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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051832 ID=TCONS_00051832|Name=TCONS_00051832|organism=Clytia hemisphaerica|type=transcript|length=1769bp
TACTGTGAAGGTCATTCGTATTTTGATGTCAGTTTGTGTTCAAGAAAATC
TTAAGAGGTCCTTTACCATGaagaaattgactttgtttttagTTTTGGTC
TTTGCTGCTACCAGATTTGGTTGCATTGACGCTTGTTCTTGTTTTCCGTC
GCAtcctcaagaattattttgtaaCTCTGAATTCGTAATCAAAGCTCTGA
TAACGTCATCTGGTCGAAATGTAACGAAAGATATTTTCTCGTATCGTTCT
TACTCCCTAACCATCTTGGAAGTGTTCGGCGGTCACCAAGCACTACGTCA
TCTTTTCATCAGTAAACAAGAAGCGACAAATGTTGAGAGCAATGACATTG
ACACTTTTGAAGATTTGGAGTTTGTTGAAGCGAACATAACCACACCGTTG
TCCGAAAATTTGTGCGGTGTTCATTTGAATGTGTCCGAATCGTATCTCAT
TTTTGGACAAATCCGCAATAATGAACTGCAAGTGAATTTGTGTAATTATA
TTTCATATTGGGAAGCAGTGAGCAGCCAAGTGAAGTCTGGAATTTTTGGT
GATTATGATTGTCGCTGTAAAATCCGGACCCGAATGAGCCCAGAACAACC
CGTTGAGAGTAATGAAATCCCCAACGAAGGAACATTGAGGTCGAGTTCCA
CGTGTTTTTGGGAGATGTATCCGGATGAGCCTGTGGATGAATGTGCGTTG
AATTTCTTATCATGTCGTAAATTGGTTCACCCAATGGAAATCAATGATGA
AGAAGAACAGTGTGTTTGGGTGGAAGGGCGTGATTATGAATTGTGCCAAA
TTGCTGCAGAATCTAAACGAAGTGAAATAAGGGCGGCGTTGAAGGCTGAA
GATTTAATGGAAAATGAAGAGAGTGCAGATAACGCCAAACAGGGTGTGGA
AATGATGNTGAAGATTTAATGGAAAATGAAGGGAGTGCAGATAACGCCAA
ACAGGGTGTGGAAATgatgaaaaaggaagaaaaatcaaTGAAAGCCTCTT
CAAGTCaggaaaatcctgaaaaatcaaCGCTATCGAATGCAAAGAAATCG
GCTTGATAAATCGCTGGTCAATCATCTAAAAAGATGTCACCAAACAAACA
GCGTAATAAATGAATATAATAATTGAAATCTTCATGTTCATAGTATGCTT
TGTAATTTGAAGATGTTATTTTAAATGATTTGGCTTTATGGTGAGATTTT
TATCTAGTAATGATTGTAGGATAATGATCAAATTTGTGGAACTTCacaac
acgcttttttataagaagatgaACGTTCTTAATAAGGGTTTTAAATCTGT
TGAAATCCAGTAGTTTTTAGTAATTcttgaaatctgaggctcagattgtt
cttaatttgtttttaggTCTTAGGTTTTAGGCAAATTTTCGGCctcgtgt
tcttttaaaattgttcttataaaaaacgtatatatTTAGATATCTTTATT
GTTCAGCAAGAAATATTCCAGACAGTAGAAAACCAAAACCAATTTAATAA
ATTTTAtactcgttgaaaagataattcagggcaccataatttttaaaaat
caagatGGTGTGATCCTGCTATACACTAAGGCTACGGCGTATCTCCCTTT
GTTATGAGCGTAAGACTCCAGAGTAATCCAGAATAAAGCCTTAAgactgg
agctgtctattgtgtagattAGACTTTAGCTATATATATAATCATTTTTA
GAATACACGTATTTCTATATTTATAAGAATTAACTATATAAAACTATATA
GAAGCATCAGTCAGCAAAA Run BLAST on NCBI protein sequence of TCONS_00051832-protein >TCONS_00051832-protein ID=TCONS_00051832-protein|Name=TCONS_00051832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
TVKVIRILMSVCVQENLKRSFTMKKLTLFLVLVFAATRFGCIDACSCFPS
HPQELFCNSEFVIKALITSSGRNVTKDIFSYRSYSLTILEVFGGHQALRH
