TCONS_00050892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050892
Unique NameTCONS_00050892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050892 ID=TCONS_00050892|Name=TCONS_00050892|organism=Clytia hemisphaerica|type=transcript|length=1136bp
aaaagtctcaAAATATTAACAGATTCGCTATAAAAGTAGGGacgttttaa
ttttttctggtAGTAAAATTTGACTTTGACGGAGAGTACTATTATTCCAA
AATGGAGATCTTATATTTATCACTTTTTGCAAGTCTAATCGTCGTATTCT
CAGAAGCAATAGAAACATCACTCACTCCCGGAGAAGTTGAAATATGTACT
GGTGCACATAACAAGCTCCGACGGCTGCACAAGAACACACCTAGCTTGGA
ATGGGATGACTCGTTAGCCGCTGCGGCACAAAGATACGCCGAAAAGCTAG
TGGAAATAAATCGAAAATCATCGACCAATCAGTTGATTCATGAACACCCA
ACGCATGGCATGGGAGAGAACTTATATTGGCAGGATAACAGGAAGAAAGG
AACATGCGCTGATGCTAGTCTAGCTTGGTATAATGAGATTAACGACTACA
GCTACGCACTTGGTGATACTAAGAATGGAATGCCAGTCGGTCATTTTACT
CAATTAGTATGgaagaaaactttgaaattcGGTGTAGGTATCGCTACAAT
GAAATCACGAAAATACAGTGAATACGGTAACACTGAGACGTTTATAGTGG
CCAAATATTCACCGAAAGGCAATTTTTATATGACTGGCAAGAAATTGAGG
GATTATACTGCTAACGTTCAACCAAGAAAAGCCGGATCTGTCACACCAAC
GGTTGAGGAACTGGACCCGACTTTAAAACAAGCATGTGAAAACGGTTATG
GAGATGGTCAATGCCATGACTTTTTGAATGATTGGGGTTACACATGTCAT
GGAGATGAATTTGAAagttatttcaaagaaaattgtTACAAAGCTTGTGG
ATATTGTTAAAATAGACATACATTTAGCCTGTAACATTTTATTGGCTATA
ATACTCTTATAAGAACCTAATAAAAGGCTCCCGCTTTTTGTGTTTGTGTG
CCTATTTTGATCTATAATTACCTTTATACGTTTGAGGTATTTAAAGGTAC
AATATCCAACCCTTCCCGGCAATTAGGATCCCCTacgtttattaaaatta
gaaGCTTTTTCCAACCTTTCCCCTTTCATTAGGCATCTGAGAGTACACCA
GGCCTGAAAAATAGTTTTTAGAGAAAAGCTTATTTT
Run BLAST on NCBI

protein sequence of TCONS_00050892-protein

>TCONS_00050892-protein ID=TCONS_00050892-protein|Name=TCONS_00050892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
MEILYLSLFASLIVVFSEAIETSLTPGEVEICTGAHNKLRRLHKNTPSLE
WDDSLAAAAQRYAEKLVEINRKSSTNQLIHEHPTHGMGENLYWQDNRKKG
TCADASLAWYNEINDYSYALGDTKNGMPVGHFTQLVWKKTLKFGVGIATM
KSRKYSEYGNTETFIVAKYSPKGNFYMTGKKLRDYTANVQPRKAGSVTPT
VEELDPTLKQACENGYGDGQCHDFLNDWGYTCHGDEFESYFKENCYKACG
YC
Run BLAST on NCBI

