TCONS_00051916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051916
Unique NameTCONS_00051916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1664

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051916 ID=TCONS_00051916|Name=TCONS_00051916|organism=Clytia hemisphaerica|type=transcript|length=1664bp
CTTGTATAAAACGGGATCTGACCTTGTGCATCGCTTCACAAGGCTTTGTC
GTGTTTACCTATCAACGTAAAcaacaattatttttttatagataTATAAT
ATCTTCTCTTGGATTTGTCGCTTATCATTTTACGCTTAACACTCAAAATG
AGAACAagtatttttatcttttgtctCCTATTTGGAGtaatCTTTGCCAA
GTCATGCTTGGACGAGGTTAAAGAATTGGAAGCTAAACCACCTATGGTTG
GCGCTTACAAACCCATCTGCCAAACCAATGGTCTTTATGCTGAAACACAA
TACCACGCTAGTTACTATTTCTGTGTCAACCCGAAAACTGGTGAAAAGAT
CTTGGGAACCGATGTTCGTTTCCGAAAACCGTCATCATGCAAAACCACAC
caTGTATGTTACAACGTCACCAGGGTATGTTGAACTCCAAGCAAGGAATG
GTCGGTCATTTTACACCACAATGTGAAGAAGACGGTTCTTTCAAGAAAGT
TCAATGTCATGGTTCAACTGGATACTGTTTCTGTGTTGCTGCAGACACTG
GTGTCAAAGTGGAAGGGACTGAAGTTCGTGGTAAACCAACAAACTGTGAA
ACTGCAGACAACGCCGACAAGCCATGTCTCAAACAATTGAACGAATTACA
AGCTAAGCAACCACTTCTTGGACAATTCAAACCCAAATGTCAAGCTAATG
GAATGTTTGCTGAAATGCAATCACACGcGGGTTATCACTACTGTGTTTTC
CCTAAAACTGGCGAAGAAATCAAAGGAACTCGAATTAGGTTTGCACAACC
TAAAACATGTAAAGCTACACCCTGTTTGATCCAGCGTCATCATGCCATGA
AAGATTCAGATCGTGGAATGGTTGGCCAATTTACACCACAATGTGAAACT
GATGGCTCCTTCACTGTCACTCAATGTCATTCATCCACTGGGTTTTGCTT
CTGCGTTGTCCCAGAAACTGGTGAAAAGTTATTGGGCACTGAATTGAGAT
TCAAGAAACCGAAGAACTGTGAAATGACAGAATGTATGCACGAGCGTCAC
CAAGCATTGAAATCAGGACTCCTTGGTATCTTCAAACCAGCTTGTGATGA
AGATGGTCTCTACTCAAATGTCCAATGCACTGAGGGTATCTGTTATTGTG
TTTTCGCAAAAACTGGAGCTAAAGTTCTTGGAACAGAATTAGAAAGAGGT
GTCCGACCAACTACCTGTGAATTGACAAAATGCTTCAAGAAGCGCCATGA
GTTTTTGAGTCAAACACAACCATTACTTGGTGCAAGAAAACCAGTTTGTA
CTGCTGACGGAAATTTCAACCCTGTTCAATGTCATGAGGGAGTTTGTCAT
TGCGTTTTCCCAACGACTGGTGAAGAAGTCTTGGGAACAATGACTCGTTT
CAGAAAACCCCAATCCTGTAAACTAACTCGTaagtaggctacgtcatatc
ttccttcgtttcgagcgtaaaactcctgcTCTTCGGGGTacgagcactgc
tcttgttttgaatattgaaattctccggataCATCACATgagcactgagg
ttttaatgaaacaatagagagtttcgaaacttAAGCCAATCAGaggtgtt
ttaaacattcttttatttgaaatctctattgataaacatcttttgtgaaa
attgtctattatgt
Run BLAST on NCBI

transcript from alignment at scaffold_206:190695..202027-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051916 ID=TCONS_00051916|Name=TCONS_00051916|organism=Clytia hemisphaerica|type=transcript|length=11333bp|location=Sequence derived from alignment at scaffold_206:190695..202027- (Clytia hemisphaerica)
CTTGTATAAAACGGGATCTGACCTTGTGCATCGCTTCACAAGGCTTTGTC
