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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051382 ID=TCONS_00051382|Name=TCONS_00051382|organism=Clytia hemisphaerica|type=transcript|length=1807bp TCATGCTGTAAGGAAAATTACCTTCCTGTTATTACTCAAGGAAAAtgata ttatatttttcaaggaaaatgatttaaatttaaattcctCAAGTAATTTT TTGATTGATACACTCTGAATTGTTTGACATCaacagtttaaaaaaagatt cctcCCCCTCCTAGTAAATTTTTATAACCACTAATGAAATCATTCCATTT TTAAGGAACTCAAAAAAAACTATATGATGACAACACACGTTTGTAATAAG AATGACAGTTCAAAGCAAAGGTTTGGTGTGGTTCGTATCAAACCTTTAGG TGCTGGTGGAGGAGGGGTGGAAACAAGTTCCGCCACAGGAAAGTCAATCA TAGACTTCTCAAaggACCATGTTTCAGTTCGAGACCGCAAGAAATACAGT TATCCAAGCATGATTATCCCTCCTCGTATGAAACAAGATGAATTATTTGA TAACTTCATGCCAAAATGTATTGATGACTTCTTTCAAGGGTACAACGTGA ACGTGATTGCATACGGACAGACAGGGACGGGAAAAACACACACTATGTTT GGACCACCTGGTTGCATGAAACGTGCTGCCCGcGGAGAGTACAGTTACGA AACCCATCAAACTTATGGATTGTTCCCTCGTGGAATTTTGGAGATCTTTC GAAAAGTACATGAATGCAATACAACTGAATCACAATCATCATCATCGAAT ATTTACGCGTTGACGTGCTCAGCTGTGGAACTTTGCCATATGGGAAATGA GGATATGTTTAATAAGTCTGAGAAGAGAGATTATTCGTTTGCGAACGGCT CTGGTTCCCTTGGCATCATCTTGAACAGAGACGAGAAACCACCAAGGTTG TATGGACAGAATGAATATGAAATCAAAACCTATGATGATATCTTAAGAGT ATTTGCTGCAATCGCGTCACGAAACACGGAAGGCACGTTACTAAATGATA CGTCATCACGCTCACACTGTTTGGTCGCGCTGAAGTTGTGGCGATATGAC GTCAGTACTAAAATGGTGTTCAAAACACGATTTCAATTTTGTGATTTGGC AGGATCTGAAAAACTTGACAAGGCACATTCAGACACCTCCATGAAGCTGC CCAACGGTGAATGGAACCATCTAGCAATCATGGGGATGTCTACAAACTTC AGTTACACAGAACTCCAACGTTGTCTCAATGATATTGCAATACAAAAGAA ACAGAACAGGAAATTCAACTTTCGGGCATACGTCACAGATCTCTTATTCT TGCTTTCTGGAAGCCTCGTCGGAAATGCGATCACAGCGCTCTTCGTTTGT GTGTCTCAAGCAGAATCTAATAAAGCTGAATCGAATTACGCGTTAGATTT CGGTGAAAAGTTCTCTAAACTGGATATGAATTGCCAGAAAGTAAAAGGAC GTCTTTTAGAGGATCTCCAAAAAGAGTTATTGAAATCAATCGATGATAAT TGTCGACAGATAGATAGTGCTTCGACTTGGAAAAACCGGTATACTATGAT GAGAAAAGCTCAAGTTCGTGATTGTGAAcaaatattgaatgttttgaagA ACTTTAGTGAAGAAAAAATGGGTAGTGTGAAATCAATGAACTGAAGCTCA TGAATTGACCTACAACgtttgctgacgtgtggaattTCAATTTGGTAGGT AATAGAAATTGACAGTCAAAAAAATAATGACTTTAGAAAATAGAACTTTT CATagattacgttacgaacatcattcgcctcgttttgaaattattgccat ggtaattaactcccagcggattttattaaaacatttcctattcataaaaa atcaatt Run BLAST on NCBI protein sequence of TCONS_00051382-protein >TCONS_00051382-protein ID=TCONS_00051382-protein|Name=TCONS_00051382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=456bp
MMTTHVCNKNDSSKQRFGVVRIKPLGAGGGGVETSSATGKSIIDFSKDHV SVRDRKKYSYPSMIIPPRMKQDELFDNFMPKCIDDFFQGYNVNVIAYGQT GTGKTHTMFGPPGCMKRAARGEYSYETHQTYGLFPRGILEIFRKVHECNT TESQSSSSNIYALTCSAVELCHMGNEDMFNKSEKRDYSFANGSGSLGIIL NRDEKPPRLYGQNEYEIKTYDDILRVFAAIASRNTEGTLLNDTSSRSHCL VALKLWRYDVSTKMVFKTRFQFCDLAGSEKLDKAHSDTSMKLPNGEWNHL AIMGMSTNFSYTELQRCLNDIAIQKKQNRKFNFRAYVTDLLFLLSGSLVG NAITALFVCVSQAESNKAESNYALDFGEKFSKLDMNCQKVKGRLLEDLQK ELLKSIDDNCRQIDSASTWKNRYTMMRKAQVRDCEQILNVLKNFSEEKMG SVKSMN Run BLAST on NCBI transcript from alignment at scaffold_201:332236..343922+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051382 ID=TCONS_00051382|Name=TCONS_00051382|organism=Clytia hemisphaerica|type=transcript|length=11687bp|location=Sequence derived from alignment at scaffold_201:332236..343922+ (Clytia hemisphaerica) TCATGCTGTAAGGAAAATTACCTTCCTGTTATTACTCAAGGAAAAtgata
