TCONS_00052817 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052817
Unique NameTCONS_00052817
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4853

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052817 ID=TCONS_00052817|Name=TCONS_00052817|organism=Clytia hemisphaerica|type=transcript|length=4853bp
AAGAAAATTATTCCCCCAAATAACAAGCCCTATTTTGTCGTTAtaattca
agtaaaaaaaattttttgacagtttCTTATAAATAACCGGTAAACGATAT
ACGTAATAGGCGCGTGTTGAATAGATCAATTATATGAGAACAATAGTATC
ATTTCATCTCGTTGCCGGCAATTTGAATTGTATTGTTTTTGCTCACTCGG
AAAGTTTGTGGCAACGCAGTTTATAGAAAGTTTTGATACAGACGGATGAA
TGTTATTATAGCGAAACGGGCAAGAATAAGGccgtaaagaaaaaaaagta
tttttgggtttttgtcTGTTGTTGTTTCAAAGTGCTGTAGTCAAAACTTG
AACAAAGTTTTTTATGAGTGTTACATACATAAAAAACTGACGAAAATGGT
TGAATCAGATTTTACCATGGTTGGAGCGTCTAGACGAAAAACAAGACTTC
CCCGCAAGATTTTGCGAGTGAAACAAGACGATGGACATGTTAAACTCGAG
CCTCAAGAAAATTGCTATAAATCAGATGACCAAATGATGGAATCTGATGA
TATCCcgtctccttcttcttctcctcaATCAAATGACCAATACAATGATA
GTTTTTACGACAAATATGATACAAATCGTTACAACACTGCCTATGTTGGT
GGTGAGTACCTGAAAGAAGCCAcaaagcttttccttaaatctCAAACCAC
TTCAGATTACATTGTTGTACAGCCATCCTATGATGATCAACCTCCAGTCA
TCTCGTCAGAACCTGATGTCAAAATCTCGTCACCACCAAGAGATGATCAT
GATGTCAGAGATACTAGAGAACATGGAGATCGAATCAAAACATACAATCC
TGTCAAGAAACAATATTACCAGAAACATCATATACCAAACTTAACCAAGA
AGCATCATCACCCTGAACCAACACCAGATAATCCTTACCAATGTGAAACT
TGTGATATGCTTTTCAAGAATCTAGAGCTTCTGTCTGACCATCAAAAGAC
AGTTCATGATAACAACAGGCAATTTGCTTGCAGATACTGTGGCAAACGCT
TCAATGATAAATATAATATGCGGAAGCATGTTTTGATTCATGTTGGTGAA
AAGCGTCACAAGTGTCAATTCTGTGAAAAAGCATTTTTAAGAAAAGATCA
CTTGAGGAGTCACTTGCAGACCCATTACAACAGAAAATATGGCTGCAAGC
TCTGTGGCAAGAGCTTCAAAACAATTGAGCTTTACCACAGGCACGTCAAA
ACACATAAAGAATTAGACCACCTGTCTGAAATTAACAATTTAGAAAATCT
CCTGCCAGAATTGGAGAGATATGATAGCCCAAAACTTGACAGATACAGTC
CTAAACTTGACCGATACGACAGCCCTAAACTTGATCGATATGACAGCCCA
ATTCCAAGCAGTAGACCAACTCACCATCACTATACACCTGCACCAGAAAT
CACAAGGGAACTTATTGCACCACCTGTTGTCAAGCATGAACGCATGAATG
AAAGGCTGGATGATTCAAGAGGGGAGGACTCACCATGGAACCGTAGTGGT
AGCCCAACCTACTCAGATATCAGTGGTAGCTCATTTTCACAATCAAGTCC
TAGAGGGATGGACTATGGAAGCGCAAACGAAAATACAGATGTACTGAAGA
GAGTATTGTcaTACAGATGTGGATTTTGCAATGCTACTTTTGAAGACAAA
GAATCTGTGACAATACATGAAAGAAAATGTCGAGCTGAGACCCAAAAATG
GCAATGTGTCAAATGCAACATTGTTTTTGATGAACCTGgtacgttgaaac
aacattatGAGAAAGTCCATTCCACTGAAAAACCTGTTCAAAGTCCATCC
AGGTGGCGTTGTAAAACCTGTGACATCAACTACCCCAATTCAAAAGAGCT
CAGCCGCCATTATGCAAGTGCCCATAAGGATGCACAAATCTTCCCATGTT
CTGAATGCCCGAAAACCTTTACTGTATGGCATAACCTGAAGAAACATATG
CTCATCCATTTGGGAGACAAGAAACATAAGTGCACAGTTTGTGACAAAGG
ATTTGTCCGCAAAGATCATTTGAATAGTCATATGAAGGTACATTTGGGTG
ATGGCTCAAAATACACATGCCCAATCTGTATGAAAGTCTTCCGTTTGAAA
CAAATGTATATTAAACACATGAATCTACATGGGCTTGAACAGGCTCAACA
ACCTGTATGACACgcatttacttttatttaaatttgtcatcaattttttt
tgttttcattttttgaaagggatttttttttgaacatagcatttatttat
tataatattttatcaaagtcctaattattattaatattacctttatttgt
tatttcaaataatattttgatattatactcgtttattattatattataat
attttgatataGATAGTTTGTCATCTTTCTAATAGTATACTTAGTGCGCA
ATTTCATGTAGTTTATCTTTATCGTAATAACtatttttttgtgaatatta
ttttgttgttattaGTAGTAGTAttgtaatgaaaaaaaaaacagaattta
CCATAATTTTAATCGTATTTTTTAAACCAAAAGTAACATCGTGAAGAGTA
GAGGCTCGATTTATAACACGCTAATGtataatgttttttgttttttcgag
aaaattaattTATCAGAGAGAAAGTTATCTTGATATACTTACTAGTCGGT
ATTATAGAATAGGaataattttaatagattgccattcgtttttttttttt
tttccatttttttagtaTACAATAATAAGTCATTGCCCTGCTGTAAAGTA
GGGTTTAAGGACGGATTATAAAATGATTAGGTATAGTCTCTCTCCCACTG
tatctctttttctttgttattcTGTTACCTTTGTTATGTGACAACAGTGA
CTTCATACCAAAAGTCCTTATTCTAATTtatgaactttttttctaatgaT
CACAAGGAAACCTGAAAGTTCAAgaattataaataaaatatagGGATGTT
GTGTCACTTTAGTCACTTTCTGTCTCTTGGGGGAAGTGATGTGTGAACAG
TTGGCAGTATTTGAAGCTAAATGCTTATTAAGACTCTTGattaattttat
aagaacattttaagactttttacAGAACAAAAGATTCATTGTATAGAACA
AAAGGACTATCCCTAAATTAATTTTCACTAGTTCTTATCATACAATAAAA
