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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000466:132948..140582+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00135062 ID=BlTCONS00135062|Name=BlTCONS00135062|organism=Branchiostoma lanceolatum|type=mRNA|length=7635bp|location=Sequence derived from alignment at Sc0000466:132948..140582+ (Branchiostoma lanceolatum)
GACTAGGGATTGTTTATCCACGACGCAGGGTACAAAGGTGAAAGTGGGCT
TGCCGTTCTAATGTTTAGGTGTCGCTTGAATAAATGGTAAGGATTGCACT
CTTTTTTAATAACCATACTTTGTATGTTGCTGGAAAGATTTCGTGCGCTG
TTTATAAGTGATTCTTGTCTACATGTAAAATGTATGATACCATTCGAAAC
TAAGGGGTTTTCCGTTCTAGTTCTGTTTTTCATCCCCGAATTGTTTTCGG
TTACAATGACGATTTCAATACCGCTCGCTCTAGTGGAACACATTATAGAC
CATCCGTCGTTAAACATGGTTTCCTGTATATTCCATGACGTGAAACTACC
AGTAATAATACCGGTCTGTCACACACTCTGCACAGGGAACATTCAACATG
GCGTCGCAACAGGTGTTTTTGGTGGGCGTGGCGCTGACCTTTGTCCTCGG
TAACGTCAGTGCTGTGGGAGGTCTGGAGACAAGTGAAAATCCACCCCCTG
TGGAACACGGTGCCCCATTGGACAAGACAGACACGGGGTTACAGTGGAAG
CAGCTCGAAGCACAGAACAACCATGGTCGTGAAAGAGACGTACTTATCAG
GACTGGAGACGGCGTTAAAAGTGGACACGAGCCTATGGAAACCACCACGT
TTGATGACGACTGCCCCAAGGGGTGCTCATGTAGCTTTTCAACCGTTACC
TGCTTTGGCACCCTGGACTCGATCCCACCAAAGTTTCCACCAGACACCAC
CCGTTTAGTTCTTTACTACAACAACTTCACCAGCGTCCCATCGAATGCTT
TTCCCAACCTGGACAAGCTTGAGTATCTGATGATGCCCTTTGGGAAAGTG
GGGTTTATTGAAAATGGCGCCTTCAGTGGTTTGGGCTCCGTGATTTTGCT
CAATTTGAGCACGAACTCCATCGATTCCCTCATTAGCACTGCCTTCACGG
GACTGGAAAACCTGCAGTCGCTCGACCTGGTCTCCAACAAAATAGACTCC
TTTGCTGACGGAGCATTCGAACCGCTGAAAAAACTGAAGTTCCTACTGAT
TACGCCCGTATCCTCCCAGTATCCGTATAACGCCTTCAACAGTTTGGTCA
ACCTCGAAACCTTATACGTCCAGGATGGCAGATTTGCCGCAGTTCCGGGT
TACGCCTTCTCGAGGATGAAGAAGTTATCAATGCTGATCATAGCAGACAA
CCCGAACCTGACTACCATCCATCCAGACGCATTCGCACCCGGCACGCTGA
ATGAGTCACTGACAAGCATAGACCTCAACCATTGTAACCTTCGCGAGATC
CCGTCACAAATGTTCCGCTATGTTCAGTCCCTTCGCTCGTTCACCGTGTC
TAACAATCCGATCGGCCAGGTCGATGACAACGCATTTGCTGACCTGCCAA
ATCTGCAGTATCTCAACTTGCAGGGACTCGGGTTGGCGGTTCTACCCAAA
GGGGCCTTCAATGGCCTCGACAGTATTCAGAGTATCTACATGGACACTAA
CAACCTTGTTACTCTCACGCCGGACCATTTCAGTAGTCATGTCAACACGC
TGAAGACCATGACTTTGTCCGATAACCCATGGCATTGTGACTGTGACCTG
TGGCGCTTCAACAGATGGCTGCACACCGAGACTAACATCACCGTGTACCA
GTCACTGATATGCGCGAGCCCCGAGCAACTCAAGGGCCAGCAACTCGACA
AGATCACTGCAACTCAGGCAGGGTGTCCCTAGGGTCCAGGCAAATAAACT