ttatatttttcaaggaaaatgatttaaatttaaattcctCAAGTAATTTT
TTGATTGATACACTCTGAATTGTTTGACATCaacagtttaaaaaaagatt
cctcCCCCTCCTAGTAAATTTTTATAACCACTAATGAAATCATTCCATTT
TTAAGGAACTCAAAAAAAACTATATGATGACAACACACGTTTGTAATAAG
AATGACAGTTCAAAGCAAAGGTTTGGTGTGGTTCGTATCAAACCTTTAGG
TGCTGGTGGAGGAGGGGTGGAAACAAGTTCCGCCACAGGAAAGTCAATCA
TAGACTTCTCAAaggttttttgtgtttttattttgttccaGTATTGGTTT
TTCAGGAAAATGATTCCCAGTTGCAGAGGAAGTGATCTTCATTATATTTC
TGGGAATATAACCCCTGTGTGTAAGATACATCTTACACAagggaatttat
ttttcaataaaaaacatatCTTTATAATTCTAAAGGAAAATCACTTTCCT
GATATCTCAAGAAATAAATGTTTTTTGCAAGACAAATTATGTTTTTGTTC
TCATAGAAACTGATAGAAATGATGTTCTGAATgctctttatatttttttt
ccaggaaATTTTAACATAACGTCAGACTGGGTTTAGGTCGCAGAAATTAG
GTTCCctctgagttttaagtcccccaaaagattcataaatttttttggta
GCCCCCAGGGCTTTCTACCCTCAacacttttaaaagtttttcaatttcaa
tttcacttTGAAAACTACTTATGTagtatttttcaagaaaattaccgttg
tatttctcaaggaaaattgCCTATGTTATTCTcaaagaaaatcttttggt
aTTCTCAAGtaaaattacttttttgtatttctcaaggaaaattactcttc
tatttctaaaggaaaattatttttgtatttctcaaggaaaaccagggggg
cacgcagttactacaagacatgatgtgtagtaagtgctttttcaacactt
tttttcaggaccaccaccctttgcagttactacNtaagcacttactacac
caaaagtgctagcgttagtgtttggcaccacccccaaacagcagttacta
cactgtgtagtaactgttttcataatacagtaccaccacggtagtaagtg
tcatactgtcttgtagtaactgcgtgcccccccccccacctgGGAAAACT
AcctttgtatttctcaaggagaATTACCTTTGCATTTTCTCAaggaaagc
ttttttttttactgGCATATTTAAAAAGTCTTACAGACCTACTTTTCCGG
GACAGTTAATTGTCTTGTTGTCTGGTaggtttatttttttcattttttaa
taatttattaCTGTATCCCTTTCATAACCTTcagtcttctttttttaata
ggACCATGTTTCAGTTCGAGACCGCAAGAAATACAGTTATCCAAGCATGA
TTATCCCTCCTCGTATGAAACAAGATGAATTATTTGATAACTTCATGCCA
AAATGTATTGATGACTTCTTTCAAGGTATCCAAAAAAATACTGCTAAATA
TCAATAGATTATAACTACCAAGAAATGACATCAATGGGTCTTGATGAATG
ATTGTCTATCATATTACATCGTGCTGTGTCGTGTTGTGATTGTCTTTTGA
TTTTCCATTTAGTGTAAAAGTTTTCTAATTTGTTTGTTAGGGTACAACGT
GAACGTGATTGCATACGGACAGACAGGGACGGGAAAAACACACACTATGT
TTGGACCACCTGGTTGCATGAAACGTGCTGCCCGGTAAGTTTGATTCTGG
TTTTGTTTAAACAAATTAATTTTATGGGATAGTGTTAAAATGAAAGTATT
TTTAATAGAGTACAGAAATTATGATTTTATCCAATGGGAGGGACTGATTT
ATATATCATGATAAGATTTTGCCATCGCTTCACTATCATTGATACACTTT
CCATTTCTGAAGTTTGCTGTTAGATTGACTTGATTAATCAAAACATGCAT
CCCGAAGTTGAATATTATATAGAATGGTTGCGCTAAATTCAGTTTTATAA
ACAATCTTCAACCAAAACCAAAACCTGTTAACCGTTTCTAATCAACATAA
TCAATTTCAACCACAGAAAAAAAAGGGACAAAACTGTGCGACAAAgggga
aatatttttaaaatgtttgtgCTAAGGAGGAAGGGCTAGATCACCTGTAC
ATACTCTCTTTCTGCCATTTCTAGAAAAAATGGCTGATTGTCGGTAAGAA
TTACAGTTGTTTACAGTCTGTTTGTGTAATTGGAAAATTTCCTGGATCAA
GCAAAAGTTTTAATTGATCTTTATTTTCAGCGGAGAGTACAGTTTACGAA
ACCCATCAAACTTATGGATTGTTCCCTCGTGGAATTTTGGAGATCTTTCA
AAAAGTACATGAATGCAATAAAAATTACAGTTGTTTACAGTCTGTTTGtg
taattgataaattttctgGATCAAGCAAAAGTTttaattattcattattt
tcagcGGAGAGTACAGTTACGAAACCCATCAAACTTATGGATTGTTCCCT
CGTGGAATTTTGGAGATCTTTCGAAAAGTACATGAATGCAATACAACTGA
ATCACAATCATCATCATCGAATATTTACGCGTTGACGTGCTCAGCTGTGG
AACTTTGCCATATGGGAAATGAGGATATGTTTAATAAGGTTTNTCACAAT
CATCATCATCGAATATTTACGCGTTGACGTGCTCAGCTGTGGAACTTTGC
CATATGGGAAATGAGGATATGTTTAATAAGGTTTTtaaatctacaatcag
tgacaaaatacttgacacaaaagggaaatccaacgggaagttttgaaacc
acaatcgatttgttagtgctctaaagtaggttcgaagggtagagttttaa
ctctgagttttaacgctagacttaagacctttgtgcactaactccaaaca
aaagaaaagtgtcaatattgcaattaaaattttttcccgctcaaaaaaga
