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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051330 ID=TCONS_00051330|Name=TCONS_00051330|organism=Clytia hemisphaerica|type=transcript|length=1991bpRun BLAST on NCBI transcript from alignment at scaffold_200:141402..156351- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00051330 ID=TCONS_00051330|Name=TCONS_00051330|organism=Clytia hemisphaerica|type=transcript|length=14950bp|location=Sequence derived from alignment at scaffold_200:141402..156351- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00051330 vs. Swiss-Prot (Human)
Match: BZW2 (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1) HSP 1 Score: 427.943 bits (1099), Expect = 3.853e-143 Identity = 199/406 (49.01%), Postives = 287/406 (70.69%), Query Frame = 1
Query: 448 KTQKPTLTGQRIKTRKRDEKEKYDPSSFRDQIVAGLNEVNADLELASKFLIQSGSKLDFRRYAEALLDILITGGILAPGGTIVTDN--AAISSICVFNTEQDVDNMRNVIQLFERMIRQYKYLEKSLDDEMKKILMFLKGFTDVQRDRLTLATYLLISSSLIQPTCLIQILNDHLVNEGIALEFARCFFSAWLAEKDAPGLINILKKAEMDGKLMMLFPVHKRSIETFENYFNEADLKPIVDFQRNQNARIVTKEMKSRIKRLLEDESTAEEITSYMQETCEKNKIENLDIIPLLWSSLMKGVEWNKKEDLLAEQILRHLKTYASVLQRFTTTPATELLLLQKIQEFCYDNMSFLKLFQKIVMLLYKVDVIGEDTIIKWFKSGHSSKGKSVFLAQMEKMVEWLQSA 1659
K QKP LTGQR KTRKRDEKEK++P+ FRD +V GLNE DLE +KFL +GS+LD+RRYA+ L DIL+ G +LAPGGT + D +++ CVF+ +D + +RN Q+F ++IR+YKYLEK+ +DEMKK+L+FLK F++ ++ +L + + +L+ + + T L + D LV EGIA FA F AW+AEKDA + + L+KA +D +L+ LFPV+++S++ F YF +A LK + DF R Q + KE++ ++ L E +E+ Y++E ++N + +I LLW+ +M VEWNKKE+L+AEQ L+HLK YA +L F++ +EL+LLQK+QE+CYDN+ F+K FQKIV+L YK DV+ E+ I+KW+K H +KGKSVFL QM+K VEWLQ+A
Sbjct: 3 KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGIAASFAVKLFKAWMAEKDANSVTSSLRKANLDKRLLELFPVNRQSVDHFAKYFTDAGLKELSDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWNKKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAILKWYKEAHVAKGKSVFLDQMKKFVEWLQNA 408 The following BLAST results are available for this feature:
BLAST of TCONS_00051330 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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