TGCAGTGGACCCGCACTGTATCGGACCAAAACTTTGGAACTCACTAATAA
GCGTTCAATGGCTCGTTTACTTTTGCATAGATACCATGTATTAACATGAA
AAAAATGAGACATTGATCAAAGCATATCATCATACTATAGCGGCAAAATT
TGGTTGTCTTCTCGTGATTGAACACTGTCACTAGTCACTACAATCATTTA
CATATCGATATCTGCAAGTACAGTGTGATGCATATTTTAACATTTATCTA
TGAATATCGTGGAACTCTAGCACAGAAGACGCATGATCTGTAGCATGTAG
TAGTGAGTGATTTGTAAAAGAAAACTTACTCGACTGTAACTTGCGTAGTT
TGGTTTGCTGAAAGAACGCTATAGGTAGAGACACTGCTACTCACTCTGAG
ATACTGGGAAATGTTGTTGGTTGTGAACGATACGACAGTATTTAGATTTT
TGGTCGATTTTGGTCGAATCCTGTAACCTTCTTAGAGACTAATCAATGTG
AAGCGTCGAGTTTTTGGTTTACATATTTGAAAAAAAAAAGGCTTGTTTAT
ATTATTACCTTACCAAGATAACTTCCAACAGTAAACCAACTTATCTATTG
TAAAGTTACATCAAAACAAAAAAATACGGCGTGCTTATGAATATGACTTG
TCCCCCTCTCGTCATCGGATATGAAGTAACGATGTTGTAAGTAATTTCAT
CGTGCCTTCCGCTAACTGAAACCATACCCTTTTGTGACCAGTGACCTTGT
CATGGACCAAAGTTCAAAGTTCACATCTAACTGTGCCTCCTCACCTGAGG
CGAACAGGTGTACGTGGTCATGGCGGAGGCCATACTCAGTCAGATTTCGG
GAGACTTTCTGGAGTGTACGATCTGCCTGGAGCCCTTTAAGGACCCCAAG
GTCCTGCCGTGTCTTCACACCTTCTGTACGGGCTGTCTGGAGAAGTTTCT
AGAGAAGCAAGGTGAAGTGAAGGACAAGTTTCCGTGTCCGACATGTCGGA
CCGAAACTGTACTTCCGCGAGGCGGTGTCGTCGGGCTCAAAAACAACTTC
TTTGTCCTGAGCTTGAGGGACACCGTTCAGGCTCACAAGAGAGTAGATAG
TAAGGAGAATGACAAAGTATTTTGTGATCTGTGCGAAGAAGAAGTGGCTA
CATGCGGCTGTGTTGTCTGTGAAGAGTTCATGTGTGACGAATGTGCCCGA
GGCCACCGTCGTGTCAAACGTACACGTGATCACGAAGTCGTCGGCGTGGC
GGAGTTTAAGGATCAGCTTATCACAAAAGCACCTTCGGTCAAGACGACAT
CTCTGCCAATGTGCCAGAAACATCAAGACGAGAAGCTCAAGTTCTACTGT
GAGACGTGTCAGCAACCCATCTGCCGAGACTGCACGGTACTGCAGCACAA
AGATCACAAGTACGGCTTGCTGGCAGACGTTGTGAGTGACGTCAGAACAA
AAATCAAAGACAAACTGGCAAGTGCAAGGCCGAAAATTGAGGAATACCAG
TATGTCACAAACGTCGTAGCTGAGAAGCAGACTGAACTGGACAACAGAAG
TAAGAAAGTCGCAGACGACATCGATGCAGCTGCGGAGAAAGAGATCAAGT
ATCACAATGGTCTTGTCAGACGCAAACAGACTGAATTGAAAGAAAAGTTA
ACGGCCGTCACAGTAGCCCGTTCCAAGCAGCTCTCTGCTACAGCAGACAG
TGTTGAGAGCACCTTAGGCTGTCTGTCCAGCACAGTGGACTTCTCACAGA
AAGTCGTGGAGCATGGCAGTGACTTTGACGTCATGAACGTGTACTCTGAC
GTCACCGCCCGACTAGAGTCTCTGCTGAAAGGTCCAACCCCGGACATTCC
TGACGACATCAGTTAAGTCATATTTGATCCCAGGACAGAAAGGAAAGAAA
CAGAAATCATTCTTGGAAATATTGTCGGTACGTTGTTCAGTATTATTGTT
TTACTTTATTTTAAAACTATGTATAAAAGAGAGCTCTATGGTGTTTGAAT
TTCAGTGATCTCTTATGTATATATTTTGTTTTCTTGAATTAACTATTGAT
ATGATTTCACATTGATATGCAAATTCAAATCCTGATTTCTACTTGATCTT
ATTTCATTGTGTTTCGTTATTAGTATTATGTCAAGGTTTTTATTTGGCTT