GTGTTTACCTATCAACGTAAACAACAATTATTTTTTTATAGATATATAAT
ATCTTCTCTTGGATTTGTCGCTTATCATTTTACGCTTAACACTCAAAATG
AGAACAAGTATTTTTATCTTTTGTCTCCTATTTGGAGGTAAGTTAATACT
TTTGTTCATTCGTTATTTAGTTTTCCTTTGGTTTTCTTTCCTTTGGATCA
CTCGAATCTCAGCTCGAATATGTATCACTTTTACGCGAACATTTTGTTTT
TGTTTTTTAATTTAGGCGAGAACTTGTTTTGGCGTGGCAGTAACTGATTT
AATTTTGGCGAGAACTAATTCGCTGGCACTAGTTACCTTCGAATAGTGGG
GAAATTTGTTTAACTCGAAATACACATATACAAGGAATTATAGTTTCAGT
TTGATGTGGGATAATTTTGGTTTGACATCTGTTGACATGGCTTACTTAGA
AATTGAATGACTTGCTTTTTTATTTTCAGTAATCTTTGCCAAGTCATGCT
TGGACGAGGTTAAAGAATTGGAAGCTAAACCACCTATGGTTGGCGCTTAC
AAACCCATCTGCCAAACCAATGGTCTTTATGCTGAAACACAATACCACGG
TAAGTCCTAAGATCGTGTTGGATGATCTGGTCTTGGATTGAATAATTGTC
TGTTACATTTTTGTATTAATTTTTACTACACTTACTTAAAACAAAACGGT
GACTTTGAGGTCAAAACAGTACACATATCTTTCTTTTTTAGAACCAAAAG
ATACACGTTATTTTATAAGAACAATCTGTATAAAAACATAAGACTTCGGT
GGCCAAAATGTTAACCCAAATTTATCTGGTCCCTGGTGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGGGGGTTAAAAA
TCAAAATGTCCAGGGGTAATGCATGAAAAAAATAATATATCCTCCACCCC
CCATGAACGGATTTTTTCTGGAAGAGCCCATTTCTGGTCGATGTTTAGAA
ACTCCCATATTTTTATTTTGTCCAGTTATGTTTTATGTGTTTCATTGTTT
CAATGTTCATTGATTAGTTTTGATAATCAGGTAGGTCCATAAAAGTATGA
CTTGTTTTATTTCCGCTTCAAGCGATAACTTCGTTTTTTATTTCAGCTAG
TTACTATTTCTGTGTCAACCCGAAAACTGGTGAAAAGATCTTGGGAACCG
ATGTTCGTTTCCGAAAACCGTCATCATGCAAAACCACACGTAAGAATGCT
ATTTCTTCATATAGAAAGAAGAAAGAGCTATAGCCTGGAGATTCATGCTA
TTACTTCTTCTTTTTATATACTGATGTTGACATGAAATAGCATGGTTCGG
GTTAAGAGTTTGAATTTCCCAGATTCTAATGACGGTTGAAAACACAACCA
ATCAAATTTTGTTATTCTGTCACTGGTCACATTTTCTTAGAGAAAACGCA
AGTTCCGAAATTTGGTTTTAATTTCAGTAAGCGAGGACAGTGCTAAATTC
GAATATCCCACTGTAAATTTTTTGAGGTAGAAATCTGCCTCACAGCTCAA
ACCCGTCCTGTATATATCAGATTATAAAAATCTCCTGTCTAGAATAGCTA
GAGAAGAAGGAATCCACTATTCGTTATTAACCAAGTTTTTGTTTTTGCAC
TTTTGAGGACAGCGGAATTATTCAATCAATTTGGAATAACCCGCAATTTT
GACAACACAAACTCGCTATTATTTGAAATTTACCGGATATCATAATTCAA
AATTAATAATTGTTCTAATGTTGTTCAAATTATTTTCAGCATGTATGTTA
CAACGTCACCAGGGTATGTTGAACTCCAAGCAAGGAATGGTCGGTCATTT
TACACCACAATGTGAAGAAGACGGTTCTTTCAAGAAAGTTCAATGTCATG
GTATGTTGTAATTTAATCCAATCGAAATCTAAAATCCAATTCAAATTTCA
CCAATATCTAAGATTAGAGAAATGATTTATGTTTTTTTACCAGTGGTTAA
TTTGAATTTTCTAATGAAAAGATTTTACGTGTGAACATCCAATTGGGTCG
ACTTCTGAGATGGACTAGGGTTTTGCATGATGCAGATAGACTTCTTTTGG
CTTCTAGGCCGAAAATCATACAATGCTTATTAAACCTTAGAAATTTTCAT
TAATGACCTGTTTTCTTTATTTATGTAATACTCTCGGGTACCTAATAGCC
GCTCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCTCCGCTTATTCCAATCCCC
CCGGCTATTAGGTACCCGAGAGTATTTACATATACTTTTGAGATATGAAA
AAAAATAATTATTTTTCTTATACAGCTTCCACTGGCTTTTGTTATTGTGT
