|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5068333..5071630+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01080.0 ID=Blg01080.0|Name=Blg01080.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3298bp|location=Sequence derived from alignment at Sc0000003:5068333..5071630+ (Branchiostoma lanceolatum)
CACAAATTGACCAATCAGGAGTGACTTCGTCATCGGTCCTTTCCAGCTGA
TCCAAAATGGTGGGTACATGTTTACTTCAGAAACTGTTTAGAATCCGTGT
GAAATCGTTATTTTTATGAGCCATCTTGCTATCCCATGCGTTGCATGATG
TTCTAAGGGATATAAAGAATATTGTTGTCGGACGCATATTGTCCTCAAAG
TTGTTTTAGTTGTATGTAATGGCTGTAAAGTTGGGGGTGTTGCCGACCAG
GATATCTGAAACTGTCGACGTGTCACTATTTTGTTGATCAGCTGTGGCGT
TGTTAGTGGTTTTACGAGCTGAACCTTCTTCATTTCGATGATTTTCCTAC
AAATCTATACATACTTATTCTGTGAAAGTGAGAGAAGCGTTTTAATTATC
CGCAGCAAAGATTTATAACGTTCTTATAGTTGTACGCAAAGTTTCATAAT
TCTTTGCCCCTCCTCCTTTTTGAAACAATTTAATAATTTATCAAAACCAG
TGTAACCGTTAAGGAATAGATCACCAATTATTCAATTCCTTTTTACATAC
CCTTAAGTTGATGATTGAACTTTGGTTATGATTTTAATGTACTGTACCCT
AGTTAAAACAAAACAAACAATGCTTATAACATGTTACTATCTAAAATAAC
ATAGTAGTGTTCATCTGAGTATTTTAAAGGTTTTTAGGTTTCGCTGGCTT
TCTTTGATTGAGTCTTGTAAAACAGGTTTTTAATGAGATCAATGCATGTC
AAACTCAAAGGCACCGATATCGATTGTTTGCAAGCATAACAAATTAGCAA
GAAACAAAAGAGTGCGATTAGCGAACGGTAGACGGCGTCCCCACTTCCGA
AACTACAATGTAAACCCAAAATTTAGCCTATAGTTTTGGGTCATTTTACG
ATATAATCGGACAAGATTTTATACAATACACCGAACTTTACGATTATGGG
CGATACAGTTATGCATTGTTTTTACAATTGAGTGAATGGTAAATGGTTTG
GTGTTTTGGAATTCTATACAGATAGATAGACGAAATATACAGAAAAAAAG
TACATATATGACTTCTTTCCCTGCAGTCGTCGTCCCTTGAGTCCATGGCG
CGGTACATCAGCCCGGTGAACCCGGCGGTGTACCCCCACCTCACCCTGGT
GCTGATGGGCATCGGCATCTTCTTCATGGCGTGGTTCTTTGTGTATCCTT
TACATGGCTTTAAGTCTGGATGTTTACGAATGCTCATGGATATAAACAGA
CGAGTTTAAATGGGCAAACTTGCGAAATATATATACTGTATCAAACTTTC
AGAGATGGGAATACAAAAATATATGTCATGCATGAATGCTGTAGTGCTAT
ATACCTAAACTCAGGTTCGGATTCAGGTCTGGATGTTTACGAATGCTCTT
GAAAGGGTGTAAACAGTATGAATGGCCAAAAAAAAGAGATGGAAAGCTTT
GCAATTAGCTGGTTCATGGTTCAAACTGCACATGCAATGCATTGTGGGCA
GATTAAACGATGAACTGGCTTATATTTTTACAATAGAAAGTGTTAGCAAA
TGAAAATTTTGTTTAAAGTTGTCCACAGAAACTGTTGAAACAACAGAAAT
TTATAGTTCATGTACTGCATATGATGGTAACTCCAATAGATCCTTCTGAC
CTTCAAATTGTACCTTGGAGGAGATGAGGACACTAGTTTTACTGATGCAG
CATCTAGATTACTGTCATCTTACCAGTTTTCAAACCAGGAATTTAAACAG
ATACTTCTTGATTAGATCAAGGAAGCTAGGTACTCATTTTGACCTGAGTC
TAGTGAGGAAATAGTTGTTAAGTGCCTTTTGCTGCTATGGATTCAAACCA
AGAACCTTTTGATCCTAAGGCAACAACGCTAACAACACGACCACCTTCCC
AATGTTTGTGAAGATACATGTATGCTACTGACATCTTCTCTAGATGTGTA
TTGCTCCTTAACTAGTCCGTAGTTACGAGGTGACGTCTAACAAGTACACC
CGTGACCTGTACAAGGAGCTGCTGGTGTCCCTGGTGGCCTCCCTGTTCAT
GGGCTTCGGCGTGCTGTTCCTCTTACTCTGGGTCGGCATATATGTATAGC
