TCONS_00053506 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053506
Unique NameTCONS_00053506
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2602

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053506 ID=TCONS_00053506|Name=TCONS_00053506|organism=Clytia hemisphaerica|type=transcript|length=2602bp
gataaactaaaaaaaaaataaataaaaaaagttaaaaaacagAAAGATGA
GACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCGT
GACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAAC
ATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTTG
ATGGAAAACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATCGCTC
ATTCAATTCACTCACGCATCAAACACTGTTATACACACCTCAACCAAAGT
CGACGATACCATTCGATACTTGTCACTGCACGATAACAAATATCTGCGCT
ATTTCTCTGGACATACCAAAACTGTTGTCTCCCTTCACATGTCACCTGTA
GATGATAGCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGGA
TCTTCGCTCCAACAACTGTCAGGGTTTGATGCATGTGAGCAGTCGACCGG
TGACATCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGCT
GAAATCATCCGTCTCTATGATCTAAGAACGTTTGATAAGGGTCCATTCGC
TACATTCAATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTATCA
AGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGATTG
GTATATCTGTTAGATGCTTTCCAAGGCAATCTTCTTCATACGTTTATGGG
TCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTC
CAGATTCACAATACGTTTTGTCAGGTTCATCGAACGGCAAGATCTACGTG
TGGTCATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATGCACCC
TGGAAGCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTTCGCTT
CTAGCTGCTCTAACCTTGCATTTTGGATACCAGATTTGAACGAAGTTGAC
AAATAACCTTCAGACCCGGAAAAACAATCGCGCAACGCCGTTGAAAACAA
AATGGTTAACAGGAGAAATGACCATTATTGGACCTTCGAATTGgcgaaaa
tgaaatatttgttcCTATTGAGATAAGTTTACTCATTCTCAGCAACCAAA
CCATGAACTATAAAATCCAAAGAGACTATAATACACAGACATCTACTTGA
AAACGTCAACTTGAACTGATTTGTGTCGTCCGTATATTTTGCACTATAAG
GAAGCAACTCCTTGGTGCTGCAGACATCATTTGTCTGACCACATTGTATA
ACTTGACGTGCAGGTTACTCTCCGGAGTTTACGAAAACCTGTTATTTTGT
CGAAGTTTACCGAAGAATGTAGATATTTACTAGGCCCTTCAATGTTACAA
ATTTTATTGggatttttataaaaggaaaGGTAAGGGTTTGGAAACTTGTg
tataaaatattgattttttggaaatttttttattgaacaaaaaaaaactg
ataCAAAGTAAAAACATAAATTTAGTTTTTCCCTACTTACAAAGCACTTG
AAATCATGCTCTACCGATACAAATTTGACGACAGATCAATCATAAGCTTT
TGTACGTATGAAAGATTTTATGAATTTTGCTTCAACCAGCTTTCTAGTTT
GTTAAGATTATAACCATAAGGTCCTTGTCCTCCATCATACACCACTTTCC
CATTTTGGATCACATACAAGCGATCCGGGAGACCAGCGTATGCCTTGTTA
GCTTCGTTCGTCATGAAATCGATCAAAACTGGACAGTTCTCATTCAATTT
GATTGGACTCATTTCGAATAATTTTTCAGCTGCTTTGATTCTTTCGCTCA
TCTCTGCCTGTTGTTTGATTTGTGGGATATAAGTTGTATATTCATTATCC
TCCATAGGGTGCGCTTCTTGTATGTAGACTGTCACAAAGTCGACTCTCCC
TTTAAAACTCTCACATAGATCAGCAAGACGATCGAGAACAGCTAAGAACG
GGGGTCATGTACAATTTCCAAAATTCAAAACCAAAGGTCGAGATTGACGT
TGAAAATCTAATAATTTCTTCTCCATCTTACTGGCAAGATCGTATATCGG
TATGTTAGGTGCGTCTTTGTAGAGAAATGCTTTTCTGCGAGCATCTAACA
AAGATACTTTTAATCTTTTTGCGATGAAACGATATGTACCAAGGAACTTC
ATTCTCTCATGGATAGCCAACGTGAAAGGTACACTCATTTTCTGATTCTT
TGCTTTTTGTTCTTCAGTAGCGTAAGTGACCATTGGATAACCAGCCAATA
CTTGCATCATTTTCTCCAATTTGGCAGGATTTAGGACGTACAACACTCGC
AATTTGATTGCCGTAAAAATTAGCCATGGTAGTGTGATGAGATATGTTTT
GAGCACACGTAACCATTCTTGTGGGTCGTTGAAAGTCTGCACCATTTTGC
TTTTAAAAGCTGTTAATCTCTTACTCCGTCATTTTTCTTTGCTGCCAAAC
GTGTTGCCTTAATAAGTActtcaaatgtttttctctttAATCACTTTTTT
ACGCAGCACAAAACTTAATTTGCTGCAAATTACGAGTGTAATTATTGCTG
CA
Run BLAST on NCBI

protein sequence of TCONS_00053506-protein

>TCONS_00053506-protein ID=TCONS_00053506-protein|Name=TCONS_00053506-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MRLTDNVIRAFKPAKIFRDNTDRINHIDYTSNGETLITSSDDDSVTLYDC
FDGKQKKTSNSKKYGVSLIQFTHASNTVIHTSTKVDDTIRYLSLHDNKYL
RYFSGHTKTVVSLHMSPVDDSFISGSLDRTIRLWDLRSNNCQGLMHVSSR
PVTSFDPEGLIFAAGVDAEIIRLYDLRTFDKGPFATFNLPQADNGVELSG
IKFSNDGKKILVSTTSGLVYLLDAFQGNLLHTFMGLSTPGSGAVFLEVSF
SPDSQYVLSGSSNGKIYVWSSDSGKRITVLDGMHPGSTQCVAFNPKYMMF
ASSCSNLAFWIPDLNEVDK
Run BLAST on NCBI

transcript from alignment at scaffold_232:44293..53607-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053506 ID=TCONS_00053506|Name=TCONS_00053506|organism=Clytia hemisphaerica|type=transcript|length=9315bp|location=Sequence derived from alignment at scaffold_232:44293..53607- (Clytia hemisphaerica)