GAGGTCGATTGCGTAAAAGATTGAGAGAGTATATCTTGACTCTTGACATG
ATCGTCATCTGGGCCGGATCAATTCtcttaataaaaaaagtttgaaagat
gaGGGTCCATTTTTTTCTCATTGacataataataaaaattactCATTGTT
TTAGTTATGTGGAAAAAATTTGGTCAACTGTGAGAATTTATGAAATGcta
taaaatacaattttgataAGGGAGGATTTGTAGAACTTTGTTATTTATCC
AGCTTCTCAGTACAAGAgggattttttctgatttctttaaCAGTCCAAGT
ACTATtcgttttgaaaaatattttacaaaaattttccataaTATTTACCA
AGTAGTTGTACTTAAAGAACAGAAAGGGTCAAACTCATAATATAACACAA
AAAGAGACTAATAGTGTACGCCTTTTTCCTGTTAaattataaaagttttt
tttaatatgtcAACGACCTTTCAAAACCGCAAATTGTgtcatatttttaa
aaaaagggcAATTGTCAAgtggaaaactttttgtttccCTGTTTTTACGA
TGGTGATGATGACTTCCATTTTGCCTACTATGAACTTACTATCAACGATT
TATTTACTAACTAGCTTTATTTTAATGAACAAAATagtttattgtatttt
ttgtgtgcattatttttatttattattgatCATTTTACATGATTATATTT
TGAATGTTATAAAATTTGGGTATCACCTCCAATGATGAAAGTGTCTTGTG
CTCTTAATATTGAGTTTATTATCTTATCATTGGGCCATCAGGCATTTTTA
GATTATCCAAATTACATATAATTCTTGGAGAGGGAACCTAAGGGATTTTA
GAACGAAAAATCTTTGCCTCAAGTAGATTGCTCCGTTTCGTGTGAATGAA
TTTTGATAGCATAAGTTTTCAGCATGATATTTTGctgaagaaatattttt
tatagaatATGAAAGAGATAAtcatgaaagatttttgagtttgttttttt
ttgtagtttctttttcatctttattaCCCTTATTTTTAAACCAAAAGGAT
AATTATTTTGTCCTCTTGTAAAATTTAATTTGTCAATGATTCGTGATAGA
TTTCCTGACGTGAATTTTTATTTGGcttcgatttttttcttttccaaact
GGTAACATCTATTATAAAGTTCTTAATTCGCCTCCAAAGGGGTCAAATAC
GTCAATTTAAGTGTCGCATGTTTATGAATCAAtcacaaaaagaaatttaa
ttgtTGCCCTTTTACcttaatcttttgaaattttttattgtcCTTGTAAA
AAAAGTATTAAGAGGTTAATTGATGTTTTGGTAATGTTGTCAAAGTTTTT
CAGCCCTATGGTGTTTTTGAAttacaataaaaaagtaattacaAATCCTG
TTATCCCTCTTTCATTTCAATTAAGCAAAAGGACCCTTCAAGGAGGGATC
CATCAAAGTATTTCCTTTACTCTAAGCAGGAGACAATAGAATCTTAATTA
CTAAAGATTTTcgcttttcttttgattttcttttaatgGGTATGTGACTT
CAATCGTAATTTTCCTGCTTTTTAGTCAAAAACAGGAGTTTAGTCAGACC
TCAAGTTGCCATCCTATCACTAATTAGTGCTTTCCTAAAGGAATTTATTT
GCc
Run BLAST on NCBI

protein sequence of TCONS_00052817-protein

>TCONS_00052817-protein ID=TCONS_00052817-protein|Name=TCONS_00052817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MVESDFTMVGASRRKTRLPRKILRVKQDDGHVKLEPQENCYKSDDQMMES
DDIPSPSSSPQSNDQYNDSFYDKYDTNRYNTAYVGGEYLKEATKLFLKSQ
TTSDYIVVQPSYDDQPPVISSEPDVKISSPPRDDHDVRDTREHGDRIKTY
NPVKKQYYQKHHIPNLTKKHHHPEPTPDNPYQCETCDMLFKNLELLSDHQ
KTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRK
DHLRSHLQTHYNRKYGCKLCGKSFKTIELYHRHVKTHKELDHLSEINNLE
NLLPELERYDSPKLDRYSPKLDRYDSPKLDRYDSPIPSSRPTHHHYTPAP
EITRELIAPPVVKHERMNERLDDSRGEDSPWNRSGSPTYSDISGSSFSQS
SPRGMDYGSANENTDVLKRVLSYRCGFCNATFEDKESVTIHERKCRAETQ
KWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSK
ELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCD
KGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQA
QQPV
Run BLAST on NCBI

transcript from alignment at scaffold_220:375996..383817+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052817 ID=TCONS_00052817|Name=TCONS_00052817|organism=Clytia hemisphaerica|type=transcript|length=7822bp|location=Sequence derived from alignment at scaffold_220:375996..383817+ (Clytia hemisphaerica)
AAGAAAATTATTCCCCCAAATAACAAGCCCTATTTTGTCGTTAtaattca
agtaaaaaaaattttttgacagtttCTTATAAATAACCGGTAAACGATAT
ACGTAATAGGCGCGTGTTGAATAGATCAATTATATGAGAACAATAGTATC
ATTTCATCTCGTTGCCGGCAATTTGAATTGTATTGTTTTTGCTCACTCGG
AAAGTTTGTGGCAACGCAGTTTATAGAAAGTTTTGATACAGACGGATGAA
TGTTATTATAGCGAAACGGGCAAGAATAAGGccgtaaagaaaaaaaagta
tttttgggtttttgtcTGTTGTTGTTTCAAAGTGCTGTAGTCAAAACTTG
AACAAAGTTTTTTATGAGTGTTACATACATAAAAAACTGACGAAAATGGT
TGAATCAGATTTTACCGTAAGTTCATTTAAATTATGATTATATTTTTATT
CTGATATTCTGAAGGTTGTGAGCCCTTTTTGACcttattagtaatttttt
tcacaaaaaaatgaaCAGTCGATATAAGAAACGTGTTTTAACATACAAGG
AAGTATATACTATATCAAACATTTCTCTAATGTTTACATTTcgatttatg
atattttttctgTTTGTATTAAGATATATATGTTAACAATGTATTTTGAC