AGGTAGGTTTCTGTTTCCTGAATTTTAACTTTGTTTTATAGGAAAAATTA
TTGACGTTTTGGTGACCACCTGTCACCTTCCTTAGGGCAATGGCTGGTTG
TGCTTCTCATGAACGGTGATGATAGGGGATTTAAAGTCAGGCACATTTAC
TTATGATTTAGGACTGCGACCTTCACACATTAGCAGCAAAACCTAGCTGC
AGTATGTAATAGAACTAGTCAGTATAACTGTATTGCCCTGAGGAAGGTGA
CAGTCAACGAGACACAGCGGATAGGTAAATAAGACTTTGTTGTGTACAAA
AGTAGCAAAGAGCTTTGTTACCCTGTGTTTTGAATTTTTATATGGCTGCA
ATTTTGATTCGGAATGACCAGGATAGATTTGTAAAAGTTATGTCAAAGCA
GATACTAGTATTGGGGTGCAAGATCATAGTAAGGTTTTCTGTTAGCTACA
TGTAGGCTTCTCTGACAGTCCTTCACCAAAATAGCCTGGCCATAAGCAAA
TGCTACTGTTTTTCACCCTATATCTGGTTGGAGATAGTGTAGAAGGCATA
TGGCTCAATCAATTTGCAACATCAGTCGTCTGTGATGCTTTTGCAAGCTC
TTTTTCAATTGGCACTGACTTATTATTTGCTTTTCTTTTCTATTTTCTTT
CTCATAGTTACCACTAGAGATGCAGCTATCATTTGGAGAAGGAACATTCC
AGGGCAAACTGCAACACTGAGGGAGTCACCATCATCTCTGCATCTATCTC
ATCACCGTGATCAGAGACGTCAAATCAGACACTATGGACACTATGATAAA
TCTTTGAAACCCAATGATCTGAAAGAATGTAACAAATGAATGCCGCATTT
GTACATTGTCACAGAAAGAATCATATTCAAAGCAGATACTAGTGTTACTT
TGAGCAATTTTAGAGTATGGACTCATTACGTAAAAGGCATAAATACATGT
GACTTGGCATGATTTTTTATTATGTCTTTATTGATGAATAAATTTATTTG
TACAAACATTACATGCACTCTTGTCATGATTATAGTTTTCACCCCGTCCA
ATCAAATCTGGACATTCCTTTTGAAAGCGTACATTATTCCTCTCGTACTG
TCGTACATTCCTCTGAAAAAGTGACTATCAGTCAGACTATCATATTATCT
TCACCATGTACAACAATTATAGTGTTATGGTACATCAATCACTCGGTA Coding sequence (CDS) from alignment at Sc0000003:5068333..5071630+ >Blg01080.0 ID=Blg01080.0|Name=Blg01080.0|organism=Branchiostoma lanceolatum|type=CDS|length=246bp|location=Sequence derived from alignment at Sc0000003:5068333..5071630+ (Branchiostoma lanceolatum)
ATGTCGTCGTCCCTTGAGTCCATGGCGCGGTACATCAGCCCGGTGAACCC
GGCGGTGTACCCCCACCTCACCCTGGTGCTGATGGGCATCGGCATCTTCT
TCATGGCGTGGTTCTTTGTTTACGAGGTGACGTCTAACAAGTACACCCGT
GACCTGTACAAGGAGCTGCTGGTGTCCCTGGTGGCCTCCCTGTTCATGGG
CTTCGGCGTGCTGTTCCTCTTACTCTGGGTCGGCATATATGTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01080.0-exon-Sc0000003-1570713199:5068333..5068391 | Blg01080.0-exon-Sc0000003-1570713199:5068333..5068391 | Branchiostoma lanceolatum | exon |
| Blg01080.0-exon-Sc0000003-1570713199:5069409..5069524 | Blg01080.0-exon-Sc0000003-1570713199:5069409..5069524 | Branchiostoma lanceolatum | exon |
| Blg01080.0-exon-Sc0000003-1570713199:5070305..5070434 | Blg01080.0-exon-Sc0000003-1570713199:5070305..5070434 | Branchiostoma lanceolatum | exon |
| Blg01080.0-exon-Sc0000003-1570713199:5071090..5071630 | Blg01080.0-exon-Sc0000003-1570713199:5071090..5071630 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5068333..5071630 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01080 |
|