GATAAACTAAAAAAAAAATAAATAAAAAAAGTTAAAAAACAGAAAGATGA
GACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCGT
GACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAAC
ATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTTG
ATGGAAAGTAAGATTTTAACATCGTCAACTATCATTATTGACATGCTGAT
GAAGTCACGTAAAAATGATGAAAATTTCAAGTTAAAAGTGGTTGCTTCAT
TTTTCTGTCTTATCAATTTGCTGCTTCTACACTTCAAAATTTTCTATCAT
TATGAGAAGATCTTACTACACGCTTTTTTTTTATAAGAATACACTTTATA
AGAATGTCCATGATGAAAATGGCCAAAAAATTTAGAATATTGTAAGAATA
TCACCATCATGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTAAGGC
ATTTTAACCTGTAGATTGCTAATTTCGATCTTAACCTAAGAATGTTGTAA
GAATATCTTTGGATGATTTTCGCCAAAAAGTTAAGAATATCCATCATGAA
ATGAAAAAGCACCATTCTTATAAAAAAAAGCGTGTAGTAGAAGAAGTAAA
ATTATTTTTTTCTTTTTTTAAACAAACGTTCTTATTGGCGGTCATACTGT
TCTTAAAAGAACTGAATCAAAACGGAATTTTGATAGGATCGTATCGCTTT
GTCATGGGATTGACCGTATTTTAGAGTGATTTCTGCTACAATTATCCCTG
GCCTAAAATCTCAGGTTGGCAGCAATATTATGTATATAGAATTTATTCTT
TCAAATAAATGTGTTTCTCTCCTTTTTTAGACAGAAGAAGACATCAAATA
GCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACACT
GTTATACACACCTCAACCAAAGTCGACGGTAATACATCTCGTTAATTTCT
TAGGTTTTATTATATTAATAAAATCTGTTTTTAAAAAGCAATTTGGACGA
TATACCATCTATGTTTATAACACTTCCTAAATAAAACACGGATAGATTCG
TATTCGTATCGTACTTCGAGTACGAAAAAATTAAGAAATGGGATTAAGAT
TTACAGATTTAGTTGTCATTTTTTCACTTTCATCTATTTAGATACCATTC
GATACTTGTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGACAT
ACCAAAACGTAAGTATTGGCATACAAATCTCCATAAAATTTGATTGCATT
GAGTCTTGTCTAACATGAGATTTACGAATTAATTGATGTTGTTTCTTGAC
CTTCTCCTTAGCCTTTGTTGACTGCTCTGTCAAGCGAAATAAATATTTCT
CAATATTTGTTTCAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGATA
GCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCGC
TCCAACAACTGTCAGGTAACTACTTTCGAAAAAAATAAGTAACCATATTT
TACTTTTGTTGCTAAAGATTTATCTTCGATCAAGTTTATCGCTCATTCCA
TTCGAATAAGTTGAGATTCCAAATTAATACAATTTTGTAGTTCAATCGTT
CTTTTATTTCTTCGAAAATCTCTGATCAACGTGTGTGTCCATGCAAAAAA
ATTTCAAAGAAAATCGTCTAAAAATTATCGACCTTTAGTCATCATAATAA
AAGACAGACAATAATTTCGTTTGTATTTGTGTTTTGTTATTCAGGGTTTG
ATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCTCAT
CTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAAGAA
CGTTTGATAAGGTTGGTATTTCCCTCAATCTTACAAGTGTGAATAGTTTG
ATAAAAATATTTCGTTTAATCATTCTTTGCCACGGCATGACATCACAATT
GGGGAAAACAGAACACTTACTAAAGATAATTATGTGTAATCATCAAACAA
AATCTTTTAGTGAGTTAAACCATAGTGTTTGTTTTCCCCTCGCAATACCT
TAACCCTATTCGGCCTAGGGGGGGGGGGCTCTTTCTGTTTGGAGGTCAAA
CTATTGGTAATAGCTCCTGAAATAATAGAGCTTTTGCGTTGAAATTTTCT
GTAAATTCCCAACTTTCATTTTGATTCAAATTTAAAAAAAAATTGACACT
TAGATATTTTCACACCTTGAGCATGATGACATTTGTGACAGTAAGGTGTC
ACAAAAGTTGACACTTTTGCAATACAAATTTATTTTTAATGTCAAATATA
TCGTTTAAACCGTAATTTATTGAATATTCAGGATAAAATAAGCATTTTAA
ACTCAGGCAACTTTTCTCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTC
AAAAGTTACCTTACGTGACAAGGATCTTGTGTGCCAAATTTCATCCAAAA
AGACCCATTAGATCAAAAGTTAAGGGGTGGTACAGGAAAAGGCCCCTCCC
TATTTCTGAACCGCCCCTAAAAGCCTATGTTGAATAGGGTTAAAGGAAGA
AATTTTGGCGGAAAGAAAATTTGGCGGATTTGGCGGATTTAGCCAAAATC
CGCCAAATTAAGTTCCCGCCAAAATTTATTATTTCCTTCATCCGCCAAAT
TAAATTCCCGCCAAATTTATTTTATTTAACGCATTCCCCAAGTTGGTGCT
ATTTCAGGCCTTAAAACAGGTTTTTTTACTTATTTGATATAGATTTTGGC
CAAAAATATCCTGCAACCGCCAAATTTAATTCCCGCCAAATTTAATTTTT
CCAGCAAAGTAAATTTCCTCTGAAAAAATGTTTTCGACCATCCGCCAAAT
TAAATTTCCGCCAAAATTTCTTCCTTTAAGGTAATTAAATCTTATTGGTT
GAAAAAGATGTCACATGACTTTCCGTGGCAAAGAATCATCGTCATCATTG
AGAACGTTTTGGACCCTTTTTGGTTCTTGGATAGAACCTATATTCTCTGA
TTGGCACTCCTTTCTGATGCCCAAAGTTTCAAGCTTTCAAAGAAAAAGCT
CTATTCACCACCAAAATCCCCATAGTTCAAAACCACTCCCTATCTCGACT
AGTCCATAATCACGTTACGAAGGTTATGACTTATTAAATGTCTACCCTAC
TTTTGATTAATGAAGTAAATATGAAAATCTTTCTTCATTCCGAAATTTAA
AGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAA
CTTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAAC
AACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGCAATCTTCTTC
ATACGTTTATGGTAAGATAGTTTTGTGTATTTTTGGTGTCGCTTGCTTAC