GGATTGATGGATGCCTTTGGAAAGTGTCACTTTTCTTAAGATGACTTTTT
TTGCTACATTTCTGGGTGGAGAGCTTTGAGTTTCAAATGGGCAAATCTAT
CCTGTTATAactcttaaaagttttattgactttTTCTAGGAACCCCATTT
TTGCTTTTCTGCACTTTTTTATTTGGAAACCCCAAATCCTGATCTTGAAG
TTTATTTTTGCATCAGCCCATTTTGTACCTGCTGAAGGCTTTTAAATGAA
AAGGTTGGGGATCCCACTGGGATTTTTTTCACTGATGTTTTCAAAACTGT
AGGAAGGACTGTAGGGAAATAAATACAAAACTTTGTTCGAAGGGGTCGAA
GTATAAAGTTTTTCCAAGGGaagtataaaaacaaaacaattcaaacaTTA
TTGTTTTTGGTTTCATCACCAAATGAttgttcaaatatttttattttcat
gccAAGGAACTTACGTATAATAACTGTTTCAGGAGTTTTTTTAGGAGTTG
TCCCCTTAaaaccttctttttttaaagaataagaaaattttCCTTATTCT
GTAAGGATTGATGGTTCTGAATTGTGGtggtcaaattttttctggagtAA
GGTTGAATTAAAACACAAACTTAATCTTGTCTgctctgagaaaaaaaaac
ccaAAGATTTAATTCACCCAAGacccttttttttattttgatctcttttt
tctttgtaattcaaACCAATTGAAAACAGACGAACGTACCAGGAGATTCT
GTTAAAAAAAGGGGTGGATTTCACCTTAGATACTTAATTCCAATACATAG
AGCTATTTAAAAATAGGGGTGTTGAAAAAGTAAGTACTGAACACTTTATT
CATAATTTCTTTGGGGAAAAAAAGAATCTAGGctattttcaagctaaaac
aaCACTAATTACTCTAACTTGACTTATTAggcaattttcaaaacaatatg
aTGCTATTAAGTAAATCTCTATGGATTTTTTTATTCCCTTCTTTTTAATT
TACTGTAATATTATAAGCATTAGTCGTTATATGATGATGGGAAAGGGGTC
TTTTATTTTCCTACATGATTATTTTAAACCCTTGAGTATTTTGGTTGCAA
CTAGCTGTGCTGTTTATTTTTCGATGTTAGTTCAGCAGTACCATGAGCTT
TgcattcctttgtatttattttacaGACCTTTTTTagtgttctttttatt
tgctcGTTTCGCCAAGAGTGATGTGCTGAATCTTGTGTGTTGTCTTCTTT
CGATAaataaatttcgttttttttttgtgaaggcgtgcatttttattttt
tcaacctTTCAGTAAAGGTAGTCAGGGCAAGAGattgaaaaggaagaaaa
aagatttttaacaaCGGCTGACTTTGATTGCcatttttttgataataatt
CATAAAGTTAATTGCGCTTTCTGTAAAAGGTAATAACAGTTTTATAATGA
TGAGCTATTAggcaaatttttcttttctctttttcttttcctgaTTTGAT
TGACGTTTTGACTGTCAGCACTTTAGGGAGTTAGGAATTGAAAAGTCACT
CCTGGATCTTCTAAAGTCTTTGTATTTATGGCCTTTTATATAtcgattta
ttatttttatatgtTTCTTTTACAtaatattcttcttttttctttaatta
taATAGATGGTTGGAGCGTCTAGACGAAAAACAAGACTTCCCCGCAAGAT
TTTGCGAGTGAAACAAGACGATGGACATGTTAAACTCGAGCCTCAAGAAA
ATTGCTATAAATCAGGTATATAATAAGAGTTATTAAACTTTCCCTATTTA
AAATATTGGATAACTTCCCTctaaattttattaattttgtttaGGGTTTC
CCTTTTTAACTTCCTTTACTTTTCATATGATTCTTCAAACGAACTTCCTT
GTTTAACTTTTCCTCTACCTAATTGCATTCAAAGAAAAAGGCGTTTTTTA
AGCCCCTGTCGGTATTAAAAGACTTAAAGATCTTTTAATGAAATTCTATA
TTTTTACCCCTTTTTTGTATCTGCctgtaaaatctttgaaaaggtgTGAA
AAAATACTATTATTATTAATAGTTTAGTGGTAATAAAGAAACTCTTTGac
tttttatcccccttttttaaTGTGTGCTTGAAGACTTTATTTATAGTACT
AATTAGGGACTTCTAAAAGGGgcctcaaatctttttttgctagGATATCT
TGCGAATTTTTCTTCCTTGATCTTATAAATTATGAATTCCATATTAAAAC
ATTGTTTTATGAAGGATCTGTTAAAGAATCAAATCATCTTTGTATTCACA
GTTGCTTCTGAGACTCTTTTCCTTGTTCCTTCTTCCCCTAAATTGTAAAA
CAGGAAAAATTACCCCTTAAAAAAGAACAGGGAAAAAATAGCCCCTTTCT
TATTCTTCATTTATTTACTCCCAATTTTTTTCCTGCTTCTTCTAGATGAC
CAAATGATGGAATCTGATGATATCCcgtctccttcttcttctcctcaATC
AAATGACCAATACAATGATAGTTTTTACGACAAATATGATACAAATCGTT
ACAACACTGCCTATGTTGGTGGTGAGTACCTGAAAGAAGCCAcaaagctt
ttccttaaatctCAAACCACTTCAGATTACATTGTTGTACAGCCATCCTA
TGATGATCAACCTCCAGTCATCTCGTCAGAACCTGATGTCAAAATCTCGT
CACCACCAAGAGATGATCATGATGTCAGAGATACTAGAGAACATGGAGAT
CGAATCAAAACATACAATCCTGTCAAGAAACAATATTACCAGAAACATCA
TATACCAAACTTAACCAAGAAGCATCATCACCCTGAACCAACACCAGATA
ATCCTTACCAATGTGAAACTTGTGATATGCTTTTCAAGAATCTAGAGCTT
CTGTCTGACCATCAAAAGACAGTTCATGATAACAACAGGCAATTTGCTTG
CAGATACTGTGGCAAACGCTTCAATGATAAATATAATATGCGGAAGCATG
TTTTGATTCATGTTGGTGAAAAGCGTCACAAGTGTCAATTCTGTGAAAAA
GCATTTTTAAGAAAAGATCACTTGAGGAGTCACTTGCAGACCCATTACAA
CAGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCTTCAAAACAATTGAGC
TTTACCACAGGCACGTCAAAACACATAAAGAATTAGACCACCTGTCTGAA
ATTAACAATTTAGAAAATCTCCTGCCAGAATTGGAGAGATATGATAGCCC
AAAACTTGACAGATACAGTCCTAAACTTGACCGATACGACAGCCCTAAAC
TTGATCGATATGACAGCCCAATTCCAAGCAGTAGACCAACTCACCATCAC
TATACACCTGCACCAGAAATCACAAGGGAACTTATTGCACCACCTGTTGT
CAAGCATGAACGCATGAATGAAAGGCTGGATGATTCAAGAGGGGAGGACT
CACCATGGAACCGTAGTGGTAGCCCAACCTACTCAGATATCAGTGGTAGC