TGTACCTGAAACTGGAGCTAAAGTCGTCGGAACTGAAGTCCGTGGAAAGC
TAACCAACTGTGAAGCTACAGGTTAATTTCAACTTTATGTATTCTTATCA
TTGTTCACCCTATCTTAAAAAGCCTGTTAACCGAAAAAAACCTTTTTCCT
ATATGCCTGATTGTTTACTCAAATTACTTTATATGTATTTTTTAGGTGTC
AATAACGCCAAGACTTGCTTGAATCATTTGCAAGAATTAGATGCCAAACC
AGCATTGTTGGGAGCTTTCCGACCAGTCTGTCAAGCTAATGGACTTTACG
CTGAAACTCAATGTCATGGTATATACCATTGCATAATTTTGTTTGAATTT
TAAAGCCTCTCAACAACATTTTACAGAGAGGAGGATTTCAATCTTTCATT
AATTATCAGATCAAACAGACCTTTTAGGACTGAATAAAGTCCGTTTTATG
TATTATTTATTGAGGAGCATCGGCCGAGTAGTCAAGGTGTCAGCATCTCA
AACCAGGGGTTTGTGATTTGAAGCCCCCCCTCATTCTAATGTTTCGTTAG
GTCTTTTGATAGCCCTGGGGGGGGGGGTACTAGGGTTAGAGGATGAGGGG
TATGTGCGGATGGGACCTATTAAAACCGACCCTTAGAGAGACTGATTTTT
GCTGAAAAGGTGACCCTTAGAGAGACTTTCTTGAAAAGTTTTCTTTGATT
TTTGAAAATTTTTTACCCTTATTTTTCACTCTAAATAAAAAAAAAATCCT
AAAAATCGTTTTCCGACCCTTAGAGAGACTAATTTAAATTTTTCTGATTT
TTGCAACTCTTAAAGAGATTTTGTAAGATGAAAAACCGACCCCTACCGTC
TGCACATACCCAGCACCTATTTTTGCCTAATAACCCCCCTCCTCTGATAA
ACAGCAGAGTCGACTGGCTGTGGATCCAGTGAAATCAATCAAAAGGGAAA
ACGAACGAAAGTAAAAACAATTGAACGATTTCTAAAAGCCCTACATTACT
GGGCTATCCACGTAAAATATCGGATCAGTAATCATATTCGTCAACAATTT
TGTTTTTTTGTGTTTGTAGGCTCCACAGGGTTTTGCTTCTGTGTTGTACC
AGAAACTGGCAAAAAGATTTTGGGAACTGAAATTCGTGGAAAACCANTAG
GTTCCACAGGGTTTTGCTTCTGTGTTGTACCAGAAACTGGCAAAAAGATT
TTGGGAACTGAAATTCGTGGAAAACCAAAATCATGCAAAGCTACACGTGA
GATGCGCTTCAATCTATTTTTCCTTGTTTAATAGTTGTGTTCTAAAGATT
CTTAGACACGAAAGTTTCATTTTATTATCATATTGTAAGGTTAACAATCC
GTAATTCATAGGGCTAAACCTGCTTGAGATTGAGGCTTTACCCCTGAGTT
GTTTGAAAATAAAAGACAAATCAAGTAAAAGAAATAATTTGAAAACTTAC
TGTATACCGTATTTTCTCTGTTCAGCACCACTTTCTTTAGAGGCCTGAAA
TTTACATCTCGTAAATGACATCTCGAAAATGGAGGAAATTCATTCACATT
TTTACGTTTGCAGACTAGAAAGTATAATTTATGACTAATTAGTTTTTGTT
TTAACTTTCCAGCCTGTTTATTGGCACGTCACGAAGGATTATCGAAATCA
CAAAAAATGATGGTGGGTCATTTCACACCACAATGTGAAGAAGATGGTTC
TTTCAAGAAAGTTCAATGTCACGGTATGTTGTNACACCACAATGTGAAGA
AGATGGTTCTTTCAAGAAAGTCCAATGTCATGGTATGTTGTTATTGTCAT
TCTGGTTGCTAATGATGAGCTATCCCGTAGGGGGCGCACTCGGTCTAAAA
ACATTCGGGTCTTGAAATTGGACCCTGGCAGTACAAAGAAGATTTAACCA
AATTTGACCTTTACGGTGTATTTCCTTGAAAGAATTTCGTCCATTTTTAA
AGAAATAATAGTCAGATTTTCCAATGTTCTGGCCAAGCATCTTCGTTTTT
CTTTAATCTTTAAACCCTTTTAGTGCAATTTTTCTAATTACGACCCTAAA
CTTTAGGAGTCTTGAAATAACACACCCTTACAATTTTCTTATACAGCTTC
CACTGGCTTTTGTTATTGTGTTGTACCTGAAACTGGAGCTAAAGTCGTCG
GAACTGAAGTCCGTGGAAAGCCAACCAACTGTGAAGCTACAGGTTGATTT
CAATTATATATCTTCTTTTTATTTATCTTATCTTAAAAAAGCCTGTTAAC
CGAAAAAACTTATTTTATTTTGCCTGATTATTTACTCAAATTACTTTACA
TGTACTTTTAGGTGTCAATAACGCCAAGACATGCTTGAAACATTTGCAAG