AAGTTTCATTTACCTAGAATCTAAGTATGTGGTATGTGGAATTTTCCGGT
TAATTTTTAAGTTAAATCCTCACATGTGTGCTTAGTGAATAACCTGGGAT
CTTATCTGAATTTTAATAAAAAGGACCTGGACTTTTCGGGTTATATGTGA
GTTTATACACTGTTGTTGAACTTTTTTTCAAATTTGAAAATTGTATTTGT
TTGTGTTGTTGTGCGNCCTTAAAACAGGTTTTTTTACTTATTTGATATAG
ATTTTGGCCAAAAATATCCTGCAACCGCCAAATTTAATTCCCGCCAAATT
TAATTTTTCCAGCAAAGTAAATTTCCTCTGAAAAAATGTTTTCGACCATC
CGCCAAATTAAATTTCCGCCAAAATTTCTTCCTTTAAGGTAATTAAATCT
TATTGGTTGAAAAAGATGTCACATGACTTTCCGTGGCAAAGAATCATCGT
CATCATTGAGAACGTTTTGGACCCTTTTTGGTTCTTGGATAGAACCTATA
TTCTCTGATTGGCACTCCTTTCTGATGCCCAAAGTTTCAAGCTTTCAAAG
AAAAAGCTCTATTCACCACCAAAATCCCCATAGTTCAAAACCACTCCCTA
TCTCGACTAGTCCATAATCACGTTACGAAGGTTATGACTTATTAAATGTC
TACCCTACTTTTGATTAATGAAGTAAATATGAAAATCTTTCTTCATTCCG
AAATTTAAAGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAATG
GTGTTGAACTTTCTAGTATCAAGTTCAGTAACGACGGTAAAAAGATATTG
GTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGCAA
TCTTCTTCATACGTTTATGGTAAGATAGTTTTGTGTATTTTTGGTGTCGC
TTGCTTACAAGTTTCATTTACCTAGAATCTAAGTATGTGGTATGTGGAAT
TTTCCGGTTAATTTTTAAGTTAAATCCTCACATGTGTGCTTAGTGAATAA
CCTGGGATCTTATCTGAATTTTAATAAAAAGGACCTGGACTTTTCGGGTT
ATATGTGAGTTTATACACTGTTGTTGAACTTTTTTTCAAATTTGAAAATT
GTATTTGTTTGTGTTGTTGTGCGACATTGTATTTTGCGTACTTTTAGGGT
CTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTCC
AGATTCACAATACGTTTTGTCAGGTTAGAAAAACTTCGTGTATACATAGC
TCTTCTCTGTGCTGATTACTATAATCCATACAAACTTGAATTAAATATTG
CCACCACCTTGTAAATCTTCAAAATAATGCTTGTACATATTTTTACAACG
AATTAATAGTCTTTTCCAAGAAACCAAGGAATGAGCAGTTAATCTATACC
CCCCCCCCCCAAAAAAAAGCTGAATTAAAAGTGATTGGGCTCCAGGTTAC
CTGCTTCTAATGGCGTTTGATGTCTTCTAAAGACATTTTACGCCTTTCCA
CACTGGTGAACTCAAACCTGATTAAATTTATTTTGTTTTTGCTCCCATCA
TCTCTAGGTTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGCGG
TAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATGTG
TTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACCTT
GTAAGTGTACCTTTCGACATAATTTGCTTTAGGACTATTTTCTAACCCAA
CAAATCAATGATGAAATAAGAAAATTAGATTTGAATTTTGGTGTTTTTCA
AGAAGGGGATGGGAAATTTTCGAGAATGTCTCTATTATCTGTCACTATCA
GTATGTTGGGCAAATTCGGGGGAATAAAGAAATTGAGGCAAGAGATATGA
TACTTTCTCTTTTTCACTCTTCAAAACAAAAGACATACAATCTAAAGTCC
TACTGCATAGAACAAATATTTATCATGTCCAATTGACATTTATATTGTAA
AAATGTTTACAACCAGACTTTCATACGTTCATAGTCAGTATATTTTTTTG
ATTAAAGTAAAACCAAAGAGCGTTAAATATTTCTAATGTAAACCAAAAAC
AGAAATTCAATGTGTAATATTTCGTTAAGAAAACTAAGCATTTTCATTCA
GCCATTTTTCAAGTTTATTCAAGTCATACCCGACTGGGCCTATGCCTCCA
TCATACACCACTTTCCCATTCTGGATCCCATACAAACGATCTGGGAGAGC
AGCGTATGCCTTGTTAGCTTCGTTCGTCATGAAGTCAACCAGCATTGGAC
AGTACTCTTTCAGTTTGGTTGGAGCAGATTCGATCATCATTTCAGCTGCT
TGGATTCTTTCCTCCAACTTTGTTTGTTGTTTGATTTGTGGTATGTGAGG
AAGATCTTCGTTCAAATCGACCGGGTGTGCTTCTGTGATATAAATCATGA
CAAAGTCAGCTCTATCTTTGAAGTGTTCACTAAGTCCGGCCAGGCGTTTA
AGAACACCAACTAGCGGGAATCAGGTGATATTTCCAAAAGTCAATACTAA
AGGCCGGCATTGGCGTTGGAAATCTAGTATTTTCTTCTCTGTTTCGTCCT
GTAGATCATACACTTTGACGTTGGGTGCCTCTTTGTTGATGAATGCTTCT
CTACGAGCGTCCGCTAACGCGATTCTGAAGCGTTTTAAAGTTTGTTGTGG
TCTGCCAAGAAAGTGATGTGTTTTGTTTTTGTCAAAGATGTAAACTATTT
TATGGTAGAGTGTTGTCAAAATCAACATTGGTAGGGTGATGAGATATGTT
TTGAGTGTGCGGACCCATTGTTGTGGGTCGTCATAACTCTGTATGTAGTT
TATAGTCCAACTTGTTTCTAAGTTGAATAACATTTTAACCCTCGCACGAA
CCACTAAACCATTTCTTTTGCCCTCCTTGTCAACTTCTTCCTCGCTGAGT
AAAAAGCAAAGGCTGAATAAAATAAACGATAATTTTCAACGAAATGAAAA
ATGCAGAGTAATGCCTCTTGATTGAAAAGAAATTATATTACATAAATCAA
AGTATTGATTGACATTTGGTAATTACCATTTACATTCGGTTATTTTTAGT
GATGTATAGATAGCTTAACTTCACAGTGCCACTGTTGTAGAATCTTATAT
TGTGATACTGTGTGTTAGTTTTTAGTAAAGCTTAGATTACTTTTTGGACA
TACCCCGGGGGAGGTCCTATGAATTAACCCATGTTCGGTCGTGCGTTCGT
GTGTTAGTTACAAACTTTTCTTAAGATTGGCTCATTCAAATTTTCTGATG
TTTGGCACAAAGGTACATGACTCCCTCGAAAGTGACAGAGCCCGATTTTA
GAAGAAAAAAAAATTGGGCAAATTTGGGCCGAAAAACGGCTAAAAACGGT
TTTTTGGACTTTGTGAAAAATTGGATCATTAGTTTTTTCTGATTTTTTTG
CATGAAAGTAGGGTACCATCATAGGTAAAACATGGCTTAAGCAGATTTTT
GCAAAAAAATTTTCGGCTCAAAAAACGCATGTTTATCTATAAGAATCACT
ATTAATAAGCATACATCAATGTTCTTAGCCGAATTAGTCAATTTTTTGAT
GAGATAGATGTTTTTCTGCTCATAAAGATTTACTTTTGAAGAATATGTGT