LFISKQEATNVESNDIDTFEDLEFVEANITTPLSENLCGVHLNVSESYLI
FGQIRNNELQVNLCNYISYWEAVSSQVKSGIFGDYDCRCKIRTRMSPEQP
VESNEIPNEGTLRSSSTCFWEMYPDEPVDECALNFLSCRKLVHPMEINDE
EEQCVWVEGRDYELCQIAAESKRSEIRAALKAEDLMENEESADNAKQGVE
MMXKI Run BLAST on NCBI transcript from alignment at scaffold_205:341115..343900+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051832 ID=TCONS_00051832|Name=TCONS_00051832|organism=Clytia hemisphaerica|type=transcript|length=2786bp|location=Sequence derived from alignment at scaffold_205:341115..343900+ (Clytia hemisphaerica)
TACTGTGAAGGTCATTCGTATTTTGATGTCAGTTTGTGTTCAAGAAAATC
TTAAGAGGTCCTTTACCATGaagaaattgactttgtttttagTTTTGGTC
TTTGCTGCTACCAGATTTGGTTGCATTGACGCTTGTTCTTGTTTTCCGTC
GCAtcctcaagaattattttgtaaCTCTGAATTCGGTaattatttttgca
aatttatctttttacgagtcatttaaattaattttataTACACTCTTAGA
TACCTTATGAACGGGGCGGGGGCGGGGAGTcttcgaattttttttgataa
ctgATTATGTTTTCAAAAACTACTAAATATGGCTATGGGACACGCCTGAA
TAAGCTGGGTGGCTGAAAAATAAGCCTAATTTACAAGCAGGAACCGTTTC
TGAAGCATCTGATGCCCTATGAAGTAGTGGATTTAATTAGTCTGAAATct
cagaattgcattaatttttctgcctcagttccagtccctaaaccataaca
aactatatatttttggaagcatatttggatgtagaatactgtattcggtg
taacttaatttttttctcagcagaatttgagtttttttacgaaaacgtga
ttatgacgtcattatttatgacgtcataactttAAAGAGTTGAATATCTC
TAGAACTAATACTcgaaactttatgaaatttcgaccaatgatagaactca
tcaagaggaggagaattgttttcaaaatatttgaaaatttgctgatgtca
ttattttatcgcaaaaattcgaattcttgcaatttctgctgacgtcatta
aaattgggaaatacttttaaaattgtactttatcactgggtccaaatttc
aaaaagtttggatttatatttctcgatatattcaactttttatatttatg
acgtcatcaataatgacgtcataaacaggttttcttaagatatctctaat
tatactgagaaaaaatttgagttacaccgaatacggtattctacatccaa
atacgctcccaaaaatatatagtttgttatggtttagggactggaaatGG
GGCGGAAagattaatgcaattctgggacatacATTAAGTTACACGAGATA
ACGAAAGTGACTagttaaattagagaaattacgttatttatcattttgat
tttttcaatataaatccctaatcttaaaaattatttaatgttttgtttac
AGTAATCAAAGCTCTGATAACGTCATCTGGTCGAAATGTAACGAAAGATA
TTTTCTCGTATCGTTCTTACTCCCTAACCATCTTGGAAGTGTTCGGCGGT
CACCAAGCACTACGTCATCTTTTCATCAGTAAACAAGAAGCGACAAATGT
TGAGAGCAATGACATTGACACTTTTGAAGATTTGGAGTTTGTTGAAGCGA
ACATAACCACACCGTTGTCCGAAAATTTGTGCGGTGTTCATTTGAATGTG
TCCGAATCGTATCTCATTTTTGGACAAATCCGCAATAATGAACTGCAAGT
GAATTTGTGTAATTATATTTCATATTGGGAAGCAGTGAGCAGCCAAGTGA
AGTCTGGAATTTTTGGTGATTATGATTGTCGCTGTAAAATCCGGACCCGA
ATGAGCCCAGAACAACCCGTTGAGAGTAATGAAATCCCCAACGAAGGAAC
ATTGAGGTCGAGTTCCACGTGTTTTTGGGAGATGTATCCGGATGAGCCTG