TTCTTCGAAAAAATAAATGAGTGTGGATTTGNgaaaagtgtcaatattgc
aattaaaattttttcccgctcaaaaaagattcttcgaaaaaataaatgag
tgtggatttgtttgttaaaaattcttcatttgagttgattttgttttaag
agtttgttgttgcttgataaattgttttctcgctacgcaagtttctgctt
ACCTAGCCCCAGTATCTATAAGgccggaacaccggattcttccaggcgtt
tatacaaactaaaacCTGtgacaataatcgtattatcatataacgcctat
actactgatTTTAAACACATTATAAATGACTCCAGTCTATAAGGTTTGTA
TTTATTTGGATTTCATCGAATTTGCTTATTGGATGTTGAAAAGTTTAAAC
ATTCATTGTATAaactggtctggaagcttatgtttcaactttttgttagt
ttttttttcttttgttattgatcacgttaccaagtactcttcttgggatt
ggtttaatatttaatcacgtgatcaaaaagtgagcaaaacaagcaaattt
ttcaactcaagttcaagtaagaaacaatggaaagaaacaaaaggcttcca
gaccggggttttttatacggactatcgGGGTGGAAAAATGGTGGAAAAAT
CTCCGTAGACACTCTGACTATGTCGTTACGTTTGAACATGATCTGACTAT
CAGGATCTTTGGAAACATATTCCCTCTTCTTTTTGACAGTCTGAGAAGAG
AGATTATTCGTTTGCGAACGGCTCTGGTTCCCTTGGCATCATCTTGAACA
GAGACGAGAAACCACCAAGGTTGTATGGACAGAATGAATATGAAATCAAA
ACCTATGATGATATCTTAAGGTACCAATTCCATGTCTTCTTTGTTAATCA
GGGGTAGCAAAAACATCACTAAtctctaactacttgactggatcggtCTT
TCTATGTATAAgaagtgtgtccagttttaCAGCTGACTAATCTGCCATCT
TGATTTCAATTCTGCTCGTCAACAGttagattcgaatgttttgaaatttg
aacgtTTGAAAATCTCGGGTAAAATAGAAGACAAATTAGAGGACTAATCG
ACTTAAAAGCTGGACATAATTTCACAAAGAATCTGTAAGCACAGTTAGCC
TATCTAgtgtgtaaaagaatatgatatcTGTGAAAACGAGGCGAAACCAA
AGTTGGCGCAGGCgggagaaaatttcgattttgcctCAAAAATGAAGCTA
CAGTGATTATTTAataaaagaactttttatttgaaaaaaagtgaggCCTT
GTCAAGTATGTTATGTGTTAAAAATGATCAACTTTGTGCTTAAAGACGTA
TATGTGAAGGGGTGTATGCATGATGATAATAAGATTGGAAAAGTTTCGCA
TGAATGTAAACCACAAGCCATCAATTGAAGTGATAATGATTTGTTTGTCT
CTTAGAATGAAGATAATTCTCTTCTTTTGATTTCGTCACCAGAGTATTTG
CTGCAATCGCGTCACGAAACACGGAAGGCACGTTACTAAATGATACGTCA
TCACGCTCACACTGTTTGGTCGCGCTGAAGTTGTGGCGATATGACGTCAG
TACTAAAATGGTGTTCAAAACACGATTTCAATTTTGTGATTTGGCAGGAT
CTGAAAAACTTGACAAGGTATAAAAACTATTATTAACTTATTCGCAAACG
GATTTGTATTGTATGataaaaggaaatattttgatttttaggggcttggt
cacgagttttagcctcaaaacgaggctaaaaactttggaaaactttgata
ttttgcacacttgttccttggctATATATctggtttttggacctacctcc
gggtgccccggtggaggtcctatgaattaacctgtgtatgttcgttcgtt
cgttcgtccgtccgttcgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAC
CCAGAGCATGCTCAGAACTGCTTGTTTGgtgtatattcttttatatattc
atggttcttgcagaaaatgtttttgagaaagccatagataaaagagcaaa
tactgtaaatggttttgaagaaaagtttgaagaaaaaataagacaattta
taatattaaatactttacacacttcagtttcatttcgtgaatatttaaaa
catagtaaaaaagttcgataatttattcttataaccatttttttatgaaa
tttctttgtagcgaattaattggctgacaatcaagcaaaaacttttcatg
ttgagtatgtttacattataaaaccaaaaatggattatattttgaaaaca
gtgatcaagttaaaaaataaaggagattatttatataatacatacaaggg
aatacaatatattcttaagatggaaaaataaaagattgccaaaaagtggA
GTACACCATGAGTGGATATAATGTGTTTTATGCGCAAATTCTAGCTCTCA
AATTAGATGAATAATCtgataaaaaagtactttttacattcaaagtaaaa
agtttgatgttttaAGCATTATTAAAAGTACTAACAGAAATCATCAACAA
TCTAtaggaaagcactttttcaactttcacaattgtatggagtattgttt
ataattcttttggtagagattgttgttatatatcatttcaaaaattctgc
attcaatcgtactcttttatgcttacttgtagggggtggaagatgcaGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNccccctcagatccgccgctgTAATAACCATAAT
TTCTGACGAGAAAGTTCagtatttttggtaaaaatactGATCGGTTCGTA
AAATACTAACCAGACAGGGTGACCAAACTGAAATGTTGGATTTGccggaa
aaatcttttcattttctcttattTAACTCCAATATTTTGCCTTTTATATT
AGGCACATTCAGACACCTCCATGAAGCTGCCCAACGGTGAATGGAACCAT
CTAGCAATCATGGGGATGTCTACAAACTTCAGTTACACAGAACTCCAACG