TCATTTTCACAATCAAGTCCTAGAGGGATGGACTATGGAAGCGCAAACGA
AAATACAGATGTACTGAAGAGAGTATTGTGTAAGTAGTGGTTCTTCTTCT
AGACTATGTTTTCAATCATGAGAAAAAGGGGAAATATCTTTCAACATTGA
TGTGGACTAATTTAGGCATCTGAGGGTTTCTGTCCTTTTTCCCATGAAGA
GAGTCTCATATGCAGATGTTTTTATAAAGGTTTTATGGTCAAAACACACA
GAAATAACTGTATCTCTTTCaattttgttctttatttttatcttaattTA
TCCTTGAAAAAATAAGGCTTTTCCCCTTattttttccaaggaaattttgg
tttttgttcTAGTTTATTGAAAGTTGAGATTAAGAAAAGCAGAGAAAGAA
GTACTttacaattgaaaaaatatccttaTTATTGTTTGgacttattttta
attttttgtcaatttctttcatttttagcaTACAGATGTGGATTTTGCAA
TGCTACTTTTGAAGACAAAGAATCTGTGACAATACATGAAAGAAAATGTC
GAGCTGAGACCCAAAAATGGCAATGTGTCAAATGCAACATTGTTTTTGAT
GAACCTGgtacgttgaaacaacattatGAGAAAGTCCATTCCACTGAAAA
ACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAAACCTGTGACATCAACT
ACCCCAATTCAAAAGAGCTCAGCCGCCATTATGCAAGTGCCCATAAGGAT
GCACAAATCTTCCCATGTTCTGAATGCCCGAAAACCTTTACTGTATGGCA
TAACCTGAAGAAACATATGCTCATCCATTTGGGAGACAAGAAACATAAGT
GCACAGTTTGTGACAAAGGATTTGTCCGCAAAGATCATTTGAATAGTCAT
ATGAAGGTACATTTGGGTGATGGCTCAAAATACACATGCCCAATCTGTAT
GAAAGTCTTCCGTTTGAAACAAATGTATATTAAACACATGAATCTACATG
GGCTTGAACAGGCTCAACAACCTGTATGACACgcatttacttttatttaa
atttgtcatcaattttttttgttttcattttttgaaagggattttttttt
gaacatagcatttatttattataatattttatcaaagtcctaattattat
taatattacctttatttgttatttcaaataatattttgatattatactcg
tttattattatattataatattttgatataGATAGTTTGTCATCTTTCTA
ATAGTATACTTAGTGCGCAATTTCATGTAGTTTATCTTTATCGTAATAAC
tatttttttgtgaatattattttgttgttattaGTAGTAGTAttgtaatg
aaaaaaaaaacagaatttaCCATAATTTTAATCGTATTTTTTAAACCAAA
AGTAACATCGTGAAGAGTAGAGGCTCGATTTATAACACGCTAATGtataa
tgttttttgttttttcgagaaaattaattTATCAGAGAGAAAGTTATCTT
GATATACTTACTAGTCGGTATTATAGAATAGGaataattttaatagattg
ccattcgtttttttttttttttccatttttttagtaTACAATAATAAGTC
ATTGCCCTGCTGTAAAGTAGGGTTTAAGGACGGATTATAAAATGATTAGG
TATAGTCTCTCTCCCACTGtatctctttttctttgttattcTGTTACCTT
TGTTATGTGACAACAGTGACTTCATACCAAAAGTCCTTATTCTAATTtat
gaactttttttctaatgaTCACAAGGAAACCTGAAAGTTCAAgaattata
aataaaatatagGGATGTTGTGTCACTTTAGTCACTTTCTGTCTCTTGGG
GGAAGTGATGTGTGAACAGTTGGCAGTATTTGAAGCTAAATGCTTATTAA
GACTCTTGattaattttataagaacattttaagactttttacAGAACAAA
AGATTCATTGTATAGAACAAAAGGACTATCCCTAAATTAATTTTCACTAG
TTCTTATCATACAATAAAAGAGGTCGATTGCGTAAAAGATTGAGAGAGTA
TATCTTGACTCTTGACATGATCGTCATCTGGGCCGGATCAATTCtcttaa
taaaaaaagtttgaaagatgaGGGTCCATTTTTTTCTCATTGacataata
ataaaaattactCATTGTTTTAGTTATGTGGAAAAAATTTGGTCAACTGT
GAGAATTTATGAAATGctataaaatacaattttgataAGGGAGGATTTGT
AGAACTTTGTTATTTATCCAGCTTCTCAGTACAAGAgggattttttctga
tttctttaaCAGTCCAAGTACTATtcgttttgaaaaatattttacaaaaa
ttttccataaTATTTACCAAGTAGTTGTACTTAAAGAACAGAAAGGGTCA
AACTCATAATATAACACAAAAAGAGACTAATAGTGTACGCCTTTTTCCTG
TTAaattataaaagttttttttaatatgtcAACGACCTTTCAAAACCGCA
AATTGTgtcatatttttaaaaaaagggcAATTGTCAAgtggaaaactttt
tgtttccCTGTTTTTACGATGGTGATGATGACTTCCATTTTGCCTACTAT
GAACTTACTATCAACGATTTATTTACTAACTAGCTTTATTTTAATGAACA
AAATagtttattgtattttttgtgtgcattatttttatttattattgatC
ATTTTACATGATTATATTTTGAATGTTATAAAATTTGGGTATCACCTCCA
ATGATGAAAGTGTCTTGTGCTCTTAATATTGAGTTTATTATCTTATCATT
GGGCCATCAGGCATTTTTAGATTATCCAAATTACATATAATTCTTGGAGA
GGGAACCTAAGGGATTTTAGAACGAAAAATCTTTGCCTCAAGTAGATTGC
TCCGTTTCGTGTGAATGAATTTTGATAGCATAAGTTTTCAGCATGATATT
TTGctgaagaaatattttttatagaatATGAAAGAGATAAtcatgaaaga
tttttgagtttgtttttttttgtagtttctttttcatctttattaCCCTT
ATTTTTAAACCAAAAGGATAATTATTTTGTCCTCTTGTAAAATTTAATTT
GTCAATGATTCGTGATAGATTTCCTGACGTGAATTTTTATTTGGcttcga
tttttttcttttccaaactGGTAACATCTATTATAAAGTTCTTAATTCGC
CTCCAAAGGGGTCAAATACGTCAATTTAAGTGTCGCATGTTTATGAATCA
AtcacaaaaagaaatttaattgtTGCCCTTTTACcttaatcttttgaaat
tttttattgtcCTTGTAAAAAAAGTATTAAGAGGTTAATTGATGTTTTGG
TAATGTTGTCAAAGTTTTTCAGCCCTATGGTGTTTTTGAAttacaataaa
aaagtaattacaAATCCTGTTATCCCTCTTTCATTTCAATTAAGCAAAAG