AATTAGATGCCAAACCAGCATTGTTGGGAGCTTTCCGACCAGTCTGTCAA
GCTAATGGACTTTACGCTGAAACACAATGTCATGGTAAATACCATTGCGT
AATTTTGTTTGAATTCAAACGTTTATGATAAAATTAAAGCCTCTCAACAA
CAGTTTACAGGGAGGAGGATTTTATCATTCATTATCAGATCAAGCAGATC
TTTGACGAATGAATAAAGTCTGTTTTATGTATGATTTATTGAGGAGCATT
GGCCGAGTAGTCAACCGTCGTCAGCTCCTCAAACCAGGGGTTCGCGGTTT
GATTTGAATCCCATCTCCTTCCAATGTTCCGTTCTGTTTTTAGATAACAG
AGCCGGTTGGCCATGGGCCCATTGAAAATAATCGAATGACTTTCTAAATG
TCCTAATTACTGAGCTATCCACGTAAAATATTAACTATTGGATTAATAAT
CATTTTCCTGAAAAAATATTTTTTATTCTTTAGGTTCCACAGGATTTTGC
TTCTGTGTTGTACCAGAAACTGGCAAAAAGATTTTGGGAACTGAAATTCG
TGGAAAACCAAAATCATGCAGAGCTACACGTGAGATACGCTATTCTTCTT
AATAGTTTAATTCTAGAGATTCTTAGATACGGAAGTTTCATTTTATTATC
ATATTGTAAGTTTACAATCCGTAATTTATTTGGCTAAATCCGCTTGAGAT
TGAGGCTTTACCCCTGAGTTGATTAAAGACCAAATGGACATGTAAACATA
ATTCGAGACGAACACTTATACCTTATCTTCCCAATTTTCTCACCGCTTTC
TCTAGAGACCTGAAATTCACATCTCAAAAATTGAGGAAATTTATTCAATT
ATCTACGTTTGCAGGGAAAAAATTACGATTTTAATACCGAAAAAAATACT
GCCTCTTCTTTTTTGCAGCCTGTATGTTACAACGTCACCAGGGTATGTTG
AAATCACAAAAAATGATGGTCGGTCATTTTACACCACAATGTGAAGAAGA
TGGTTCCTTCAAGAAAGTTCAATGTCATGGTATGTTGTATTTCTAAGGAG
TTTTAATCCTTTTTCTTTTTTTAAAGATTGGGAAAATGGAAAAATCTTTT
AATAGGGCCTTGGAAAGGTTTTCCCTTTCATCAGCACCAAGGCTTAAAAG
CTACAGAAATCACCTCCTAAAATATCAACTTTGATCTTTGAAAAAGTATA
AAATTTAATAGTTGTATTGCGGTCTGGTCAAATCTTGCTTCCTTTTTCTG
TTAGCTCTTACTTGATCATACCAGATACTAGGCCCTATTTCGTTGTTAAG
ACAATTTTTTCATTTCGCCAAAGGTTCAACTGGATACTGTTTCTGTGTTG
CTGCAGACACTGGTGTCAAAGTGGAAGGGACTGAAGTTCGTGGTAAACCA
ACAAACTGTGAAACTGCAGGTACTTACTGTTGCAGATAGTTCTCGGACGA
GTTAAGGACCTTAAGAGTCCGAGTTAAGAGATTCGAATTATAGATACTAT
TTAAAGAGGGTTTCTCTTTAAAGAGGACTAGGAATAAGTTTGAATGCGAG
AGACTACTATGGGTATTAAATAGTAGAATTTTTTTAATTGATATCAATCC
TATGAAATTTATTTGGCATTTTGTTTTTCAATCTTCTTGGCACAGACAAC
GCCGACAAGCCATGTCTCAAACAATTGAACGAATTACAAGCTAAGCAACC
ACTTCTTGGACAATTCAAACCCAAATGTCAAGCTAATGGAATGTTTGCTG
AAATGCAATCACACGGTAAGAGGTCACATCTGATCCCAAATATCCTTTCT
CCGGTTTTTGATTCAATCCGAAGTTCACAACACGTTGTCTTATCGTTTTC
AATTTCTTTATTAAAAGTCAAACAATCAAGTGTGGAAAACTGTTATACTT
TGAGGAAAAGGTCCTCCGTTTAAAAAAGAGACAGCCAAGTCAATAGCATT
TCAGGTGGTTTTCTTATGTTTCTACACTTTTTTTCTTTAAGCGGGTTATC
ACTACTGTGTTTTCCCTAAAACTGGCGAAGAAATCAAAGGAACTCGAATT
AGGTTTGCACAACCTAAAACATGTAAAGCTACACGTAAGTAACCAAGTTA
AAACGTTTAATTTCTCGTCGACTGAATTCCCAGCTCGTTGACACTTGACC
AAATAAATCCTTCTGCTTTCTAACTGTATGAGATACCTATTACATACCTG
TGATAAAGTTTATCTGTATGGAAATATTTCCTTTCCTATCACTCACCTTA
TGATTGAACGTTTTCAACAATATCTAATTTCCCAGCATAAACTAATGAAA
TCAACTATACTTTCTTTATAAATACAATCAATTTAAGGGACTGTCGCTAA
TAGCCCAGTTCATCCACTAATAAGTGTTATAATAAGTGTACTTTAATTCT