TTGTCTCAATGATATTGCAATACAAAAGAAACAGAACAGGAAATTCAACT
TTCGGGCATACGTCACAGATCTCTTATTCTTGCTTTCTGGAAGCCTCGTC
GGAAATGCGATCACAGCGCTCTTCGTTTGTGTGTCTCAAGCAGAATCTAA
TAAAGCTGAATCGAATTACGCGTTAGATTTCGGTGAAAAGTTCTCTAAAC
TGGATATGAATTGCCAGAAAGTAAAAGGACGTCTTTTAGAGGATCTCCAA
AAAGAGTTATTGAAATCAATCGATGATAATTGTCGACAGATAGATAGTGC
TTCGACTTGGAAAAACCGGTATACTATGATGAGAAAAGCTCAAGTTCGTG
ATTGTGAAcaaatattgaatgttttgaagAACTTTAGTGAAGAAAAAATG
GGTAGTGTGAAATCAATGAACTGAAGCTCATGAATTGACCTACAACgttt
gctgacgtgtggaattTCAATTTGGTAGGTAATAGAAATTGACAGTCAAA
AAAATAATGACTTTAGAAAATAGAACTTTTCATagattacgttacgaaca
tcattcgcctcgttttgaaattattgccatggtaattaactcccagcgga
ttttattaaaacatttcctattcataaaaaatcaatt Coding sequence (CDS) from alignment at scaffold_201:332236..343922+ >TCONS_00051382 ID=TCONS_00051382|Name=TCONS_00051382|organism=Clytia hemisphaerica|type=CDS|length=9597bp|location=Sequence derived from alignment at scaffold_201:332236..343922+ (Clytia hemisphaerica) ATGATGACAACACACGTTTGTAATAAGAATGACAGTTCAAAGCAAAGGTT TGGTGTGGTTCGTATCAAACCTTTAGGTGCTGGTGGAGGAGGGGTGGAAA CAAGTTCCGCCACAGGAAAGTCAATCATAGACTTCTCAAaggACCATGTT TCAGTTCGAGACCGCAAGAAATACAGTTATCCAAGCATGATTATCCCTCC TCGTATGAAACAAGATGAATTATTTGATAACTTCATGCCAAAATGTATTG ATGACTTCTTTCAAGGGTACAACGTGAACGTGATTGCATACGGACAGACA GGGACGGGAAAAACACACACTATGTTTGGACCACCTGGTTGCATGAAACG TGCTGCCCGcGGAGAGTACAGTTACGAAACCCATCAAACTTATGGATTGT TCCCTCGTGGAATTTTGGAGATCTTTCGAAAAGTACATGAATGCAATACA ACTGAATCACAATCATCATCATCGAATATTTACGCGTTGACGTGCTCAGC TGTGGAACTTTGCCATATGGGAAATGAGGATATGTTTAATAAGTCTGAGA AGAGAGATTATTCGTTTGCGAACGGCTCTGGTTCCCTTGGCATCATCTTG AACAGAGACGAGAAACCACCAAGGTTGTATGGACAGAATGAATATGAAAT CAAAACCTATGATGATATCTTAAGAGTATTTGCTGCAATCGCGTCACGAA ACACGGAAGGCACGTTACTAAATGATACGTCATCACGCTCACACTGTTTG GTCGCGCTGAAGTTGTGGCGATATGACGTCAGTACTAAAATGGTGTTCAA AACACGATTTCAATTTTGTGATTTGGCAGGATCTGAAAAACTTGACAAGG CACATTCAGACACCTCCATGAAGCTGCCCAACGGTGAATGGAACCATCTA GCAATCATGGGGATGTCTACAAACTTCAGTTACACAGAACTCCAACGTTG TCTCAATGATATTGCAATACAAAAGAAACAGAACAGGAAATTCAACTTTC GGGCATACGTCACAGATCTCTTATTCTTGCTTTCTGGAAGCCTCGTCGGA AATGCGATCACAGCGCTCTTCGTTTGTGTGTCTCAAGCAGAATCTAATAA AGCTGAATCGAATTACGCGTTAGATTTCGGTGAAAAGTTCTCTAAACTGG ATATGAATTGCCAGAAAGTAAAAGGACGTCTTTTAGAGGATCTCCAAAAA GAGTTATTGAAATCAATCGATGATAATTGTCGACAGATAGATAGTGCTTC GACTTGGAAAAACCGGTATACTATGATGAGAAAAGCTCAAGTTCGTGATT GTGAAcaaatattgaatgttttgaagAACTTTAGTGAAGAAAAAATGGGT AGTGTGAAATCAATGAACTGAATGATGACAACACACGTTTGTAATAAGAA TGACAGTTCAAAGCAAAGGTTTGGTGTGGTTCGTATCAAACCTTTAGGTG CTGGTGGAGGAGGGGTGGAAACAAGTTCCGCCACAGGAAAGTCAATCATA GACTTCTCAAaggACCATGTTTCAGTTCGAGACCGCAAGAAATACAGTTA TCCAAGCATGATTATCCCTCCTCGTATGAAACAAGATGAATTATTTGATA ACTTCATGCCAAAATGTATTGATGACTTCTTTCAAGGGTACAACGTGAAC GTGATTGCATACGGACAGACAGGGACGGGAAAAACACACACTATGTTTGG ACCACCTGGTTGCATGAAACGTGCTGCCCGcGGAGAGTACAGTTACGAAA CCCATCAAACTTATGGATTGTTCCCTCGTGGAATTTTGGAGATCTTTCGA AAAGTACATGAATGCAATACAACTGAATCACAATCATCATCATCGAATAT TTACGCGTTGACGTGCTCAGCTGTGGAACTTTGCCATATGGGAAATGAGG ATATGTTTAATAAGTCTGAGAAGAGAGATTATTCGTTTGCGAACGGCTCT GGTTCCCTTGGCATCATCTTGAACAGAGACGAGAAACCACCAAGGTTGTA TGGACAGAATGAATATGAAATCAAAACCTATGATGATATCTTAAGAGTAT TTGCTGCAATCGCGTCACGAAACACGGAAGGCACGTTACTAAATGATACG