GACCCTTCAAGGAGGGATCCATCAAAGTATTTCCTTTACTCTAAGCAGGA
GACAATAGAATCTTAATTACTAAAGATTTTcgcttttcttttgattttct
tttaatgGGTATGTGACTTCAATCGTAATTTTCCTGCTTTTTAGTCAAAA
ACAGGAGTTTAGTCAGACCTCAAGTTGCCATCCTATCACTAATTAGTGCT
TTCCTAAAGGAATTTATTTGCc

Coding sequence (CDS) from alignment at scaffold_220:375996..383817+

>TCONS_00052817 ID=TCONS_00052817|Name=TCONS_00052817|organism=Clytia hemisphaerica|type=CDS|length=7260bp|location=Sequence derived from alignment at scaffold_220:375996..383817+ (Clytia hemisphaerica)
ATGGTTGAATCAGATTTTACCATGGTTGGAGCGTCTAGACGAAAAACAAG
ACTTCCCCGCAAGATTTTGCGAGTGAAACAAGACGATGGACATGTTAAAC
TCGAGCCTCAAGAAAATTGCTATAAATCAGATGACCAAATGATGGAATCT
GATGATATCCcgtctccttcttcttctcctcaATCAAATGACCAATACAA
TGATAGTTTTTACGACAAATATGATACAAATCGTTACAACACTGCCTATG
TTGGTGGTGAGTACCTGAAAGAAGCCAcaaagcttttccttaaatctCAA
ACCACTTCAGATTACATTGTTGTACAGCCATCCTATGATGATCAACCTCC
AGTCATCTCGTCAGAACCTGATGTCAAAATCTCGTCACCACCAAGAGATG
ATCATGATGTCAGAGATACTAGAGAACATGGAGATCGAATCAAAACATAC
AATCCTGTCAAGAAACAATATTACCAGAAACATCATATACCAAACTTAAC
CAAGAAGCATCATCACCCTGAACCAACACCAGATAATCCTTACCAATGTG
AAACTTGTGATATGCTTTTCAAGAATCTAGAGCTTCTGTCTGACCATCAA
AAGACAGTTCATGATAACAACAGGCAATTTGCTTGCAGATACTGTGGCAA
ACGCTTCAATGATAAATATAATATGCGGAAGCATGTTTTGATTCATGTTG
GTGAAAAGCGTCACAAGTGTCAATTCTGTGAAAAAGCATTTTTAAGAAAA
GATCACTTGAGGAGTCACTTGCAGACCCATTACAACAGAAAATATGGCTG
CAAGCTCTGTGGCAAGAGCTTCAAAACAATTGAGCTTTACCACAGGCACG
TCAAAACACATAAAGAATTAGACCACCTGTCTGAAATTAACAATTTAGAA
AATCTCCTGCCAGAATTGGAGAGATATGATAGCCCAAAACTTGACAGATA
CAGTCCTAAACTTGACCGATACGACAGCCCTAAACTTGATCGATATGACA
GCCCAATTCCAAGCAGTAGACCAACTCACCATCACTATACACCTGCACCA
GAAATCACAAGGGAACTTATTGCACCACCTGTTGTCAAGCATGAACGCAT
GAATGAAAGGCTGGATGATTCAAGAGGGGAGGACTCACCATGGAACCGTA
GTGGTAGCCCAACCTACTCAGATATCAGTGGTAGCTCATTTTCACAATCA
AGTCCTAGAGGGATGGACTATGGAAGCGCAAACGAAAATACAGATGTACT
GAAGAGAGTATTGTcaTACAGATGTGGATTTTGCAATGCTACTTTTGAAG
ACAAAGAATCTGTGACAATACATGAAAGAAAATGTCGAGCTGAGACCCAA
AAATGGCAATGTGTCAAATGCAACATTGTTTTTGATGAACCTGgtacgtt
gaaacaacattatGAGAAAGTCCATTCCACTGAAAAACCTGTTCAAAGTC
CATCCAGGTGGCGTTGTAAAACCTGTGACATCAACTACCCCAATTCAAAA
GAGCTCAGCCGCCATTATGCAAGTGCCCATAAGGATGCACAAATCTTCCC
ATGTTCTGAATGCCCGAAAACCTTTACTGTATGGCATAACCTGAAGAAAC
ATATGCTCATCCATTTGGGAGACAAGAAACATAAGTGCACAGTTTGTGAC
AAAGGATTTGTCCGCAAAGATCATTTGAATAGTCATATGAAGGTACATTT
GGGTGATGGCTCAAAATACACATGCCCAATCTGTATGAAAGTCTTCCGTT
TGAAACAAATGTATATTAAACACATGAATCTACATGGGCTTGAACAGGCT
CAACAACCTGTATGAATGGTTGAATCAGATTTTACCATGGTTGGAGCGTC
TAGACGAAAAACAAGACTTCCCCGCAAGATTTTGCGAGTGAAACAAGACG
ATGGACATGTTAAACTCGAGCCTCAAGAAAATTGCTATAAATCAGATGAC
CAAATGATGGAATCTGATGATATCCcgtctccttcttcttctcctcaATC
AAATGACCAATACAATGATAGTTTTTACGACAAATATGATACAAATCGTT
ACAACACTGCCTATGTTGGTGGTGAGTACCTGAAAGAAGCCAcaaagctt
ttccttaaatctCAAACCACTTCAGATTACATTGTTGTACAGCCATCCTA
TGATGATCAACCTCCAGTCATCTCGTCAGAACCTGATGTCAAAATCTCGT
CACCACCAAGAGATGATCATGATGTCAGAGATACTAGAGAACATGGAGAT
CGAATCAAAACATACAATCCTGTCAAGAAACAATATTACCAGAAACATCA
TATACCAAACTTAACCAAGAAGCATCATCACCCTGAACCAACACCAGATA
ATCCTTACCAATGTGAAACTTGTGATATGCTTTTCAAGAATCTAGAGCTT
CTGTCTGACCATCAAAAGACAGTTCATGATAACAACAGGCAATTTGCTTG
CAGATACTGTGGCAAACGCTTCAATGATAAATATAATATGCGGAAGCATG
TTTTGATTCATGTTGGTGAAAAGCGTCACAAGTGTCAATTCTGTGAAAAA
GCATTTTTAAGAAAAGATCACTTGAGGAGTCACTTGCAGACCCATTACAA
CAGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCTTCAAAACAATTGAGC
TTTACCACAGGCACGTCAAAACACATAAAGAATTAGACCACCTGTCTGAA
ATTAACAATTTAGAAAATCTCCTGCCAGAATTGGAGAGATATGATAGCCC
AAAACTTGACAGATACAGTCCTAAACTTGACCGATACGACAGCCCTAAAC
TTGATCGATATGACAGCCCAATTCCAAGCAGTAGACCAACTCACCATCAC
TATACACCTGCACCAGAAATCACAAGGGAACTTATTGCACCACCTGTTGT
CAAGCATGAACGCATGAATGAAAGGCTGGATGATTCAAGAGGGGAGGACT