TTTTTGCAGCCTGTTTGATCCAGCGTCATCATGCCATGAAAGATTCAGAT
CGTGGAATGGTTGGCCAATTTACACCACAATGTGAAACTGATGGCTCCTT
CACTGTCACTCAATGTCATTGTAAGCTTGCAAAAATACCTTGTTATTTTA
TAGTCAACTTATCATCCTCCGCTTTGTCAAATGACAGGAAAACATAAACT
TGCTAAGTACAGAATTTGAAATTTTCATAGATGAAAAAGTGAAAAGGTCA
TATAGCGCTGTTTAAAATGATGAATTTCGACCTTGTTTTTATAGCATCCA
CTGGGTTTTGCTTCTGCGTTGTCCCAGAAACTGGTGAAAAGTTATTGGGC
ACTGAATTGAGATTCAAGAAACCGAAGAACTGTGAAATGACAGGTAACGA
TCAATTTCCGTGTCTTTTTGAATATGTTTCATTCTATGTATGGTCATTTA
ATGTGATCTAATCAAGTACCCCCTAGTGCTAGCGCCGGACAATATATCCC
CCTCCCAGGGTTTTATAGAAGGACCAAACCTTGACTTGACAGTATATATT
ATATACATATTAAGAACAGTCACACATTTACCAGTTAATTTACCACAATA
ACACCAGTAGCGTGGTGGGTCGACTAAAATTCGGGCAAACTGGAGGGGCA
GTTTTAGAAGATTTTGATTTTGGCGCCCCCTATTAAAATGAAAATTTTCT
CTCTTTTATACCGAAAACAGTCATATCTAAGGTGTAAAAGAGCAAAGGGG
CGTCGAAATTAGTAATCAGAGGCGCCATGTTACAGATCGTAATACGACTC
TTTAATTTCTTAGAATGTATGCACGAGCGTCACCAAGCATTGAAATCAGG
ACTCCTTGGTATCTTCAAACCAGCTTGTGATGAAGATGGTCTCTACTCAA
ATGTCCAATGCACTGGTAAGATTTTAAAGGAAGTCTAATTAGAATTAAGC
GAAGTATCGGCATTTTTAAGAAAACACCTATAAATCCAACTAAAGTGACT
TTTTCATCCCACCCAATTAGACGATTCCTTGTTTTTTTAATGCCTTTTAA
CGATTACTCTTATTTTCACTACCTTATTATTAGTTGGAAATGAGAAATGA
GAAATAATAATGAGTTAGCACACAGTTGAATCTGAATCACTGTGAAAATA
CTGATTTTGAAACCTCGATAATTAAACTTTTTTATTGTTTTCTTTACAGA
GGGTATCTGTTATTGTGTTTTCGCAAAAACTGGAGCTAAAGTTCTTGGAA
CAGAATTAGAAAGAGGTGTCCGACCAACTACCTGTGAATTGACAAGTAAG
ATGTCTTTGCTATGAAGTTTATTAGACCTTTTAGGCCCCGTTAAGTTGGT
ATGGTTCAGTGTATACTGTGAGATGACAGATGGAAAAGAAACTAAAAAAG
TATCTGTTGTTGTTACCGAAGCCATTTATCCATAGTTACTACCCAAGCCA
TCCATACAAAGTCTTCTAATGGATTAAACGTGATATGTTTAAAACACCCC
TGTGTCACAGACCCGCTGGAACCCCAGCCCCGCTAGAAAATTTGGCCAAA
TTTTCGTCCCCTGTACTAAAAATACCCCAAAATTTCAGCCCACTGGGAAA
TTGACTTTGTTTACATCGCCATTGAAATTTCATTATAAAAAATTGGACTC
CAAAACCACCCCAACTGGATTTTTTAAACTTGGTACAATAGAATCTCTAT
CCCCATCGGGATTACGATCAAGAATTTTACTCCCGCTGTGGGAAAAAGTT
TAAACCGGGGCTGTGAGACAGGGGTGTTTTGTTTTAAAAGTATGACGTTT
CCGTTTTAGAATGCTTCAAGAAGCGCCATGAGTTTTTGAGTCAAACACAA
CCATTACTTGGTGCAAGAAAACCAGTTTGTACTGCTGACGGAAATTTCAA
CCCTGTTCAATGTCATGGTAAGTTAATATCCAGGCTTAATTGACTCTAAT
GAATAGAAAGCCTTGAGCTTCCAGAACTTTTGTTGGATCGTGATTGATGT
GATTGAGAACATGTTCAGAAGTCACGGTTTCGTATCGCTCCGGTGTGGTA
TTTGTTACGGATAGGAAGTGTTCATATTCATTTCGGAACGTTTCGGAGCA
AGAAAACGGAGCAGTAACGTTCCAATGAAAGTAGTGGAGCGAAACTGTTT
CGATCTGTTTTGCTGTGTAACGTCTTCTTTTTGACGTTTCGAATTTTGAC
GTTCACACAGTGTTTTCGGAGCGAAACGGAACTTAGCATGTGAACGTGGT
CTGAGAGTACCCGAAACGATGATTTTGAAGGGATATTACACAATATCTGA
TATTATTTGTTGCTATTTGTGTAACCCACTGCTCCATTTCTTCTCGTTGT