TCATCACGCTCACACTGTTTGGTCGCGCTGAAGTTGTGGCGATATGACGT CAGTACTAAAATGGTGTTCAAAACACGATTTCAATTTTGTGATTTGGCAG GATCTGAAAAACTTGACAAGGCACATTCAGACACCTCCATGAAGCTGCCC AACGGTGAATGGAACCATCTAGCAATCATGGGGATGTCTACAAACTTCAG TTACACAGAACTCCAACGTTGTCTCAATGATATTGCAATACAAAAGAAAC AGAACAGGAAATTCAACTTTCGGGCATACGTCACAGATCTCTTATTCTTG CTTTCTGGAAGCCTCGTCGGAAATGCGATCACAGCGCTCTTCGTTTGTGT GTCTCAAGCAGAATCTAATAAAGCTGAATCGAATTACGCGTTAGATTTCG GTGAAAAGTTCTCTAAACTGGATATGAATTGCCAGAAAGTAAAAGGACGT CTTTTAGAGGATCTCCAAAAAGAGTTATTGAAATCAATCGATGATAATTG TCGACAGATAGATAGTGCTTCGACTTGGAAAAACCGGTATACTATGATGA GAAAAGCTCAAGTTCGTGATTGTGAAcaaatattgaatgttttgaagAAC TTTAGTGAAGAAAAAATGGGTAGTGTGAAATCAATGAACTGAATGATGAC AACACACGTTTGTAATAAGAATGACAGTTCAAAGCAAAGGTTTGGTGTGG TTCGTATCAAACCTTTAGGTGCTGGTGGAGGAGGGGTGGAAACAAGTTCC GCCACAGGAAAGTCAATCATAGACTTCTCAAaggACCATGTTTCAGTTCG AGACCGCAAGAAATACAGTTATCCAAGCATGATTATCCCTCCTCGTATGA AACAAGATGAATTATTTGATAACTTCATGCCAAAATGTATTGATGACTTC TTTCAAGGGTACAACGTGAACGTGATTGCATACGGACAGACAGGGACGGG AAAAACACACACTATGTTTGGACCACCTGGTTGCATGAAACGTGCTGCCC GcGGAGAGTACAGTTACGAAACCCATCAAACTTATGGATTGTTCCCTCGT GGAATTTTGGAGATCTTTCGAAAAGTACATGAATGCAATACAACTGAATC ACAATCATCATCATCGAATATTTACGCGTTGACGTGCTCAGCTGTGGAAC TTTGCCATATGGGAAATGAGGATATGTTTAATAAGTCTGAGAAGAGAGAT TATTCGTTTGCGAACGGCTCTGGTTCCCTTGGCATCATCTTGAACAGAGA CGAGAAACCACCAAGGTTGTATGGACAGAATGAATATGAAATCAAAACCT ATGATGATATCTTAAGAGTATTTGCTGCAATCGCGTCACGAAACACGGAA GGCACGTTACTAAATGATACGTCATCACGCTCACACTGTTTGGTCGCGCT GAAGTTGTGGCGATATGACGTCAGTACTAAAATGGTGTTCAAAACACGAT TTCAATTTTGTGATTTGGCAGGATCTGAAAAACTTGACAAGGCACATTCA GACACCTCCATGAAGCTGCCCAACGGTGAATGGAACCATCTAGCAATCAT GGGGATGTCTACAAACTTCAGTTACACAGAACTCCAACGTTGTCTCAATG ATATTGCAATACAAAAGAAACAGAACAGGAAATTCAACTTTCGGGCATAC GTCACAGATCTCTTATTCTTGCTTTCTGGAAGCCTCGTCGGAAATGCGAT CACAGCGCTCTTCGTTTGTGTGTCTCAAGCAGAATCTAATAAAGCTGAAT CGAATTACGCGTTAGATTTCGGTGAAAAGTTCTCTAAACTGGATATGAAT TGCCAGAAAGTAAAAGGACGTCTTTTAGAGGATCTCCAAAAAGAGTTATT GAAATCAATCGATGATAATTGTCGACAGATAGATAGTGCTTCGACTTGGA AAAACCGGTATACTATGATGAGAAAAGCTCAAGTTCGTGATTGTGAAcaa atattgaatgttttgaagAACTTTAGTGAAGAAAAAATGGGTAGTGTGAA ATCAATGAACTGAATGATGACAACACACGTTTGTAATAAGAATGACAGTT CAAAGCAAAGGTTTGGTGTGGTTCGTATCAAACCTTTAGGTGCTGGTGGA GGAGGGGTGGAAACAAGTTCCGCCACAGGAAAGTCAATCATAGACTTCTC AAaggACCATGTTTCAGTTCGAGACCGCAAGAAATACAGTTATCCAAGCA TGATTATCCCTCCTCGTATGAAACAAGATGAATTATTTGATAACTTCATG CCAAAATGTATTGATGACTTCTTTCAAGGGTACAACGTGAACGTGATTGC ATACGGACAGACAGGGACGGGAAAAACACACACTATGTTTGGACCACCTG GTTGCATGAAACGTGCTGCCCGcGGAGAGTACAGTTACGAAACCCATCAA ACTTATGGATTGTTCCCTCGTGGAATTTTGGAGATCTTTCGAAAAGTACA TGAATGCAATACAACTGAATCACAATCATCATCATCGAATATTTACGCGT TGACGTGCTCAGCTGTGGAACTTTGCCATATGGGAAATGAGGATATGTTT AATAAGTCTGAGAAGAGAGATTATTCGTTTGCGAACGGCTCTGGTTCCCT TGGCATCATCTTGAACAGAGACGAGAAACCACCAAGGTTGTATGGACAGA ATGAATATGAAATCAAAACCTATGATGATATCTTAAGAGTATTTGCTGCA ATCGCGTCACGAAACACGGAAGGCACGTTACTAAATGATACGTCATCACG CTCACACTGTTTGGTCGCGCTGAAGTTGTGGCGATATGACGTCAGTACTA AAATGGTGTTCAAAACACGATTTCAATTTTGTGATTTGGCAGGATCTGAA AAACTTGACAAGGCACATTCAGACACCTCCATGAAGCTGCCCAACGGTGA ATGGAACCATCTAGCAATCATGGGGATGTCTACAAACTTCAGTTACACAG AACTCCAACGTTGTCTCAATGATATTGCAATACAAAAGAAACAGAACAGG AAATTCAACTTTCGGGCATACGTCACAGATCTCTTATTCTTGCTTTCTGG