GTTTAGACATGAAATTTTGGTTGCTAGACGTGTTTTTATAGAAAATGTGA
CCAAATTCGATATTTTGTTACAAGCCTATTACCAATTACTTAGTTATTAG
CTTTTCTCGAGATTGGCTCTTTCATTCTTTATGATTTTTTGCACAAAGAT
GCATAACTATAAACCCTCGAATGTGACGGAGCTCGATTTTCGATTTTCTA
AACGTGTTTTTTATAAGAAATAAACGACGAATTTTAATATATCGTCACTA
TTTGTGTTCTGAATGATTGTTTAATGGTCACACTCACGTAGATATCAATT
ATAAATGTGTTAAATGCATAACCAGGTAGGTCCATTAAAGTATCGCTTGT
TTGTCATTTATTTGCTCTTTTTATCTACAGGCATTTTGGATACCAGATTT
GAACGAAGTTGACAAATAACCTTCAGACCCGGAAAAACAATCGCGCAACG
CCGTTGAAAACAAAATGGTTAACAGGAGAAATGACCATTATTGGACCTTC
GAATTGGCGAAAATGAAATATTTGTTCCTATTGAGATAAGTTTACTCATT
CTCAGCAACCAAACCATGAACTATAAAATCCAAAGAGACTATAATACACA
GACATCTACTTGAAAACGTCAACTTGAACTGATTTGTGTCGTCCGTATAT
TTTGCACTATAAGGAAGCAACTCCTTGGTGCTGCAGACATCATTTGTCTG
ACCACATTGTATAACTTGACGTGCAGGTTACTCTCCGGAGTTTACGAAAA
CCTGTTATTTTGTCGAAGTTTACCGAAGAATGTAGATATTTACTAGGCCC
TTCAATGTTACAAATTTTATTGGGATTTTTATAAAAGGAAAGGTAAGGGT
TTGGAAACTTGTGTATAAAATATTGATTTTTTGGAAATTTTTTTATTGAA
CAAAAAAAAACTGATACAAAGTAAAAACATAAATTTAGTTTTTCCCTACT
TACAAAGCACTTGAAATCATGCTCTACCGATACAAATTTGACGACAGATC
AATCATAAGCTTTTGTACGTATGAAAGATTTTATGAATTTTGCTTCAACC
AGCTTTCTAGTTTGTTAAGATTATAACCATAAGGTCCTTGTCCTCCATCA
TACACCACTTTCCCATTTTGGATCACATACAAGCGATCCGGGAGACCAGC
GTATGCCTTGTTAGCTTCGTTCGTCATGAAATCGATCAAAACTGGACAGT
TCTCATTCAATTTGATTGGACTCATTTCGAATAATTTTTCAGCTGCTTTG
ATTCTTTCGCTCATCTCTGCCTGTTGTTTGATTTGTGGGATATAAGTTGT
ATATTCATTATCCTCCATAGGGTGCGCTTCTTGTATGTAGACTGTCACAA
AGTCGACTCTCCCTTTAAAACTCTCACATAGATCAGCAAGACGATCGAGA
ACAGCTAAGAACGGGGGTCATGTACAATTTCCAAAATTCAAAACCAAAGG
TCGAGATTGACGTTGAAAATCTAATAATTTCTTCTCCATCTTACTGGCAA
GATCGTATATCGGTATGTTAGGTGCGTCTTTGTAGAGAAATGCTTTTCTG
CGAGCATCTAACAAAGATACTTTTAATCTTTTTGCGATGAAACGATATGT
ACCAAGGAACTTCATTCTCTCATGGATAGCCAACGTGAAAGGTACACTCA
TTTTCTGATTCTTTGCTTTTTGTTCTTCAGTAGCGTAAGTGACCATTGGA
TAACCAGCCAATACTTGCATCATTTTCTCCAATTTGGCAGGATTTAGGAC
GTACAACACTCGCAATTTGATTGCCGTAAAAATTAGCCATGGTAGTGTGA
TGAGATATGTTTTGAGCACACGTAACCATTCTTGTGGGTCGTTGAAAGTC
TGCACCATTTTGCTTTTAAAAGCTGTTAATCTCTTACTCCGTCATTTTTC
TTTGCTGCCAAACGTGTTGCCTTAATAAGTACTTCAAATGTTTTTCTCTT
TAATCACTTTTTTACGCAGCACAAAACTTAATTTGCTGCAAATTACGAGT
GTAATTATTGCTGCA

Coding sequence (CDS) from alignment at scaffold_232:44293..53607-

>TCONS_00053506 ID=TCONS_00053506|Name=TCONS_00053506|organism=Clytia hemisphaerica|type=CDS|length=9600bp|location=Sequence derived from alignment at scaffold_232:44293..53607- (Clytia hemisphaerica)
GCATTTTGGATACCAGATTTGAACGAAGTTGACAAATAAGTTCATCGAAC
GGCAAGATCTACGTGTGGTCATCGGACAGCGGTAAACGGATAACCGTGCT
GGATGGTATGCACCCTGGAAGCACGCAATGTGTTGCTTTCAACCCCAAAT
ACATGATGTTCGCTTCTAGCTGCTCTAACCTTGGTCTCTCTACACCAGGA
AGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTCCAGATTCACAATACGT
TTTGTCAGGCAATCTTCTTCATACGTTTATGGGTCCATTCGCTACATTCA
ATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTATCAAGTTCAGT
AACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGATTGGTATATCT
GTTAGATGCTTTCCAAGGGTTTGATGCATGTGAGCAGTCGACCGGTGACA
TCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGCTGAAAT
CATCCGTCTCTATGATCTAAGAACGTTTGATAAGTGTTGTCTCCCTTCAC
ATGTCACCTGTAGATGATAGCTTCATATCCGGTTCACTGGATCGTACCAT
CAGATTGTGGGATCTTCGCTCCAACAACTGTCAGATACCATTCGATACTT
GTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGACATACCAAAA
CACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATCGCTCATTCAA
TTCACTCACGCATCAAACACTGTTATACACACCTCAACCAAAGTCGACGA
TGAGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTT
CGTGACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGA
AACATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTT
TTGATGGAAAGCATTTTGGATACCAGATTTGAACGAAGTTGACAAATAAG
TTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGCGGTAAACGGA
TAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATGTGTTGCTTTC
AACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACCTTGGTCTCTC
TACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTCCAGATT
CACAATACGTTTTGTCAGGCAATCTTCTTCATACGTTTATGGGTCCATTC
GCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTAT
CAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGAT
TGGTATATCTGTTAGATGCTTTCCAAGGGTTTGATGCATGTGAGCAGTCG
ACCGGTGACATCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTG
ATGCTGAAATCATCCGTCTCTATGATCTAAGAACGTTTGATAAGTGTTGT
CTCCCTTCACATGTCACCTGTAGATGATAGCTTCATATCCGGTTCACTGG
ATCGTACCATCAGATTGTGGGATCTTCGCTCCAACAACTGTCAGATACCA
TTCGATACTTGTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGA
CATACCAAAACACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATC
GCTCATTCAATTCACTCACGCATCAAACACTGTTATACACACCTCAACCA
AAGTCGACGATGAGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGC
CAAGATTTTTCGTGACAACACAGACAGGATAAACCACATCGACTACACTT
CCAACGGTGAAACATTGATCACGAGTAGCGATGATGACTCCGTCACCCTT
TACGATTGTTTTGATGGAAAGCATTTTGGATACCAGATTTGAACGAAGTT
GACAAATAAGTTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGC
GGTAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATG
TGTTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACC
TTGGTCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTT
TCTCCAGATTCACAATACGTTTTGTCAGGCAATCTTCTTCATACGTTTAT
GGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAAC
TTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACA
ACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGGTTTGATGCATG
TGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCTCATCTTTGCC
GCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAAGAACGTTTGA
TAAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGATAGCTTCATATCC
GGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCGCTCCAACAACTG
TCAGATACCATTCGATACTTGTCACTGCACGATAACAAATATCTGCGCTA
TTTCTCTGGACATACCAAAACACAGAAGAAGACATCAAATAGCAAGAAAT
ATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACACTGTTATACAC
ACCTCAACCAAAGTCGACGATGAGACTCACAGACAACGTTATCCGTGCTT
TCAAACCAGCCAAGATTTTTCGTGACAACACAGACAGGATAAACCACATC
GACTACACTTCCAACGGTGAAACATTGATCACGAGTAGCGATGATGACTC
CGTCACCCTTTACGATTGTTTTGATGGAAAGCATTTTGGATACCAGATTT
GAACGAAGTTGACAAATAAGTTCATCGAACGGCAAGATCTACGTGTGGTC
ATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAA
GCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGC
TGCTCTAACCTTGGTCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGA
AGTATCCTTTTCTCCAGATTCACAATACGTTTTGTCAGGCAATCTTCTTC
ATACGTTTATGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAAT
GGTGTTGAACTTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATT
GGTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGGT
TTGATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCT
CATCTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAA
GAACGTTTGATAAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGATAG
CTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCGCT
CCAACAACTGTCAGATACCATTCGATACTTGTCACTGCACGATAACAAAT
ATCTGCGCTATTTCTCTGGACATACCAAAACACAGAAGAAGACATCAAAT
AGCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACAC
TGTTATACACACCTCAACCAAAGTCGACGATGAGACTCACAGACAACGTT
ATCCGTGCTTTCAAACCAGCCAAGATTTTTCGTGACAACACAGACAGGAT
AAACCACATCGACTACACTTCCAACGGTGAAACATTGATCACGAGTAGCG
ATGATGACTCCGTCACCCTTTACGATTGTTTTGATGGAAAGCATTTTGGA
TACCAGATTTGAACGAAGTTGACAAATAAGTTCATCGAACGGCAAGATCT
ACGTGTGGTCATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATG
CACCCTGGAAGCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTT
CGCTTCTAGCTGCTCTAACCTTGGTCTCTCTACACCAGGAAGCGGTGCTG
TTTTCTTGGAAGTATCCTTTTCTCCAGATTCACAATACGTTTTGTCAGGC
AATCTTCTTCATACGTTTATGGGTCCATTCGCTACATTCAATCTACCGCA
AGCAGACAATGGTGTTGAACTTTCTGGTATCAAGTTCAGTAACGACGGTA
AAAAGATATTGGTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCT
TTCCAAGGGTTTGATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATC
CTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTC
TATGATCTAAGAACGTTTGATAAGTGTTGTCTCCCTTCACATGTCACCTG
TAGATGATAGCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGG
GATCTTCGCTCCAACAACTGTCAGATACCATTCGATACTTGTCACTGCAC