TGGATGAATGTGCGTTGAATTTCTTATCATGTCGTAAATTGGTTCACCCA
ATGGAAATCAATGATGAAGAAGAACAGTGTGTTTGGGTGGAAGGGCGTGA
TTATGAATTGTGCCAAATTGCTGCAGAATCTAAACGAAGTGAAATAAGGG
CGGCGTTGAAGGCTGAAGATTTAATGGAAAATGAAGAGAGTGCAGATAAC
GCCAAACAGGGTGTGGAAATGATGNTGAAGATTTAATGGAAAATGAAGGG
AGTGCAGATAACGCCAAACAGGGTGTGGAAATgatgaaaaaggaagaaaa
atcaaTGAAAGCCTCTTCAAGTCaggaaaatcctgaaaaatcaaCGCTAT
CGAATGCAAAGAAATCGGCTTGATAAATCGCTGGTCAATCATCTAAAAAG
ATGTCACCAAACAAACAGCGTAATAAATGAATATAATAATTGAAATCTTC
ATGTTCATAGTATGCTTTGTAATTTGAAGATGTTATTTTAAATGATTTGG
CTTTATGGTGAGATTTTTATCTAGTAATGATTGTAGGATAATGATCAAAT
TTGTGGAACTTCacaacacgcttttttataagaagatgaACGTTCTTAAT
AAGGGTTTTAAATCTGTTGAAATCCAGTAGTTTTTAGTAATTcttgaaat
ctgaggctcagattgttcttaatttgtttttaggTCTTAGGTTTTAGGCA
AATTTTCGGCctcgtgttcttttaaaattgttcttataaaaaacgtatat
atTTAGATATCTTTATTGTTCAGCAAGAAATATTCCAGACAGTAGAAAAC
CAAAACCAATTTAATAAATTTTAtactcgttgaaaagataattcagggca
ccataatttttaaaaatcaagatGGTGTGATCCTGCTATACACTAAGGCT
ACGGCGTATCTCCCTTTGTTATGAGCGTAAGACTCCAGAGTAATCCAGAA
TAAAGCCTTAAgactggagctgtctattgtgtagattAGACTTTAGCTAT
ATATATAATCATTTTTAGAATACACGTATTTCTATATTTATAAGAATTAA
CTATATAAAACTATATAGAAGCATCAGTCAGCAAAA Coding sequence (CDS) from alignment at scaffold_205:341115..343900+ >TCONS_00051832 ID=TCONS_00051832|Name=TCONS_00051832|organism=Clytia hemisphaerica|type=CDS|length=1836bp|location=Sequence derived from alignment at scaffold_205:341115..343900+ (Clytia hemisphaerica)
ACTGTGAAGGTCATTCGTATTTTGATGTCAGTTTGTGTTCAAGAAAATCT
TAAGAGGTCCTTTACCATGaagaaattgactttgtttttagTTTTGGTCT
TTGCTGCTACCAGATTTGGTTGCATTGACGCTTGTTCTTGTTTTCCGTCG
CAtcctcaagaattattttgtaaCTCTGAATTCGTAATCAAAGCTCTGAT
AACGTCATCTGGTCGAAATGTAACGAAAGATATTTTCTCGTATCGTTCTT
ACTCCCTAACCATCTTGGAAGTGTTCGGCGGTCACCAAGCACTACGTCAT
CTTTTCATCAGTAAACAAGAAGCGACAAATGTTGAGAGCAATGACATTGA
CACTTTTGAAGATTTGGAGTTTGTTGAAGCGAACATAACCACACCGTTGT
CCGAAAATTTGTGCGGTGTTCATTTGAATGTGTCCGAATCGTATCTCATT
TTTGGACAAATCCGCAATAATGAACTGCAAGTGAATTTGTGTAATTATAT
TTCATATTGGGAAGCAGTGAGCAGCCAAGTGAAGTCTGGAATTTTTGGTG
ATTATGATTGTCGCTGTAAAATCCGGACCCGAATGAGCCCAGAACAACCC
GTTGAGAGTAATGAAATCCCCAACGAAGGAACATTGAGGTCGAGTTCCAC
GTGTTTTTGGGAGATGTATCCGGATGAGCCTGTGGATGAATGTGCGTTGA
ATTTCTTATCATGTCGTAAATTGGTTCACCCAATGGAAATCAATGATGAA
GAAGAACAGTGTGTTTGGGTGGAAGGGCGTGATTATGAATTGTGCCAAAT
TGCTGCAGAATCTAAACGAAGTGAAATAAGGGCGGCGTTGAAGGCTGAAG
ATTTAATGGAAAATGAAGAGAGTGCAGATAACGCCAAACAGGGTGTGGAA