TATAGAGGGAGTTTGTCATTGCGTTTTCCCAACGACTGGTGAAGAAGTCT
TGGGAACAATGACTCGTTTCAGAAAACCCCAATCCTGTAAACTAACTCGT
AAGTAGGCTACGTCATATCTTCCTTCGTTTCGAGCGTAAAACTCCTGCTC
TTCGGGGTACGAGCACTGCTCTTGTTTTGAATATTGAAATTCTCCGGATA
CATCACATGAGCACTGAGGTTTTAATGAAACAATAGAGAGTTTCGAAACT
TAAGCCAATCAGAGGTGTTTTAAACATTCTTTTATTTGAAATCTCTATTG
ATAAACATCTTTTGTGAAAATTGTCTATTATGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032858XLOC_032858Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051916-exon-scaffold_206-1575043694:201841..202027TCONS_00051916-exon-scaffold_206-1575043694:201841..202027Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:201379..201498TCONS_00051916-exon-scaffold_206-1575043694:201379..201498Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:200639..200731TCONS_00051916-exon-scaffold_206-1575043694:200639..200731Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:199978..200088TCONS_00051916-exon-scaffold_206-1575043694:199978..200088Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:194359..194454TCONS_00051916-exon-scaffold_206-1575043694:194359..194454Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:194013..194132TCONS_00051916-exon-scaffold_206-1575043694:194013..194132Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:193694..193786TCONS_00051916-exon-scaffold_206-1575043694:193694..193786Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:193258..193368TCONS_00051916-exon-scaffold_206-1575043694:193258..193368Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:192985..193083TCONS_00051916-exon-scaffold_206-1575043694:192985..193083Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:192463..192564TCONS_00051916-exon-scaffold_206-1575043694:192463..192564Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:192083..192178TCONS_00051916-exon-scaffold_206-1575043694:192083..192178Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:191461..191568TCONS_00051916-exon-scaffold_206-1575043694:191461..191568Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1575043694:190695..191022TCONS_00051916-exon-scaffold_206-1575043694:190695..191022Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:201841..202027TCONS_00051916-exon-scaffold_206-1510915933:201841..202027Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:201379..201498TCONS_00051916-exon-scaffold_206-1510915933:201379..201498Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:200639..200731TCONS_00051916-exon-scaffold_206-1510915933:200639..200731Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:199978..200088TCONS_00051916-exon-scaffold_206-1510915933:199978..200088Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:194359..194454TCONS_00051916-exon-scaffold_206-1510915933:194359..194454Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:194013..194132TCONS_00051916-exon-scaffold_206-1510915933:194013..194132Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:193694..193786TCONS_00051916-exon-scaffold_206-1510915933:193694..193786Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:193258..193368TCONS_00051916-exon-scaffold_206-1510915933:193258..193368Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:192985..193083TCONS_00051916-exon-scaffold_206-1510915933:192985..193083Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:192463..192564TCONS_00051916-exon-scaffold_206-1510915933:192463..192564Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:192083..192178TCONS_00051916-exon-scaffold_206-1510915933:192083..192178Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:191461..191568TCONS_00051916-exon-scaffold_206-1510915933:191461..191568Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1510915933:190695..191022TCONS_00051916-exon-scaffold_206-1510915933:190695..191022Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:201841..202027TCONS_00051916-exon-scaffold_206-1491911889:201841..202027Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:201379..201498TCONS_00051916-exon-scaffold_206-1491911889:201379..201498Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:200639..200731TCONS_00051916-exon-scaffold_206-1491911889:200639..200731Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:199978..200088TCONS_00051916-exon-scaffold_206-1491911889:199978..200088Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:194359..194454TCONS_00051916-exon-scaffold_206-1491911889:194359..194454Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:194013..194132TCONS_00051916-exon-scaffold_206-1491911889:194013..194132Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:193694..193786TCONS_00051916-exon-scaffold_206-1491911889:193694..193786Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:193258..193368TCONS_00051916-exon-scaffold_206-1491911889:193258..193368Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:192985..193083TCONS_00051