GATAACAAATATCTGCGCTATTTCTCTGGACATACCAAAACACAGAAGAA
GACATCAAATAGCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACG
CATCAAACACTGTTATACACACCTCAACCAAAGTCGACGATGAGACTCAC
AGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCGTGACAACA
CAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAACATTGATC
ACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTTGATGGAAA
GCATTTTGGATACCAGATTTGAACGAAGTTGACAAATAAGTTCATCGAAC
GGCAAGATCTACGTGTGGTCATCGGACAGCGGTAAACGGATAACCGTGCT
GGATGGTATGCACCCTGGAAGCACGCAATGTGTTGCTTTCAACCCCAAAT
ACATGATGTTCGCTTCTAGCTGCTCTAACCTTGGTCTCTCTACACCAGGA
AGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTCCAGATTCACAATACGT
TTTGTCAGGCAATCTTCTTCATACGTTTATGGGTCCATTCGCTACATTCA
ATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTATCAAGTTCAGT
AACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGATTGGTATATCT
GTTAGATGCTTTCCAAGGGTTTGATGCATGTGAGCAGTCGACCGGTGACA
TCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGCTGAAAT
CATCCGTCTCTATGATCTAAGAACGTTTGATAAGTGTTGTCTCCCTTCAC
ATGTCACCTGTAGATGATAGCTTCATATCCGGTTCACTGGATCGTACCAT
CAGATTGTGGGATCTTCGCTCCAACAACTGTCAGATACCATTCGATACTT
GTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGACATACCAAAA
CACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATCGCTCATTCAA
TTCACTCACGCATCAAACACTGTTATACACACCTCAACCAAAGTCGACGA
TGAGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTT
CGTGACAACACAGACAGGATAAACCACATCGACTACACTTCCAACGGTGA
AACATTGATCACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTT
TTGATGGAAAGCATTTTGGATACCAGATTTGAACGAAGTTGACAAATAAG
TTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGCGGTAAACGGA
TAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATGTGTTGCTTTC
AACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACCTTGGTCTCTC
TACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTTTCTCCAGATT
CACAATACGTTTTGTCAGGCAATCTTCTTCATACGTTTATGGGTCCATTC
GCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAACTTTCTGGTAT
CAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACAACATCAGGAT
TGGTATATCTGTTAGATGCTTTCCAAGGGTTTGATGCATGTGAGCAGTCG
ACCGGTGACATCTTTTGATCCTGAAGGTCTCATCTTTGCCGCTGGTGTTG
ATGCTGAAATCATCCGTCTCTATGATCTAAGAACGTTTGATAAGTGTTGT
CTCCCTTCACATGTCACCTGTAGATGATAGCTTCATATCCGGTTCACTGG
ATCGTACCATCAGATTGTGGGATCTTCGCTCCAACAACTGTCAGATACCA
TTCGATACTTGTCACTGCACGATAACAAATATCTGCGCTATTTCTCTGGA
CATACCAAAACACAGAAGAAGACATCAAATAGCAAGAAATATGGAGTATC
GCTCATTCAATTCACTCACGCATCAAACACTGTTATACACACCTCAACCA
AAGTCGACGATGAGACTCACAGACAACGTTATCCGTGCTTTCAAACCAGC
CAAGATTTTTCGTGACAACACAGACAGGATAAACCACATCGACTACACTT
CCAACGGTGAAACATTGATCACGAGTAGCGATGATGACTCCGTCACCCTT
TACGATTGTTTTGATGGAAAGCATTTTGGATACCAGATTTGAACGAAGTT
GACAAATAAGTTCATCGAACGGCAAGATCTACGTGTGGTCATCGGACAGC
GGTAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAAGCACGCAATG
TGTTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGCTGCTCTAACC
TTGGTCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGAAGTATCCTTT
TCTCCAGATTCACAATACGTTTTGTCAGGCAATCTTCTTCATACGTTTAT
GGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAATGGTGTTGAAC
TTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATTGGTCTCAACA
ACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGGTTTGATGCATG
TGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCTCATCTTTGCC
GCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAAGAACGTTTGA
TAAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGATAGCTTCATATCC
GGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCGCTCCAACAACTG
TCAGATACCATTCGATACTTGTCACTGCACGATAACAAATATCTGCGCTA
TTTCTCTGGACATACCAAAACACAGAAGAAGACATCAAATAGCAAGAAAT
ATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACACTGTTATACAC
ACCTCAACCAAAGTCGACGATGAGACTCACAGACAACGTTATCCGTGCTT
TCAAACCAGCCAAGATTTTTCGTGACAACACAGACAGGATAAACCACATC
GACTACACTTCCAACGGTGAAACATTGATCACGAGTAGCGATGATGACTC
CGTCACCCTTTACGATTGTTTTGATGGAAAGCATTTTGGATACCAGATTT
GAACGAAGTTGACAAATAAGTTCATCGAACGGCAAGATCTACGTGTGGTC
ATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATGCACCCTGGAA
GCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTTCGCTTCTAGC
TGCTCTAACCTTGGTCTCTCTACACCAGGAAGCGGTGCTGTTTTCTTGGA
AGTATCCTTTTCTCCAGATTCACAATACGTTTTGTCAGGCAATCTTCTTC
ATACGTTTATGGGTCCATTCGCTACATTCAATCTACCGCAAGCAGACAAT
GGTGTTGAACTTTCTGGTATCAAGTTCAGTAACGACGGTAAAAAGATATT
GGTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCTTTCCAAGGGT
TTGATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATCCTGAAGGTCT
CATCTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTCTATGATCTAA
GAACGTTTGATAAGTGTTGTCTCCCTTCACATGTCACCTGTAGATGATAG
CTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGGGATCTTCGCT
CCAACAACTGTCAGATACCATTCGATACTTGTCACTGCACGATAACAAAT
ATCTGCGCTATTTCTCTGGACATACCAAAACACAGAAGAAGACATCAAAT
AGCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACGCATCAAACAC
TGTTATACACACCTCAACCAAAGTCGACGATGAGACTCACAGACAACGTT
ATCCGTGCTTTCAAACCAGCCAAGATTTTTCGTGACAACACAGACAGGAT
AAACCACATCGACTACACTTCCAACGGTGAAACATTGATCACGAGTAGCG
ATGATGACTCCGTCACCCTTTACGATTGTTTTGATGGAAAGCATTTTGGA
TACCAGATTTGAACGAAGTTGACAAATAAGTTCATCGAACGGCAAGATCT
ACGTGTGGTCATCGGACAGCGGTAAACGGATAACCGTGCTGGATGGTATG
CACCCTGGAAGCACGCAATGTGTTGCTTTCAACCCCAAATACATGATGTT
CGCTTCTAGCTGCTCTAACCTTGGTCTCTCTACACCAGGAAGCGGTGCTG
TTTTCTTGGAAGTATCCTTTTCTCCAGATTCACAATACGTTTTGTCAGGC
AATCTTCTTCATACGTTTATGGGTCCATTCGCTACATTCAATCTACCGCA
AGCAGACAATGGTGTTGAACTTTCTGGTATCAAGTTCAGTAACGACGGTA
AAAAGATATTGGTCTCAACAACATCAGGATTGGTATATCTGTTAGATGCT
TTCCAAGGGTTTGATGCATGTGAGCAGTCGACCGGTGACATCTTTTGATC
CTGAAGGTCTCATCTTTGCCGCTGGTGTTGATGCTGAAATCATCCGTCTC
TATGATCTAAGAACGTTTGATAAGTGTTGTCTCCCTTCACATGTCACCTG
TAGATGATAGCTTCATATCCGGTTCACTGGATCGTACCATCAGATTGTGG
GATCTTCGCTCCAACAACTGTCAGATACCATTCGATACTTGTCACTGCAC
GATAACAAATATCTGCGCTATTTCTCTGGACATACCAAAACACAGAAGAA
GACATCAAATAGCAAGAAATATGGAGTATCGCTCATTCAATTCACTCACG
CATCAAACACTGTTATACACACCTCAACCAAAGTCGACGATGAGACTCAC
AGACAACGTTATCCGTGCTTTCAAACCAGCCAAGATTTTTCGTGACAACA
CAGACAGGATAAACCACATCGACTACACTTCCAACGGTGAAACATTGATC
ACGAGTAGCGATGATGACTCCGTCACCCTTTACGATTGTTTTGATGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033778XLOC_033778Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053506-proteinTCONS_00053506-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053506-exon-scaffold_232-1575043694:53401..53607TCONS_00053506-exon-scaffold_232-1575043694:53401..53607Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:52630..52727TCONS_00053506-exon-scaffold_232-1575043694:52630..52727Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:52350..52416TCONS_00053506-exon-scaffold_232-1575043694:52350..52416Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:52093..52192TCONS_00053506-exon-scaffold_232-1575043694:52093..52192Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:51697..51813TCONS_00053506-exon-scaffold_232-1575043694:51697..51813Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:50020..50155TCONS_00053506-exon-scaffold_232-1575043694:50020..50155Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:49089..49111TCONS_00053506-exon-scaffold_232-1575043694:49089..49111Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:48735..48810TCONS_00053506-exon-scaffold_232-1575043694:48735..48810Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:48258..48400TCONS_00053506-exon-scaffold_232-1575043694:48258..48400Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1575043694:44293..45927TCONS_00053506-exon-scaffold_232-1575043694:44293..45927Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:53401..53607TCONS_00053506-exon-scaffold_232-1510915933:53401..53607Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:52630..52727TCONS_00053506-exon-scaffold_232-1510915933:52630..52727Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:52350..52416TCONS_00053506-exon-scaffold_232-1510915933:52350..52416Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:52093..52192TCONS_00053506-exon-scaffold_232-1510915933:52093..52192Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:51697..51813TCONS_00053506-exon-scaffold_232-1510915933:51697..51813Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:50020..50155TCONS_00053506-exon-scaffold_232-1510915933:50020..50155Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:49089..49111TCONS_00053506-exon-scaffold_232-1510915933:49089..49111Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:48735..48810TCONS_00053506-exon-scaffold_232-1510915933:48735..48810Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:48258..48400TCONS_00053506-exon-scaffold_232-1510915933:48258..48400Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1510915933:44293..45927TCONS_00053506-exon-scaffold_232-1510915933:44293..45927Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:53401..53607TCONS_00053506-exon-scaffold_232-1491911889:53401..53607Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:52630..52727TCONS_00053506-exon-scaffold_232-1491911889:52630..52727Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:52350..52416TCONS_00053506-exon-scaffold_232-1491911889:52350..52416Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:52093..52192TCONS_00053506-exon-scaffold_232-1491911889:52093..52192Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:51697..51813TCONS_00053506-exon-scaffold_232-1491911889:51697..51813Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:50020..50155TCONS_00053506-exon-scaffold_232-1491911889:50020..50155Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:49089..49111TCONS_00053506-exon-scaffold_232-1491911889:49089..49111Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:48735..48810TCONS_00053506-exon-scaffold_232-1491911889:48735..48810Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:48258..48400TCONS_00053506-exon-scaffold_232-1491911889:48258..48400Clytia hemisphaericaexon
TCONS_00053506-exon-scaffold_232-1491911889:44293..45927TCONS_00053506-exon-scaffold_232-1491911889:44293..45927Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_232supercontigscaffold_232:44293..53607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.2342	27.3891	61.0829	58.5996	9.28347	8.04778	9.17813	11.1448	10.4487	7.22261	9.52673	11.2442	12.0081	12.3549	17.2351	19.3514	8.67209	16.1087	6.62459	6.07299	14.0462	13.6555	17.0665	14.499	8.27667	7.82661	5.48253	4.54494	8.00703	8.06115
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00053506 vs. Swiss-Prot (Human)
Match: WDR82 (WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 8.643e-146
Identity = 199/316 (62.97%), Postives = 263/316 (83.23%), Query Frame = 2 
Query:   47 MRLTDNVIRAFKPAKIFRDNTDRINHIDYTSNGETLITSSDDDSVTLYDCFDGKQKKTSNSKKYGVSLIQFTHASNTVIHTSTKVDDTIRYLSLHDNKYLRYFSGHTKTVVSLHMSPVDDSFISGSLDRTIRLWDLRSNNCQGLMHVSSRPVTSFDPEGLIFAAGVDAEIIRLYDLRTFDKGPFATFNLPQADNGVELSGIKFSNDGKKILVSTTSGLVYLLDAFQGNLLHTFMGLSTPGSGAVFLEVSFSPDSQYVLSGSSNGKIYVWSSDSGKRITVLDGMHPGSTQCVAFNPKYMMFASSCSNLAFWIPDLNE 994
            M+LTD+V+R+F+ AK+FR+N+D+IN  D++ NGET+I+SSDDDS+ LYDC +GK K+T  SKKYGV LI++THA+NTV+++S K+DDTIRYLSLHDNKY+RYF GH+K VV+L MSPVDD+FISGSLD+TIRLWDLRS NCQGLMH+  +PV SFDPEGLIFAAGV++E+++LYDLR+FDKGPFATF + Q D   E +G+KFSNDGK IL+ST    + L+DAF+G ++HTF G +   S AV LE SF+PDSQ+++ GS +GKI+VW+ +SG ++ VLDG H G   C+ FNPK+M FAS+CSN+AFW+P +++
Sbjct:    1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKM-QYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYAN--SKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 313
The following BLAST results are available for this feature:
BLAST of TCONS_00053506 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR828.643e-14662.97WD repeat-containing protein 82 OS=Homo sapiens GN... [more]
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