Blg00892.0 (mRNA) - B. lanceolatum

Overview
NameBlg00892.0
Unique NameBlg00892.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:6056890..6058779-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00892.0 ID=Blg00892.0|Name=Blg00892.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1890bp|location=Sequence derived from alignment at Sc0000003:6056890..6058779- (Branchiostoma lanceolatum)
ATGGGACCGGTTACAAAATACGTGATCATCGCCGTTCTGATGTCTGAGGC CGTCGTGCGTTCCCAGGCGTTACGAGCGTGTGGGAGATGGCTGGCGTGCG ACTGCGATCCTACCGTCAACGCCGTGCACTGCAGCATGTTCAACCTCCGC GCAATGCCTACCGGGATACCAGCTTCCACCATCATCTTGGACCTATCGAA CAACATGATACCCGCAGCGGCCAATCAGTTTACGAACTTCTACCGCTTGC GGTATTTGGATTACAGCAGTAACGGTTTACAGGCCATTCCAGGTGGGACG TTCAACAACCTGAATCAGCTAGAGCTACTTGACCTTTCCGACAACCAGTT TATCAGTATCCCTTGTGGAATATTGAATCTGCTGCCGAAACTGCGCATTT TCAAGTTTTCAGGGAATCCTGTCTCGTCTTTTCCCGGTAACTGCTTCATG GGAATAAAGACTATCCAACAGCTCGATCTCTCCCGGATGAAGTTGGCTAG CGTCAGCGAGGATGCGTTCCAGTGGGTGCCGACACTGAACCAGTTGGACA TTTCGAGAAATCAGCTCCAAACGCTGAGCGCAGGATTCTGCCCGAACGGA GGCAACCTCATCCAAACGCTGCAGCTGTACGGGAACCCGTGGCTGTGTGA CTGTAACCTCCTGCAGCTGCAGCAGTGCACTAACATCACCCGTAACATAC GGTGCGCAGTTCCGAGGATGCTACGAGGGCTTGCTGCTGATATTCTCCTG CAGTTCGCCCCTGATAGACTTGTGTGTCCGGTCGCACCAATGTCCATCAA CCTTTCGTCCTCTGACGTCACCGCATACGTTGGTGACAGCCTGAGTATCA GCTGCAACTCACCTGGAGTGCGGAGCGACAAGATCACGTGGTTAAAGATG ACCGGTGACGTCAGAAGAACCCCGACGAGATCCATCCAATCAGGGCCGAT CTTGCCGTTCGCGCGTGTTCAGTTGGCTGATAGCGGAACGTACATCTGTG AAGCAGACAGCAACGCCTGGGCAGTGCTGACTTTGCGTGTTCTCCGGCCT CTCCCGACCACTACAACTCTCCCGAGTGTGACAACGCCACCCAACACGAC GGCACAGGTAGGAACAACAACAGGCCCGCCACCTACCGTTGTCACGACTG TGACTACGACTACGACTGTGGTGTCTACAGCAGTGAATACGTTTTCCTTG TCAGGCCTGGCTGTACAAAGCGGCGGAGCGAAACCGTTTGACTGGACGCT GCTCATCATTGCCGTGTCAGCGGCAGCGTTTACCGTCGTGGTTGTTGGCG TCGTGTCCGCAGTGGTGTACTGTATCTGGAAAAAGTCGCGTTGGAAAAGG AGGCTAAAGACATACGAAGGCCCTTCCCCCACGTCCGAGCTTGAGGCGTT TGATCACCTTTTTACCGGACACGACAGTGGGAGTCAGAACTCTACGCCGT CTAGTGGTTACGACTCCTCTCCTCTTAACCCTGACAGCGCGAAGAGCAGA CCCTGTTCTCCCTCGGTTCGGCAGCAGACGTCGCCAGCTGTTCCGTACGT CAACAGACACAAACGCCGAGCAAGCACCGAAGGCGACGTCGAAGCGTCGC AAGAAGCGCCAGGTGACGTCGTCGACGCCCCGTCACCGCGCCGTACCGAC AGACCATCGCCCGTCTCTCCGAGAAGCATCCGCGGACTGGCCTACCGTCC GAGCAGCGCGGGGAGCACGGGGAGTAACAGGAGAAGCGGAAGCGGAAATG CGAAAACTCTGAAGCGAACAGCACGCCGGGATAAAGGGGTTCGGCCGGTG AGAAAAGACGGAGAAAATATCCCCCTGAGGACAAGAGGCTCGAAGACTTC TCTTGGCCGCAGTGCTGCAGACGAGGAACATTATGTGTGA