ATGTTATCATGTTTTTGTTATCTAGTTATTTTATGTTATCTAATTTTATG
TAACAAATTTGTTTGGGGTTTTCCCCCAGGACTCTTTGAAAAACGCCTGC
TGGCGACAAGAATTCCCCTGGCGAAATAAAAATAAACAAACAAACAAACA
AACTTGTTCTATTGACCTATTTGTGGAGTGACCATTTGTATGTTGTAAAA
CCCTCGCCGCAAGGAAAACGACAACTCAGTTAGATGAAGAGAGCACCCAG
ACAGACATACATTCGGACATCAGCCTCTCCACGTGTTGATGGGTGATAGC
TGCACACGCAAAGGGATTAATTCCCTTTATGTGGGACCTACTTTTCAACC
GTTAAACTTGAGAATTGAGATATGAAGATGGGAACTGGTGTTAATCCTTT
GATGTACTAACTTGAGCTTTTGGTAAGTTGTTAAACCTGGACCAAGGTTC
TTGAATATCTGATGAATACTGTGATGCTACTGTAACAATAACTATTGGTT
GTCTCCTCAGATTCCTTCTTCCGCACGGCCAAGTTCACCACCCTGGGCAC
CACCGGCCGTCTGGGCCCCACTGCCCTGGGTAACCACTACAGGGGACAGG
ACCATGAACACCTGGTGACGCTACATGACGGGATACAACACTTCACTGTA
CCGTGGACGGGAACGTACAGCATAGAGGCAGCGGGTAGGGGCCGCTTATT
CATTGGCAAATGTAAAGGAATCCCGGATTGAAATATGTCTGTTGCCCTTA
ATGTAGCACCCAGCGGTGATTGAATGTTTGAAGAAATTCGAGACAATCTA
AAGAAATCAGATTTTGGGTGAAAAGTCATACAATGAAATCTGTCTTATCT
AGTAGCTGTAGTCTCATCTGATGGTACCTATTGTCATCTCCTGATCTCTG
GACTGAAAGTGATTGACATGTTTGATTGACAGGTGCTGCTGCCGGGTGGG
GTGTAGAGAACCGGAAGTCCGCCCGAGGACGGGGTGCCGTACTGAGGGGA
ACATTTAACCTCAAACAAGGTTCGATGTCTAAATTGTAGTACATGTACTT
TAGTCCCTTTGGGTCTATTGATGTGAAATAAATCGCAGATGAGTAAACAC
CATACATTATTTCAATAACTGAGTGCATGTTACATTGTTGACTTTACAAA
TCCATGAATCTAAGAGGTGTGTGTGTGTGTTTGTGCTGCGTACACAGAAA
GAAAAAGATGAATTAACCTCCAGCTTTCATTCTAAAATAAATGTTGTTAA
AGTTATTTGTCTAAAGGTTTCAAGACAGATTATAATGTAATAATGGATAC
TTAATGTCATGTTGTTTTCCTAACTCTGCAGGTGAAACACGTAATATCCT
GGTGGGACAAGAAGGTACTGAGAACATGGATTATGCCAGTGTAGGAGGAG
GGGGCGGTACGTTTGTCACCAGGAGAGACGACACGCCACTCATTATTGCT
GGGGGTGGGGGAGGGGCAGGGTATGGGCTACAGACCCATAATCCCCTGTG
TGACGGGACTGTGTCCACTACTGGTAACAAGAGTTATGGAGGAACAGGTT
GTAGTGGAGGATCTGACGGACAGGGGGCGACAGAGGGGGAGGATAACTAC
ATGGGTGGGGGAGGGGGAGGGCTGCTGACGGATGGAGGGGGTTCTAAACA
GTTTGGAGGCGACAGTTGTGAGAATGGTGGTGAAGGTGGGAAGGCGTTTG
TGAATGGAGGGGTTGGAGGGCGTGGGGAATGTAATAATGCTGACGGTGGG
TTCGGCGGAGGGGGAGGGGGTTATGGGTCCGGTGGTGGAGGAGGTGGGGG
AGGGGGGTACTCAGGGGGCGGCAAGGGAGAGCATCGTTACCCATTTGGAA
GGGGAGGAGGAGGCGGTGGTTCGTTTAACTCGGGTACTGACACCAGCGGT
CAGGATGGGGCAAACGACGCGCCCGGGTATGTGGTCATCACCAGACAGGG
GTAGACATTGTAAGGTAACACTTGTCACCATCTTTAGAGGAATGTAAATC
AATCCCATGTTATATTTCAATTAGGAATGCTACCCTTAGGGCAATTTGAT
AAGCTTCTTTCGAAGGATGTTTACACTAAGTCGTAGAATATGTGAATCAG
AGAGCCCTGAGGAATATCTAATAGAGTACCAGAATAGATATTCCAGTATC
ATAATTCGAGGTACCAGAAGAGAAACAACAGTTTCTACTATGGAGATGTT