AAGCCTCGTCGGAAATGCGATCACAGCGCTCTTCGTTTGTGTGTCTCAAG CAGAATCTAATAAAGCTGAATCGAATTACGCGTTAGATTTCGGTGAAAAG TTCTCTAAACTGGATATGAATTGCCAGAAAGTAAAAGGACGTCTTTTAGA GGATCTCCAAAAAGAGTTATTGAAATCAATCGATGATAATTGTCGACAGA TAGATAGTGCTTCGACTTGGAAAAACCGGTATACTATGATGAGAAAAGCT CAAGTTCGTGATTGTGAAcaaatattgaatgttttgaagAACTTTAGTGA AGAAAAAATGGGTAGTGTGAAATCAATGAACTGAATGATGACAACACACG TTTGTAATAAGAATGACAGTTCAAAGCAAAGGTTTGGTGTGGTTCGTATC AAACCTTTAGGTGCTGGTGGAGGAGGGGTGGAAACAAGTTCCGCCACAGG AAAGTCAATCATAGACTTCTCAAaggACCATGTTTCAGTTCGAGACCGCA AGAAATACAGTTATCCAAGCATGATTATCCCTCCTCGTATGAAACAAGAT GAATTATTTGATAACTTCATGCCAAAATGTATTGATGACTTCTTTCAAGG GTACAACGTGAACGTGATTGCATACGGACAGACAGGGACGGGAAAAACAC ACACTATGTTTGGACCACCTGGTTGCATGAAACGTGCTGCCCGcGGAGAG TACAGTTACGAAACCCATCAAACTTATGGATTGTTCCCTCGTGGAATTTT GGAGATCTTTCGAAAAGTACATGAATGCAATACAACTGAATCACAATCAT CATCATCGAATATTTACGCGTTGACGTGCTCAGCTGTGGAACTTTGCCAT ATGGGAAATGAGGATATGTTTAATAAGTCTGAGAAGAGAGATTATTCGTT TGCGAACGGCTCTGGTTCCCTTGGCATCATCTTGAACAGAGACGAGAAAC CACCAAGGTTGTATGGACAGAATGAATATGAAATCAAAACCTATGATGAT ATCTTAAGAGTATTTGCTGCAATCGCGTCACGAAACACGGAAGGCACGTT ACTAAATGATACGTCATCACGCTCACACTGTTTGGTCGCGCTGAAGTTGT GGCGATATGACGTCAGTACTAAAATGGTGTTCAAAACACGATTTCAATTT TGTGATTTGGCAGGATCTGAAAAACTTGACAAGGCACATTCAGACACCTC CATGAAGCTGCCCAACGGTGAATGGAACCATCTAGCAATCATGGGGATGT CTACAAACTTCAGTTACACAGAACTCCAACGTTGTCTCAATGATATTGCA ATACAAAAGAAACAGAACAGGAAATTCAACTTTCGGGCATACGTCACAGA TCTCTTATTCTTGCTTTCTGGAAGCCTCGTCGGAAATGCGATCACAGCGC TCTTCGTTTGTGTGTCTCAAGCAGAATCTAATAAAGCTGAATCGAATTAC GCGTTAGATTTCGGTGAAAAGTTCTCTAAACTGGATATGAATTGCCAGAA AGTAAAAGGACGTCTTTTAGAGGATCTCCAAAAAGAGTTATTGAAATCAA TCGATGATAATTGTCGACAGATAGATAGTGCTTCGACTTGGAAAAACCGG TATACTATGATGAGAAAAGCTCAAGTTCGTGATTGTGAAcaaatattgaa tgttttgaagAACTTTAGTGAAGAAAAAATGGGTAGTGTGAAATCAATGA ACTGAATGATGACAACACACGTTTGTAATAAGAATGACAGTTCAAAGCAA AGGTTTGGTGTGGTTCGTATCAAACCTTTAGGTGCTGGTGGAGGAGGGGT GGAAACAAGTTCCGCCACAGGAAAGTCAATCATAGACTTCTCAAaggACC ATGTTTCAGTTCGAGACCGCAAGAAATACAGTTATCCAAGCATGATTATC CCTCCTCGTATGAAACAAGATGAATTATTTGATAACTTCATGCCAAAATG TATTGATGACTTCTTTCAAGGGTACAACGTGAACGTGATTGCATACGGAC AGACAGGGACGGGAAAAACACACACTATGTTTGGACCACCTGGTTGCATG AAACGTGCTGCCCGcGGAGAGTACAGTTACGAAACCCATCAAACTTATGG ATTGTTCCCTCGTGGAATTTTGGAGATCTTTCGAAAAGTACATGAATGCA ATACAACTGAATCACAATCATCATCATCGAATATTTACGCGTTGACGTGC TCAGCTGTGGAACTTTGCCATATGGGAAATGAGGATATGTTTAATAAGTC TGAGAAGAGAGATTATTCGTTTGCGAACGGCTCTGGTTCCCTTGGCATCA TCTTGAACAGAGACGAGAAACCACCAAGGTTGTATGGACAGAATGAATAT GAAATCAAAACCTATGATGATATCTTAAGAGTATTTGCTGCAATCGCGTC ACGAAACACGGAAGGCACGTTACTAAATGATACGTCATCACGCTCACACT GTTTGGTCGCGCTGAAGTTGTGGCGATATGACGTCAGTACTAAAATGGTG TTCAAAACACGATTTCAATTTTGTGATTTGGCAGGATCTGAAAAACTTGA CAAGGCACATTCAGACACCTCCATGAAGCTGCCCAACGGTGAATGGAACC ATCTAGCAATCATGGGGATGTCTACAAACTTCAGTTACACAGAACTCCAA CGTTGTCTCAATGATATTGCAATACAAAAGAAACAGAACAGGAAATTCAA CTTTCGGGCATACGTCACAGATCTCTTATTCTTGCTTTCTGGAAGCCTCG TCGGAAATGCGATCACAGCGCTCTTCGTTTGTGTGTCTCAAGCAGAATCT AATAAAGCTGAATCGAATTACGCGTTAGATTTCGGTGAAAAGTTCTCTAA ACTGGATATGAATTGCCAGAAAGTAAAAGGACGTCTTTTAGAGGATCTCC AAAAAGAGTTATTGAAATCAATCGATGATAATTGTCGACAGATAGATAGT GCTTCGACTTGGAAAAACCGGTATACTATGATGAGAAAAGCTCAAGTTCG TGATTGTGAAcaaatattgaatgttttgaagAACTTTAGTGAAGAAAAAA