916-exon-scaffold_206-1491911889:192985..193083Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:192463..192564TCONS_00051916-exon-scaffold_206-1491911889:192463..192564Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:192083..192178TCONS_00051916-exon-scaffold_206-1491911889:192083..192178Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:191461..191568TCONS_00051916-exon-scaffold_206-1491911889:191461..191568Clytia hemisphaericaexon
TCONS_00051916-exon-scaffold_206-1491911889:190695..191022TCONS_00051916-exon-scaffold_206-1491911889:190695..191022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:190695..202027 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.327154	0.169068	0.482359	0.531077	0.342363	0.470928	3.58666	5.55308	27.5113	13.2461	55.5254	78.316	395.109	465.692	572.731	853.272	97.9326	106.396	216.006	208.69	35.6914	26.362	23.407	21.5893	16.3835	12.9877	4.34183	7.6778	78.7892	69.373
Blast
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BLAST of TCONS_00051916 vs. Swiss-Prot (Human)
Match: SMOC2 (SPARC-related modular calcium-binding protein 2 OS=Homo sapiens GN=SMOC2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.208e-16
Identity = 70/266 (26.32%), Postives = 123/266 (46.24%), Query Frame = 1 
Query:  259 KPICQTNGLYAETQYHASYYFCVNPKTGEKILGTDVRFRKPSSCK-TTPCMLQRHQGMLNSKQGMVGHFTPQCEEDGSFKKVQCHGSTGYCFCVAADTGVKVEGTEVRGKPTNCETADNADKPCLKQLNELQ-AKQPLLGQFKPKCQANGMFAEMQSHAGYHYCVFPKTGEEIKGTRIRFAQPKTCK--ATPCLIQRHHAMKDSDRGMVGQFT-PQCETDGSFTVTQCHSSTGFCFCVVPETGEKLLGTELRFKKPKNCEMTECMH 1041
            KP+C ++G    ++       C +P+        ++ +R   +CK  + C+ +R      +++     F P+C +DG++ +VQCH  TGYC+CV  + G  + GT V  K   C  + N   P  +   +   A  P L     + Q  G   ++ S        +P    E    +++  Q KT K   + C  +   A++++ +        P+C   G +   QCH STG+C+CV+ +TG  + GT  R+++PK C+ T   H
Sbjct:   50 KPLCASDGRTFLSRCEFQRAKCKDPQL-------EIAYR--GNCKDVSRCVAERKYTQEQARKEFQQVFIPECNDDGTYSQVQCHSYTGYCWCVTPN-GRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTDDAAAPAL-----ETQPQGDEEDIASR-------YPTLWTE----QVKSRQNKTNKNSVSSCDQEHQSALEEAKQPKNDNVVIPECAHGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQPK-CDNTARAH 288
The following BLAST results are available for this feature:
BLAST of TCONS_00051916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SMOC22.208e-1626.32SPARC-related modular calcium-binding protein 2 OS... [more]
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