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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053001 ID=TCONS_00053001|Name=TCONS_00053001|organism=Clytia hemisphaerica|type=transcript|length=1045bp
GGTTCATTGGTTCATTGGTTCATTGGTGTCACAAGCCCATTATTCCCTAG
AATATGACCGTCGGAATAAATTGGCCCTTGAATGTGTAGCATATTGTTCA
TTAAGCTCGGATTGATCGCGAAAAGAGTTTCCCCGTCGTTCTATCTTTGA
TGAAGTGTCAGGAGCTTTTTCTGAAacgaataaaaaaaatatttaattaa
cAAATCACGGAcgctaaaaataattttagatttcaaaaatcataTCATAC
ACCCCtatttttggtcttttttgtAACAGTAAACGCTAAAAGAGTCAATT
ACGATTAGGCTTCTTTTTTTACTAGCGGCGAAGAATTGTACTGCACCAAA
TTCCATTGACATCATTTGTTCCATTCTCATACGAAATTCCCCCGCAAGGA
CTTCAATGTCGTGACATGATTGTACAAACCACAGACATTTTACTTAGAAC
ACTAAACAGAGCTTCTCCTTCACGagctgaagcaaaataatccatAATCT
TTAACAAgcagggggggtcggtactaaaaatttcagacatcatgactttt
agtgacgtggtggtattataaaaaaagcctaaaagcattttagtaccatg
tgtactaaaatcccaaattaggtggggtcttcaagaaatttaagaaaaat
tttagtacaCGAGTAccaccaaattttaggaaatttaactaTTGACTGAG
CACTTTAGgcaaagtgaaaaaataaaaactctctatataagatttaaata
cgtccctgtgtcacaaattaagcaaaaattttgtccccggtggtaaaata
tccttgaatttcagccccactggaaaattaactttgatttcatccccatg
tcgaaattccatgtttgaaaattgcactccaaaactgcCCAAAACCATAT
CCCCATTtggtttttaaccttggaacaatagaatttctatccccattacc
atttcaataggaaatttCATTTCAACTGANTGAGGAAAAAGGTTCCTCTG
GGGCTGTGAAACACCCATGTTTCAATTTAATTGTTCTGCTTTTAT Run BLAST on NCBI transcript from alignment at scaffold_222:553112..554156 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053001 ID=TCONS_00053001|Name=TCONS_00053001|organism=Clytia hemisphaerica|type=transcript|length=1045bp|location=Sequence derived from alignment at scaffold_222:553112..554156 (Clytia hemisphaerica)
ATAAAAGCAGAACAATTAAATTGAAACATGGGTGTTTCACAGCCCCAGAG
GAACCTTTTTCCTCANTCAGTTGAAATGaaatttcctattgaaatggtaa
tggggatagaaattctattgttccaaggttaaaaaccaAATGGGGATATG
GTTTTGGgcagttttggagtgcaattttcaaacatggaatttcgacatgg
ggatgaaatcaaagttaattttccagtggggctgaaattcaaggatattt
taccaccggggacaaaatttttgcttaatttgtgacacagggacgtattt
aaatcttatatagagagtttttattttttcactttgcCTAAAGTGCTCAG
TCAAtagttaaatttcctaaaatttggtggTACTCGtgtactaaaatttt
tcttaaatttcttgaagaccccacctaatttgggattttagtacacatgg
tactaaaatgcttttaggctttttttataataccaccacgtcactaaaag
tcatgatgtctgaaatttttagtaccgaccccccctgcTTGTTAAAGATT
atggattattttgcttcagctCGTGAAGGAGAAGCTCTGTTTAGTGTTCT
AAGTAAAATGTCTGTGGTTTGTACAATCATGTCACGACATTGAAGTCCTT
GCGGGGGAATTTCGTATGAGAATGGAACAAATGATGTCAATGGAATTTGG
TGCAGTACAATTCTTCGCCGCTAGTAAAAAAAGAAGCCTAATCGTAATTG
ACTCTTTTAGCGTTTACTGTTacaaaaaagaccaaaaataGGGGTGTATG
AtatgatttttgaaatctaaaattatttttagcgTCCGTGATTTgttaat
taaatattttttttattcgtTTCAGAAAAAGCTCCTGACACTTCATCAAA
GATAGAACGACGGGGAAACTCTTTTCGCGATCAATCCGAGCTTAATGAAC
AATATGCTACACATTCAAGGGCCAATTTATTCCGACGGTCATATTCTAGG
GAATAATGGGCTTGTGACACCAATGAACCAATGAACCAATGAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053001-exon-scaffold_222-1491911889:553112..554156 | TCONS_00053001-exon-scaffold_222-1491911889:553112..554156 | Clytia hemisphaerica | exon |
| TCONS_00053001-exon-scaffold_222-1510915933:553112..554156 | TCONS_00053001-exon-scaffold_222-1510915933:553112..554156 | Clytia hemisphaerica | exon |
| TCONS_00053001-exon-scaffold_222-1575043694:553112..554156 | TCONS_00053001-exon-scaffold_222-1575043694:553112..554156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_222 | supercontig | scaffold_222:553112..554156 . |
Blast
The following BLAST results are available for this feature:
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