TGGGTAGTGTGAAATCAATGAACTGAATGATGACAACACACGTTTGTAAT AAGAATGACAGTTCAAAGCAAAGGTTTGGTGTGGTTCGTATCAAACCTTT AGGTGCTGGTGGAGGAGGGGTGGAAACAAGTTCCGCCACAGGAAAGTCAA TCATAGACTTCTCAAaggACCATGTTTCAGTTCGAGACCGCAAGAAATAC AGTTATCCAAGCATGATTATCCCTCCTCGTATGAAACAAGATGAATTATT TGATAACTTCATGCCAAAATGTATTGATGACTTCTTTCAAGGGTACAACG TGAACGTGATTGCATACGGACAGACAGGGACGGGAAAAACACACACTATG TTTGGACCACCTGGTTGCATGAAACGTGCTGCCCGcGGAGAGTACAGTTA CGAAACCCATCAAACTTATGGATTGTTCCCTCGTGGAATTTTGGAGATCT TTCGAAAAGTACATGAATGCAATACAACTGAATCACAATCATCATCATCG AATATTTACGCGTTGACGTGCTCAGCTGTGGAACTTTGCCATATGGGAAA TGAGGATATGTTTAATAAGTCTGAGAAGAGAGATTATTCGTTTGCGAACG GCTCTGGTTCCCTTGGCATCATCTTGAACAGAGACGAGAAACCACCAAGG TTGTATGGACAGAATGAATATGAAATCAAAACCTATGATGATATCTTAAG AGTATTTGCTGCAATCGCGTCACGAAACACGGAAGGCACGTTACTAAATG ATACGTCATCACGCTCACACTGTTTGGTCGCGCTGAAGTTGTGGCGATAT GACGTCAGTACTAAAATGGTGTTCAAAACACGATTTCAATTTTGTGATTT GGCAGGATCTGAAAAACTTGACAAGGCACATTCAGACACCTCCATGAAGC TGCCCAACGGTGAATGGAACCATCTAGCAATCATGGGGATGTCTACAAAC TTCAGTTACACAGAACTCCAACGTTGTCTCAATGATATTGCAATACAAAA GAAACAGAACAGGAAATTCAACTTTCGGGCATACGTCACAGATCTCTTAT TCTTGCTTTCTGGAAGCCTCGTCGGAAATGCGATCACAGCGCTCTTCGTT TGTGTGTCTCAAGCAGAATCTAATAAAGCTGAATCGAATTACGCGTTAGA TTTCGGTGAAAAGTTCTCTAAACTGGATATGAATTGCCAGAAAGTAAAAG GACGTCTTTTAGAGGATCTCCAAAAAGAGTTATTGAAATCAATCGATGAT AATTGTCGACAGATAGATAGTGCTTCGACTTGGAAAAACCGGTATACTAT GATGAGAAAAGCTCAAGTTCGTGATTGTGAAcaaatattgaatgttttga agAACTTTAGTGAAGAAAAAATGGGTAGTGTGAAATCAATGAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051382-exon-scaffold_201-1491911889:332236..332599 | TCONS_00051382-exon-scaffold_201-1491911889:332236..332599 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:332236..332599 | TCONS_00051382-exon-scaffold_201-1510915933:332236..332599 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:332236..332599 | TCONS_00051382-exon-scaffold_201-1575043694:332236..332599 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:333687..333810 | TCONS_00051382-exon-scaffold_201-1491911889:333687..333810 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:333687..333810 | TCONS_00051382-exon-scaffold_201-1510915933:333687..333810 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:333687..333810 | TCONS_00051382-exon-scaffold_201-1575043694:333687..333810 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:333976..334069 | TCONS_00051382-exon-scaffold_201-1491911889:333976..334069 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:333976..334069 | TCONS_00051382-exon-scaffold_201-1510915933:333976..334069 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:333976..334069 | TCONS_00051382-exon-scaffold_201-1575043694:333976..334069 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:334790..334973 | TCONS_00051382-exon-scaffold_201-1491911889:334790..334973 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:334790..334973 | TCONS_00051382-exon-scaffold_201-1510915933:334790..334973 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:334790..334973 | TCONS_00051382-exon-scaffold_201-1575043694:334790..334973 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:336025..336155 | TCONS_00051382-exon-scaffold_201-1491911889:336025..336155 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:336025..336155 | TCONS_00051382-exon-scaffold_201-1510915933:336025..336155 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:336025..336155 | TCONS_00051382-exon-scaffold_201-1575043694:336025..336155 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:336778..336952 | TCONS_00051382-exon-scaffold_201-1491911889:336778..336952 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:336778..336952 | TCONS_00051382-exon-scaffold_201-1510915933:336778..336952 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:336778..336952 | TCONS_00051382-exon-scaffold_201-1575043694:336778..336952 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1491911889:343188..343922 | TCONS_00051382-exon-scaffold_201-1491911889:343188..343922 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1510915933:343188..343922 | TCONS_00051382-exon-scaffold_201-1510915933:343188..343922 | Clytia hemisphaerica | exon |
TCONS_00051382-exon-scaffold_201-1575043694:343188..343922 | TCONS_00051382-exon-scaffold_201-1575043694:343188..343922 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_201 | supercontig | scaffold_201:332236..343922 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0005524 | ATP binding |
GO:0003777 | microtubule motor activity |
GO:0008017 | microtubule binding |
Vocabulary: Biological Process
Term | Definition |
GO:0007018 | microtubule-based movement |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0007018 |
microtubule-based movement |
molecular_function |
GO:0005524 |
ATP binding |
molecular_function |
GO:0008017 |
microtubule binding |
molecular_function |
GO:0003777 |
microtubule motor activity |
Blast
BLAST of TCONS_00051382 vs. Swiss-Prot (Human)
Match: KIFC3 (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4) HSP 1 Score: 110.538 bits (275), Expect = 4.295e-25 Identity = 103/375 (27.47%), Postives = 170/375 (45.33%), Query Frame = 2
Query: 278 VVRIKPLG-AGGGGVETSSATGKSIIDFSKDHVSVRDRKKYSYPSMIIPPRMKQDELFDN---FMPKCIDDFFQGYNVNVIAYGQTGTGKTHTMFGPPGCMKRAARGEYSYETHQTYGLFPRGILEIFRKVHECNTTESQSSSSNIYALTCSAVELCHMGNEDMFNKSEKRDYSF---ANGSGSLGIILNRDEKPPRLYGQNEYEIKTYDDILRVFA-AIASRNTEGTLLNDTSSRSHCLVALKLWRYDVSTKMVFKTRFQFCDLAGSEKLDKAHSDTSMKLPNGEWNHLAIMGMSTNFSYTELQRCLNDIAIQKKQNRKFNFRAYVTDLLFLLSGSLVGNAITALFVCVSQAESNKAESNYALDFGEKFSKLDM 1378
+ R++P+ G G E ++A D S H+ + + + P+ Q ++F + CID G+NV + AYGQTG GKT+TM G T + G+ R + +F +V E +S Y +T SA E+ + D+ K + +GSG L + G E+++++ DDI +VF +R TE T LN+ SSRSH L+ + + D ST + + DLAGSE++ K+ ++ S E H+ N S + L D+ I ++R+ + + L +LL SL G++ T + V VS E N +E+ Y+L F E+ +++
Sbjct: 449 IARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCID----GFNVCIFAYGQTGAGKTYTMEG----------------TAENPGINQRALQLLFSEVQE-------KASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYV-----------PGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLR---EAQHI-------NKSLS----ALGDV-IAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVEL 770
The following BLAST results are available for this feature:
|