CACCATGGAACCGTAGTGGTAGCCCAACCTACTCAGATATCAGTGGTAGC
TCATTTTCACAATCAAGTCCTAGAGGGATGGACTATGGAAGCGCAAACGA
AAATACAGATGTACTGAAGAGAGTATTGTcaTACAGATGTGGATTTTGCA
ATGCTACTTTTGAAGACAAAGAATCTGTGACAATACATGAAAGAAAATGT
CGAGCTGAGACCCAAAAATGGCAATGTGTCAAATGCAACATTGTTTTTGA
TGAACCTGgtacgttgaaacaacattatGAGAAAGTCCATTCCACTGAAA
AACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAAACCTGTGACATCAAC
TACCCCAATTCAAAAGAGCTCAGCCGCCATTATGCAAGTGCCCATAAGGA
TGCACAAATCTTCCCATGTTCTGAATGCCCGAAAACCTTTACTGTATGGC
ATAACCTGAAGAAACATATGCTCATCCATTTGGGAGACAAGAAACATAAG
TGCACAGTTTGTGACAAAGGATTTGTCCGCAAAGATCATTTGAATAGTCA
TATGAAGGTACATTTGGGTGATGGCTCAAAATACACATGCCCAATCTGTA
TGAAAGTCTTCCGTTTGAAACAAATGTATATTAAACACATGAATCTACAT
GGGCTTGAACAGGCTCAACAACCTGTATGAATGGTTGAATCAGATTTTAC
CATGGTTGGAGCGTCTAGACGAAAAACAAGACTTCCCCGCAAGATTTTGC
GAGTGAAACAAGACGATGGACATGTTAAACTCGAGCCTCAAGAAAATTGC
TATAAATCAGATGACCAAATGATGGAATCTGATGATATCCcgtctccttc
ttcttctcctcaATCAAATGACCAATACAATGATAGTTTTTACGACAAAT
ATGATACAAATCGTTACAACACTGCCTATGTTGGTGGTGAGTACCTGAAA
GAAGCCAcaaagcttttccttaaatctCAAACCACTTCAGATTACATTGT
TGTACAGCCATCCTATGATGATCAACCTCCAGTCATCTCGTCAGAACCTG
ATGTCAAAATCTCGTCACCACCAAGAGATGATCATGATGTCAGAGATACT
AGAGAACATGGAGATCGAATCAAAACATACAATCCTGTCAAGAAACAATA
TTACCAGAAACATCATATACCAAACTTAACCAAGAAGCATCATCACCCTG
AACCAACACCAGATAATCCTTACCAATGTGAAACTTGTGATATGCTTTTC
AAGAATCTAGAGCTTCTGTCTGACCATCAAAAGACAGTTCATGATAACAA
CAGGCAATTTGCTTGCAGATACTGTGGCAAACGCTTCAATGATAAATATA
ATATGCGGAAGCATGTTTTGATTCATGTTGGTGAAAAGCGTCACAAGTGT
CAATTCTGTGAAAAAGCATTTTTAAGAAAAGATCACTTGAGGAGTCACTT
GCAGACCCATTACAACAGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCT
TCAAAACAATTGAGCTTTACCACAGGCACGTCAAAACACATAAAGAATTA
GACCACCTGTCTGAAATTAACAATTTAGAAAATCTCCTGCCAGAATTGGA
GAGATATGATAGCCCAAAACTTGACAGATACAGTCCTAAACTTGACCGAT
ACGACAGCCCTAAACTTGATCGATATGACAGCCCAATTCCAAGCAGTAGA
CCAACTCACCATCACTATACACCTGCACCAGAAATCACAAGGGAACTTAT
TGCACCACCTGTTGTCAAGCATGAACGCATGAATGAAAGGCTGGATGATT
CAAGAGGGGAGGACTCACCATGGAACCGTAGTGGTAGCCCAACCTACTCA
GATATCAGTGGTAGCTCATTTTCACAATCAAGTCCTAGAGGGATGGACTA
TGGAAGCGCAAACGAAAATACAGATGTACTGAAGAGAGTATTGTcaTACA
GATGTGGATTTTGCAATGCTACTTTTGAAGACAAAGAATCTGTGACAATA
CATGAAAGAAAATGTCGAGCTGAGACCCAAAAATGGCAATGTGTCAAATG
CAACATTGTTTTTGATGAACCTGgtacgttgaaacaacattatGAGAAAG
TCCATTCCACTGAAAAACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAA
ACCTGTGACATCAACTACCCCAATTCAAAAGAGCTCAGCCGCCATTATGC
AAGTGCCCATAAGGATGCACAAATCTTCCCATGTTCTGAATGCCCGAAAA
CCTTTACTGTATGGCATAACCTGAAGAAACATATGCTCATCCATTTGGGA
GACAAGAAACATAAGTGCACAGTTTGTGACAAAGGATTTGTCCGCAAAGA
TCATTTGAATAGTCATATGAAGGTACATTTGGGTGATGGCTCAAAATACA
CATGCCCAATCTGTATGAAAGTCTTCCGTTTGAAACAAATGTATATTAAA
CACATGAATCTACATGGGCTTGAACAGGCTCAACAACCTGTATGAATGGT
TGAATCAGATTTTACCATGGTTGGAGCGTCTAGACGAAAAACAAGACTTC
CCCGCAAGATTTTGCGAGTGAAACAAGACGATGGACATGTTAAACTCGAG
CCTCAAGAAAATTGCTATAAATCAGATGACCAAATGATGGAATCTGATGA
TATCCcgtctccttcttcttctcctcaATCAAATGACCAATACAATGATA
GTTTTTACGACAAATATGATACAAATCGTTACAACACTGCCTATGTTGGT
GGTGAGTACCTGAAAGAAGCCAcaaagcttttccttaaatctCAAACCAC
TTCAGATTACATTGTTGTACAGCCATCCTATGATGATCAACCTCCAGTCA
TCTCGTCAGAACCTGATGTCAAAATCTCGTCACCACCAAGAGATGATCAT
GATGTCAGAGATACTAGAGAACATGGAGATCGAATCAAAACATACAATCC
TGTCAAGAAACAATATTACCAGAAACATCATATACCAAACTTAACCAAGA
AGCATCATCACCCTGAACCAACACCAGATAATCCTTACCAATGTGAAACT
TGTGATATGCTTTTCAAGAATCTAGAGCTTCTGTCTGACCATCAAAAGAC
AGTTCATGATAACAACAGGCAATTTGCTTGCAGATACTGTGGCAAACGCT
TCAATGATAAATATAATATGCGGAAGCATGTTTTGATTCATGTTGGTGAA
AAGCGTCACAAGTGTCAATTCTGTGAAAAAGCATTTTTAAGAAAAGATCA
CTTGAGGAGTCACTTGCAGACCCATTACAACAGAAAATATGGCTGCAAGC
TCTGTGGCAAGAGCTTCAAAACAATTGAGCTTTACCACAGGCACGTCAAA
ACACATAAAGAATTAGACCACCTGTCTGAAATTAACAATTTAGAAAATCT
CCTGCCAGAATTGGAGAGATATGATAGCCCAAAACTTGACAGATACAGTC