ATGATGNTGAAGATTTAAACTGTGAAGGTCATTCGTATTTTGATGTCAGT
TTGTGTTCAAGAAAATCTTAAGAGGTCCTTTACCATGaagaaattgactt
tgtttttagTTTTGGTCTTTGCTGCTACCAGATTTGGTTGCATTGACGCT
TGTTCTTGTTTTCCGTCGCAtcctcaagaattattttgtaaCTCTGAATT
CGTAATCAAAGCTCTGATAACGTCATCTGGTCGAAATGTAACGAAAGATA
TTTTCTCGTATCGTTCTTACTCCCTAACCATCTTGGAAGTGTTCGGCGGT
CACCAAGCACTACGTCATCTTTTCATCAGTAAACAAGAAGCGACAAATGT
TGAGAGCAATGACATTGACACTTTTGAAGATTTGGAGTTTGTTGAAGCGA
ACATAACCACACCGTTGTCCGAAAATTTGTGCGGTGTTCATTTGAATGTG
TCCGAATCGTATCTCATTTTTGGACAAATCCGCAATAATGAACTGCAAGT
GAATTTGTGTAATTATATTTCATATTGGGAAGCAGTGAGCAGCCAAGTGA
AGTCTGGAATTTTTGGTGATTATGATTGTCGCTGTAAAATCCGGACCCGA
ATGAGCCCAGAACAACCCGTTGAGAGTAATGAAATCCCCAACGAAGGAAC
ATTGAGGTCGAGTTCCACGTGTTTTTGGGAGATGTATCCGGATGAGCCTG
TGGATGAATGTGCGTTGAATTTCTTATCATGTCGTAAATTGGTTCACCCA
ATGGAAATCAATGATGAAGAAGAACAGTGTGTTTGGGTGGAAGGGCGTGA
TTATGAATTGTGCCAAATTGCTGCAGAATCTAAACGAAGTGAAATAAGGG
CGGCGTTGAAGGCTGAAGATTTAATGGAAAATGAAGAGAGTGCAGATAAC
GCCAAACAGGGTGTGGAAATGATGNTGAAGATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051832-exon-scaffold_205-1491911889:341115..341299 | TCONS_00051832-exon-scaffold_205-1491911889:341115..341299 | Clytia hemisphaerica | exon |
| TCONS_00051832-exon-scaffold_205-1510915933:341115..341299 | TCONS_00051832-exon-scaffold_205-1510915933:341115..341299 | Clytia hemisphaerica | exon |
| TCONS_00051832-exon-scaffold_205-1575043694:341115..341299 | TCONS_00051832-exon-scaffold_205-1575043694:341115..341299 | Clytia hemisphaerica | exon |
| TCONS_00051832-exon-scaffold_205-1491911889:342317..343900 | TCONS_00051832-exon-scaffold_205-1491911889:342317..343900 | Clytia hemisphaerica | exon |
| TCONS_00051832-exon-scaffold_205-1510915933:342317..343900 | TCONS_00051832-exon-scaffold_205-1510915933:342317..343900 | Clytia hemisphaerica | exon |
| TCONS_00051832-exon-scaffold_205-1575043694:342317..343900 | TCONS_00051832-exon-scaffold_205-1575043694:342317..343900 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:341115..343900 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008191 | metalloendopeptidase inhibitor activity |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008191 |
metalloendopeptidase inhibitor activity |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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