CATTGTCACTGAGTCAGTCCTAAACAGATGTGAAAAGTCCTAAACTCGTA
CATGTATAACTAAATGACGCACCTCGTGCTCATTTTGTGGGCTATAGGAA
GTAAGGAATTGTATCAAAGAATGAACGCTTGTAATTACTGTTCTTGACTT
ATCAAAGAAATACAAAAATTCCACCAATCTTCCCTAGTCCATCACTTTAT
GGCACCCTCTCAATGACTTGGGTTAACAAATGAAAATATACACTTTATTT
TCCAGCTTCTCCTTTAAGATTACCATCTTCTAACTTTTCATCAACTTTTT
GTAGACTCAAGTGCAGACGTATGTCAATCTCAACACTTATGGCCAAGCAC
TCGTTAATGTCGACTTCTCTTTGTCCCTCTGATGTCAAATTGGGAACCCC
TGCAGGCGGTGTGAACCATTGGAATGCCCTTCAGTACCAAGGAGGTGTAG
GGCGTAATTTAAAAAAAAACAGCCATCAATCTGAATTGTTGCACAAAAAA
CAGTTGCTGAAATTTGTCCAACCATCTTACATGTTCAGACAAGCTTGACG
CAGAAGTTCTAAAAAGATCATTACAGTCCAGTTAAAACTGATAAACAGAT
GACATACACATGTGTAATTGTAAGTTGACAAACCAACTGACCTTTCCATT
GTTAAAGAGGAACTATAACAGATGTAAACACCTTTAAGGCTTTATGAAAT
TTAAGAAATAACAATCTGTAGTTCTGAACCCACCTTGACAACAACATAGT
CACCTCCGTGAATAGTTTCATCCGGTTAGTAAGTCACTTGATAAAAAGTT
TGAATAAATCTCTTGGTTCTGTAAAAATATTCTTTTTATTCAACAGTCAC
CTGCCTTCATTGGCGAGCACTTCTGACCTCCGACCTCATGACACTGATCC
AGGCAAACTTGCAGTGGACCGAAGTTTGGCACCTTCTAATAAAAGCGTAC
AAGAGCACGTTTCTTTTCCTACGTGTAATGATGATGTGATACACAAACGA
ATTGTACTTTCATGTCACATAAAGGGGCAAAAAATCCCATTTCAATTATT
CTTACAATCATATCGCTGCAATAAGGCAAATCACATTGTACAAAAAGCAC
CTGTCTTCACTGCATTGTCAATTACAACAATATGATCTTCAACATGAAGG
ATACCAGCTCGAACTCTCAATTCAAATCATCATTACTTAAAATGTATAAG
GGGAAATCGTCAGTTTCCCACCACTTGTATCTTAACTTGAAATGAAATTA
TCNGATTATAATGTAATAATGGATACTTAATGTCATGTTGTTTTCCTAAC
TCTGCAGGTGAAACACGTAATATCCTGGTGGGACAAGAAGGTACTGAGAA
CATGGATTATGCCAGTGTAGGAGGAGGGGGCGGTACGTTTGTCACCAGGA
GAGACGACACGCCACTCATTATTGCTGGGGGTGGGGGAGGGGCAGGGTAT
GGGCTACAGACCCATAATCCCCTGTGTGACGGGACTGTGTCCACTACTGG
TAACAAGAGTTATGGAGGAACAGGTTGTAGTGGAG Coding sequence (CDS) from alignment at Sc0000466:132948..140582+ >BlTCONS00135062 ID=BlTCONS00135062|Name=BlTCONS00135062|organism=Branchiostoma lanceolatum|type=CDS|length=1350bp|location=Sequence derived from alignment at Sc0000466:132948..140582+ (Branchiostoma lanceolatum)
ATGGGAACATTCAACATGGCGTCGCAACAGGTGTTTTTGGTGGGCGTGGC
GCTGACCTTTGTCCTCGGTAACGTCAGTGCTGTGGGAGGTCTGGAGACAA
GTGAAAATCCACCCCCTGTGGAACACGGTGCCCCATTGGACAAGACAGAC
ACGGGGTTACAGTGGAAGCAGCTCGAAGCACAGAACAACCATGGTCGTGA
AAGAGACGTACTTATCAGGACTGGAGACGGCGTTAAAAGTGGACACGAGC
CTATGGAAACCACCACGTTTGATGACGACTGCCCCAAGGGGTGCTCATGT