CTAAACTTGACCGATACGACAGCCCTAAACTTGATCGATATGACAGCCCA
ATTCCAAGCAGTAGACCAACTCACCATCACTATACACCTGCACCAGAAAT
CACAAGGGAACTTATTGCACCACCTGTTGTCAAGCATGAACGCATGAATG
AAAGGCTGGATGATTCAAGAGGGGAGGACTCACCATGGAACCGTAGTGGT
AGCCCAACCTACTCAGATATCAGTGGTAGCTCATTTTCACAATCAAGTCC
TAGAGGGATGGACTATGGAAGCGCAAACGAAAATACAGATGTACTGAAGA
GAGTATTGTcaTACAGATGTGGATTTTGCAATGCTACTTTTGAAGACAAA
GAATCTGTGACAATACATGAAAGAAAATGTCGAGCTGAGACCCAAAAATG
GCAATGTGTCAAATGCAACATTGTTTTTGATGAACCTGgtacgttgaaac
aacattatGAGAAAGTCCATTCCACTGAAAAACCTGTTCAAAGTCCATCC
AGGTGGCGTTGTAAAACCTGTGACATCAACTACCCCAATTCAAAAGAGCT
CAGCCGCCATTATGCAAGTGCCCATAAGGATGCACAAATCTTCCCATGTT
CTGAATGCCCGAAAACCTTTACTGTATGGCATAACCTGAAGAAACATATG
CTCATCCATTTGGGAGACAAGAAACATAAGTGCACAGTTTGTGACAAAGG
ATTTGTCCGCAAAGATCATTTGAATAGTCATATGAAGGTACATTTGGGTG
ATGGCTCAAAATACACATGCCCAATCTGTATGAAAGTCTTCCGTTTGAAA
CAAATGTATATTAAACACATGAATCTACATGGGCTTGAACAGGCTCAACA
ACCTGTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033379XLOC_033379Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052817-exon-scaffold_220-1491911889:375996..376411TCONS_00052817-exon-scaffold_220-1491911889:375996..376411Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1510915933:375996..376411TCONS_00052817-exon-scaffold_220-1510915933:375996..376411Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1575043694:375996..376411TCONS_00052817-exon-scaffold_220-1575043694:375996..376411Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1491911889:378302..378410TCONS_00052817-exon-scaffold_220-1491911889:378302..378410Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1510915933:378302..378410TCONS_00052817-exon-scaffold_220-1510915933:378302..378410Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1575043694:378302..378410TCONS_00052817-exon-scaffold_220-1575043694:378302..378410Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1491911889:379091..380224TCONS_00052817-exon-scaffold_220-1491911889:379091..380224Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1510915933:379091..380224TCONS_00052817-exon-scaffold_220-1510915933:379091..380224Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1575043694:379091..380224TCONS_00052817-exon-scaffold_220-1575043694:379091..380224Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1491911889:380624..383817TCONS_00052817-exon-scaffold_220-1491911889:380624..383817Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1510915933:380624..383817TCONS_00052817-exon-scaffold_220-1510915933:380624..383817Clytia hemisphaericaexon
TCONS_00052817-exon-scaffold_220-1575043694:380624..383817TCONS_00052817-exon-scaffold_220-1575043694:380624..383817Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052817-proteinTCONS_00052817-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:375996..383817 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.13951	2.10012	0.483142	0.549584	58.7143	44.3848	35.2754	36.2489	14.343	19.3202	9.39211	14.363	17.054	8.31408	8.37357	11.1783	15.2837	16.0539	3.87369	7.94561	8.12613	9.31107	6.816	6.80268	6.12702	7.11128	48.6361	43.96	27.0359	30.0789
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00052817 vs. Swiss-Prot (Human)
Match: ZNF91 (Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 2.910e-27
Identity = 115/438 (26.26%), Postives = 181/438 (41.32%), Query Frame = 3 
Query:  921 TPDNPYQCETCDMLFKNLELLSDHQKTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRKDHLRSHLQTHYNRK-YGCKLCGKSFKTIELYHRHVKTHKELDHLSXXXXXXXXXXXXXRYDSPKLDRYSPKLDRYDSPKLDRYDSPIPSSRPTHHHYTPAPEIT-------RELIAPP-VVKHERMNERLDDSRGEDSPWNRSGSPTYXXXXXXXXXXXXPRGMDYGSANENTDVLK--RVL-----SYRCGFCNATFEDKESVTIHERKCRAETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGL 2186