Coding sequence (CDS) from alignment at Sc0000003:6056890..6058779-

>Blg00892.0 ID=Blg00892.0|Name=Blg00892.0|organism=Branchiostoma lanceolatum|type=CDS|length=1890bp|location=Sequence derived from alignment at Sc0000003:6056890..6058779- (Branchiostoma lanceolatum)
ATGGGACCGGTTACAAAATACGTGATCATCGCCGTTCTGATGTCTGAGGC
CGTCGTGCGTTCCCAGGCGTTACGAGCGTGTGGGAGATGGCTGGCGTGCG
ACTGCGATCCTACCGTCAACGCCGTGCACTGCAGCATGTTCAACCTCCGC
GCAATGCCTACCGGGATACCAGCTTCCACCATCATCTTGGACCTATCGAA
CAACATGATACCCGCAGCGGCCAATCAGTTTACGAACTTCTACCGCTTGC
GGTATTTGGATTACAGCAGTAACGGTTTACAGGCCATTCCAGGTGGGACG
TTCAACAACCTGAATCAGCTAGAGCTACTTGACCTTTCCGACAACCAGTT
TATCAGTATCCCTTGTGGAATATTGAATCTGCTGCCGAAACTGCGCATTT
TCAAGTTTTCAGGGAATCCTGTCTCGTCTTTTCCCGGTAACTGCTTCATG
GGAATAAAGACTATCCAACAGCTCGATCTCTCCCGGATGAAGTTGGCTAG
CGTCAGCGAGGATGCGTTCCAGTGGGTGCCGACACTGAACCAGTTGGACA
TTTCGAGAAATCAGCTCCAAACGCTGAGCGCAGGATTCTGCCCGAACGGA
GGCAACCTCATCCAAACGCTGCAGCTGTACGGGAACCCGTGGCTGTGTGA
CTGTAACCTCCTGCAGCTGCAGCAGTGCACTAACATCACCCGTAACATAC
GGTGCGCAGTTCCGAGGATGCTACGAGGGCTTGCTGCTGATATTCTCCTG
CAGTTCGCCCCTGATAGACTTGTGTGTCCGGTCGCACCAATGTCCATCAA
CCTTTCGTCCTCTGACGTCACCGCATACGTTGGTGACAGCCTGAGTATCA
GCTGCAACTCACCTGGAGTGCGGAGCGACAAGATCACGTGGTTAAAGATG
ACCGGTGACGTCAGAAGAACCCCGACGAGATCCATCCAATCAGGGCCGAT
CTTGCCGTTCGCGCGTGTTCAGTTGGCTGATAGCGGAACGTACATCTGTG
AAGCAGACAGCAACGCCTGGGCAGTGCTGACTTTGCGTGTTCTCCGGCCT
CTCCCGACCACTACAACTCTCCCGAGTGTGACAACGCCACCCAACACGAC
GGCACAGGTAGGAACAACAACAGGCCCGCCACCTACCGTTGTCACGACTG
TGACTACGACTACGACTGTGGTGTCTACAGCAGTGAATACGTTTTCCTTG
TCAGGCCTGGCTGTACAAAGCGGCGGAGCGAAACCGTTTGACTGGACGCT
GCTCATCATTGCCGTGTCAGCGGCAGCGTTTACCGTCGTGGTTGTTGGCG
TCGTGTCCGCAGTGGTGTACTGTATCTGGAAAAAGTCGCGTTGGAAAAGG
AGGCTAAAGACATACGAAGGCCCTTCCCCCACGTCCGAGCTTGAGGCGTT
TGATCACCTTTTTACCGGACACGACAGTGGGAGTCAGAACTCTACGCCGT
CTAGTGGTTACGACTCCTCTCCTCTTAACCCTGACAGCGCGAAGAGCAGA
CCCTGTTCTCCCTCGGTTCGGCAGCAGACGTCGCCAGCTGTTCCGTACGT
CAACAGACACAAACGCCGAGCAAGCACCGAAGGCGACGTCGAAGCGTCGC
AAGAAGCGCCAGGTGACGTCGTCGACGCCCCGTCACCGCGCCGTACCGAC
AGACCATCGCCCGTCTCTCCGAGAAGCATCCGCGGACTGGCCTACCGTCC
GAGCAGCGCGGGGAGCACGGGGAGTAACAGGAGAAGCGGAAGCGGAAATG
CGAAAACTCTGAAGCGAACAGCACGCCGGGATAAAGGGGTTCGGCCGGTG
AGAAAAGACGGAGAAAATATCCCCCTGAGGACAAGAGGCTCGAAGACTTC
TCTTGGCCGCAGTGCTGCAGACGAGGAACATTATGTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00892.0-exon-Sc0000003-1570713199:6056890..6058779Blg00892.0-exon-Sc0000003-1570713199:6056890..6058779Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00892.0Blg00892.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:6056890..6058779 -
Properties
Property NameValue
GeneIDBlg00892