AGCTTTTCAACCGTTACCTGCTTTGGCACCCTGGACTCGATCCCACCAAA
GTTTCCACCAGACACCACCCGTTTAGTTCTTTACTACAACAACTTCACCA
GCGTCCCATCGAATGCTTTTCCCAACCTGGACAAGCTTGAGTATCTGATG
ATGCCCTTTGGGAAAGTGGGGTTTATTGAAAATGGCGCCTTCAGTGGTTT
GGGCTCCGTGATTTTGCTCAATTTGAGCACGAACTCCATCGATTCCCTCA
TTAGCACTGCCTTCACGGGACTGGAAAACCTGCAGTCGCTCGACCTGGTC
TCCAACAAAATAGACTCCTTTGCTGACGGAGCATTCGAACCGCTGAAAAA
ACTGAAGTTCCTACTGATTACGCCCGTATCCTCCCAGTATCCGTATAACG
CCTTCAACAGTTTGGTCAACCTCGAAACCTTATACGTCCAGGATGGCAGA
TTTGCCGCAGTTCCGGGTTACGCCTTCTCGAGGATGAAGAAGTTATCAAT
GCTGATCATAGCAGACAACCCGAACCTGACTACCATCCATCCAGACGCAT
TCGCACCCGGCACGCTGAATGAGTCACTGACAAGCATAGACCTCAACCAT
TGTAACCTTCGCGAGATCCCGTCACAAATGTTCCGCTATGTTCAGTCCCT
TCGCTCGTTCACCGTGTCTAACAATCCGATCGGCCAGGTCGATGACAACG
CATTTGCTGACCTGCCAAATCTGCAGTATCTCAACTTGCAGGGACTCGGG
TTGGCGGTTCTACCCAAAGGGGCCTTCAATGGCCTCGACAGTATTCAGAG
TATCTACATGGACACTAACAACCTTGTTACTCTCACGCCGGACCATTTCA
GTAGTCATGTCAACACGCTGAAGACCATGACTTTGTCCGATAACCCATGG
CATTGTGACTGTGACCTGTGGCGCTTCAACAGATGGCTGCACACCGAGAC
TAACATCACCGTGTACCAGTCACTGATATGCGCGAGCCCCGAGCAACTCA
AGGGCCAGCAACTCGACAAGATCACTGCAACTCAGGCAGGGTGTCCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00135062-exon-Sc0000466-1564993656:132948..133033 | BlTCONS00135062-exon-Sc0000466-1564993656:132948..133033 | Branchiostoma lanceolatum | exon |
| BlTCONS00135062-exon-Sc0000466-1564993656:133333..136624 | BlTCONS00135062-exon-Sc0000466-1564993656:133333..136624 | Branchiostoma lanceolatum | exon |
| BlTCONS00135062-exon-Sc0000466-1564993656:137358..137531 | BlTCONS00135062-exon-Sc0000466-1564993656:137358..137531 | Branchiostoma lanceolatum | exon |
| BlTCONS00135062-exon-Sc0000466-1564993656:137780..137866 | BlTCONS00135062-exon-Sc0000466-1564993656:137780..137866 | Branchiostoma lanceolatum | exon |
| BlTCONS00135062-exon-Sc0000466-1564993656:138179..138211 | BlTCONS00135062-exon-Sc0000466-1564993656:138179..138211 | Branchiostoma lanceolatum | exon |
| BlTCONS00135062-exon-Sc0000466-1564993656:140388..140582 | BlTCONS00135062-exon-Sc0000466-1564993656:140388..140582 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000466 | genome | Sc0000466:132948..140582 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF067318 |
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