            T + PY+CE C   F     L+ H++ +H   + F C+ CGK F     + +H  IH GEK +KC+ C KAF R   L  H   H   K Y CK CGK+FK      +H   H   + L +         +     + K+     K  +  S + D+  + I SS  T H      E T       +    P  +  H+RM+      + E+     S S T +        +   +  + G A   +  L   +++      Y+C  C   F    ++T H R    E + ++C +C   F+    L  H + +H+ EKP      ++C+ C   + +S  L+ H    H   + + C EC K F+    L +H  +H G+K +KC  C K F     L  H  +H G+   Y C  C K F    +   H  +H +
Sbjct:  737 TGEKPYKCEECGKAFNWSSSLTKHKR-IHTREKPFKCKECGKAFIWSSTLTRHKRIHTGEKPYKCEECGKAFSRSSTLTKHKTIHTGEKPYKCKECGKAFKHSSALAKHKIIHAG-EKLYKCEECGKAFNQSSNLTTHKIIHTKEKPSK--SEECDK--AFIWSSTLTEHKRIHTREKTYKCEECGKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCEECGKAFRKSSTLTEHKIIHTGEKPYKCEECGKAFSQSSTLTRHTRMHTGE-KPYKCEECGKAFNRSSKLTTH-KIIHTGEKP------YKCEECGKAFISSSTLNGH-KRIHTREKPYKCEECGKAFSQSSTLTRHKRLHTGEKPYKCGECGKAFKESSALTKHKIIHTGE-KPYKCEKCGKAFNQSSILTNHKKIHTI 1158

HSP 2 Score: 117.472 bits (293), Expect = 3.839e-26
Identity = 117/488 (23.98%), Postives = 195/488 (39.96%), Query Frame = 3 
Query:  921 TPDNPYQCETCDMLFKNLELLSDHQKTVHDNNRQFACRYCGKRFNDKYNMRKHVLIHVGEKRHKCQFCEKAFLRKDHLRSHLQTHYNRK-YGCKLCGKSFKTIELYHRHVKTHKELDHLSXXXXXXXXXXXXXRYDSPKLDRYSPKLDR----YDSPKLDRYDSPIPSSRPTHHHYTP--APEITRELI-APPVVKHERMNERLDDSRGEDSPWNRSGSPTYXXXXXXXXXXXXPRGMDYGSA-------NENTDVLKRVLSYRCGFCNATFEDKESVTIHE--------RKCR-------------------AETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQ----------------------SPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQ 2192
            T + PY+CE C   F +   L+ H++ +H   + + C  CGK F+    + KH  IH GEK +KC+ C KAF     L +H  TH   K Y CK C K+FK +      +  HK +    ++   E       R  +  + ++    ++     +  K   + S +   +  H    P    E  +  I +  + +H+R++      + E+       S T +        +   +  + G A       N++  +  R   Y+C  C   F+   ++T H+         KC                       + ++C +C   F    TL++H +++H+ EKP +                          ++CK C   + NS  L+ H  + H + + + C EC KTF     L KH +IH G+K +KC  C K F R  +L  H  +H G+   Y C  C K F       KH  +H  E+
Sbjct:  289 TGEKPYKCEECGKAFSHSSTLAKHKR-IHTGEKPYKCEECGKAFSRSSTLAKHKRIHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKAFKRLST----LTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRFHTREKPFKCKECGKAFIWSSTLTRHKRIHTGEKPYKCEECGKAFRQSSTLTKHKIIHTGEKPYKFEECGKAFRQSLTLNKHKIIHSREKPYKCKECGKAFKQFSTLTTHKIIHAGKKLYKCEECGKAFNHSSSLSTHKIIHTGEKSYKCEECGKAFLWSSTLRRH-KRIHTGEKPYKCEECGKAFSHSSALAKHKRIHTGEKPYKCKECGKAFSNSSTLANHKIT-HTEEKPYKCKECDKTFKRLSTLTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGE-KPYKCEECGKAFNWSSSLTKHKRIHTREK 768

HSP 3 Score: 83.5741 bits (205), Expect = 8.580e-16
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 3 
Query: 1662 YRCGFCNATFEDKESVTIHERKCRAETQKWQCVKCNIVFDEPGTLKQHYEKVHSTEKPVQSPSRWRCKTCDINYPNSKELSRHYASAHKDAQIFPCSECPKTFTVWHNLKKHMLIHLGDKKHKCTVCDKGFVRKDHLNSHMKVHLGDGSKYTCPICMKVFRLKQMYIKHMNLHGLEQ 2192
            Y+C  C   F    ++T H+     E + ++C +C   F +  TL +H + +H+ EKP      ++C+ C   +  S  L+RH    H   + + C EC K F     L  H +IH G+K +KC  C K F+    LN H ++H  +   Y C  C K F       +H  LH  E+
Sbjct:  938 YKCEECGKAFSQSSTLTTHKIIHTGE-KPYKCEECGKAFRKSSTLTEH-KIIHTGEKP------YKCEECGKAFSQSSTLTRH-TRMHTGEKPYKCEECGKAFNRSSKLTTHKIIHTGEKPYKCEECGKAFISSSTLNGHKRIHTRE-KPYKCEECGKAFSQSSTLTRHKRLHTGEK 1104
The following BLAST results are available for this feature:
BLAST of TCONS_00052817 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF912.910e-2726.26Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE... [more]
back to top