGTTCTGCGACGC
CATTGGCTTCAACGCAGCGGAGGAGGAAGCCACTGATCTCTGTCAGAAGG
TGACGGGAACCGTTGACTCCTTTACGCCGGAGCCGGTGCTTGTTGTCCCG
AAGGCCGTGTTCTCGAGTGGGGAGGAAGTCTCCGCACCTGGAAAGATCGT
GTCTCCTGGAAACGCCAACCAAACACTGCCTGCCTTCAGCATTACCTCTG
GCAGCGGTCACGTGATCTCCTCGGTGGACATCAACCCCCGAGATCCCTTA
CCTGGCCAGAACTACGTCGCGCATGCGCAGTTCGTCTGTACCGACGAGAC
CACCGTGGCCACCATGAAGATTGTCGGGACAGATGGGTACCAAAATGAAG
TGCAGTGCGCAGGCGCCATCTCGGAATGTACCCTGCACGTGCCAGGGGCG
CAGGAGCTCGTGGTTGACGTCGTCACCATCTCACTCCGCGCAGGCGCACT
GCCCGCTGTCTCCAGGGAGTACGTCATCGTTTTCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03280.2-exon-Sc0000020-1570713199:2968156..2968746 | Blg03280.2-exon-Sc0000020-1570713199:2968156..2968746 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2968996..2969051 | Blg03280.2-exon-Sc0000020-1570713199:2968996..2969051 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2970057..2970107 | Blg03280.2-exon-Sc0000020-1570713199:2970057..2970107 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2970554..2970745 | Blg03280.2-exon-Sc0000020-1570713199:2970554..2970745 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2971159..2971241 | Blg03280.2-exon-Sc0000020-1570713199:2971159..2971241 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2971707..2971928 | Blg03280.2-exon-Sc0000020-1570713199:2971707..2971928 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2972724..2973015 | Blg03280.2-exon-Sc0000020-1570713199:2972724..2973015 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2973479..2973754 | Blg03280.2-exon-Sc0000020-1570713199:2973479..2973754 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2974228..2974346 | Blg03280.2-exon-Sc0000020-1570713199:2974228..2974346 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2974869..2975168 | Blg03280.2-exon-Sc0000020-1570713199:2974869..2975168 | Branchiostoma lanceolatum | exon |
| Blg03280.2-exon-Sc0000020-1570713199:2975691..2976032 | Blg03280.2-exon-Sc0000020-1570713199:2975691..2976032 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:2968156..2976032 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03280 |
|