transcript from alignment at scaffold_19:730853..735845+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050892 ID=TCONS_00050892|Name=TCONS_00050892|organism=Clytia hemisphaerica|type=transcript|length=4993bp|location=Sequence derived from alignment at scaffold_19:730853..735845+ (Clytia hemisphaerica)
aaaagtctcaAAATATTAACAGATTCGCTATAAAAGTAGGGacgttttaa
ttttttctggtAGTAAAATTTGACTTTGACGGAGAGTACTATTATTCCAA
AATGGAGATCTTATATTTATCACTTTTTGCAAGTCTAATCGTCGTATTCT
CAGGTTTGTAGTTAAGATAagatttacacgtttttttaagcagaacatcc
aaaatttttgaagccttcggatgttcttaagatttttagtcttaaaccta
aaaatgttcctaaaatgttcttaagtccagcattttttgtgtatttttat
caattttcctgAGAAAACAGGTGTTTTAGGGTCAACAAAGCcctaagatg
ttcttaacttgttctcaatattttggccatcgtagctttatgttcttaat
ttgttctcataaaaagcGTGCAGTGGATTATGTTGAATTTAATACTTTTA
ATTACGAGGGCGGACTTATTATCTTATTTTTGAACTTGGTGGGGAACGGT
ACATAGGGGTTTTACCaattaaatagctttaaagcgTCCCCGAAATTTAT
AGTTTTATTTTTGCATAAGCGTTCCTGTTTCAGAACAGATACATATTtaa
tatcaggacagtgtctgtctattgttatattgtgctgaaataacagtgcc
gtagcaactgggggggcaagggggggggctatgccccccccccccccccc
gggccgcctttttttccccaaaaaaaaaaaaaaaacttttgattttgaaa
aaaaaccttttttaaaaaaatttggggggggggggggctgccCCCCCtgc
cccccccaataattttttcaaaaatggttattttgcaaaatgcaaagttt
ttcttttttaatttgtcataattgtcttttatgtgcatgtttttagtgtt
tttttaagcaatctagagctcaaattttcaaaatttcccccctcgggcca
aaccatggttggccctcacggtgtcactaaacttcagcccccccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNcccccccccaatatgaaaatgcttcctacggcac
tgaataagtcaaaaaatgtttttcttttcccctttctgaccaatcttgct
ccgcaTCCGTGCCAATGTGTAAAAGCTTATAAATTAAGATTGATGAGTaa
acaaacgatatcactcttatttaaaaacaaaatctttaattaaAAACCGG
GTGGTATATCCAATTTAATTAAATATCACATGCTAATGAACATGAGAATT
TTAATAATAAAAGTACAAACCAAAGTGTCCACCCGGAGAGTAAATTTTAC
GAAAAACTGAATATACATCTTACCAAAGCTGTATACCGCTTTACAAAAAG
GGCAGAAACTTACTTATATTTATTTGGTTAAATAACTTTTGGCGCACATT
TGTATTCTCCATGATGAACATTTTACGTATACAAATATTTGCAATTTTGC
TATTCGTACTCACAGGTTAGTAAAAAAGATCCATTTTGTTGGATTATAGA
GAGGGATTGGATCCTGTTAAGATGAAATTCCATATCTTTTTGGTACACGA
GGATTCTATCATTTTCGAAATTATATAGTTCATGAACTTTAAGATAGCAA
AACAGCTATAAGTTTGAGTATTCTATCCAGTGAAAACTCAAGTGTCATTT
TTTCCTGGTATGACGTTTAGGGTTATATTCTTACCGTGTGgaatttttga
ttgatttatttTCCCCAGTACACTAAATATTGGAGATAActcatttttcc
aattttttcttctcttaGAAGCAATAGAAACATCACTCACTCCCGGAGAA
GTTGGTAAGTGAAatatttacttatttttctttgcttaactTTCACACGA
CATTCACATGGTCCCCCATCTCCCGATTTCAGTATTTATTGAGTTCCTGG
CTATTTCCAGATTCAACGATGATAGTGGGGTCCGGGGACGAATTCTTATC
TTGCAAAAATGTTTAGAAATCTTCTGTCTGAAGATATTTATGAGTGAAGG
TAGTCTATCGCCGTATTTCCCTAATTTTTGTTGACGTTGagtctacaatc
atggtcgaaatctattgataattaagcttatttcctcgtttttcgaaatt
tggagttcgggcgtgAAAGtggattttgggccatctctcaaatttaatcg
gatatttcaatttggctcgggtttataaacctccaggctatattatgagc
cttattggaccatttaagtcttaagtctcaagttaaaaactcagagttaa
aactctacctactttagagcacttttgcttctttttttttttggattgtg
gtttcaaaacttcccggtggatttcccatttttctcaaatattacaacca
tgattgtagtgaGGTAAGCTAAGAGCTCTGTGAAAATTTTGGTGCCATAG
CTAAACCTGTCCAAATGGTTTGGTTACTAGACGTCGCCTGCGTTTTATAT
ACGCAAGTgaacggaatgaaaaatcccggtttttggttaAGTTCTCGGTA
AAAGCCACCCTGGTaaccattttgaaattctattaATATTGCATCTCCAG
AAATATGTACTGGTGCACATAACAAGCTCCGACGGCTGCACAAGAACACA
CCTAGCTTGGAATGGGATGACTCGTTAGCCGCTGCGGCACAAAGATACGC
CGAAAAGCTAGTGGAAATAAATCGAAAATCATCGACCAATCAGTTGATTC
ATGAACACCCAACGCATGGCATGGGAGAGAACTTATATTGGCAGGATAAC
AGGAAGAAAGGAACATGCGCTGATGCTAGTCTAGCTTGGTAAGAATCCAA
TATATTTGACCAATTTAGTCCGAGACCGGTCTAGGTTGACGACTCTGACT
CAGTAAAGGATGAATCAAATCGGTGTGTGTTCCATTGCAGCACCTACTAC
TACTGAAACCACATTGTCCACATTCTACCACCCAAATTATTTACTTAATC
ATTTTTCACATGTCAGGTATAATGAGATTAACGACTACAGCTACGCACTT
GGTGATACTAAGAATGGAATGCCAGTCGGTCATTTTACTCAATTAGTATG
gaagaaaactttgaaattcGGTGTAGGTAAGGACCactatttcaatgatt
tttataataaaaaaatctcTGTACTCAAACTCCTCgtacatgcttttttt
tataagaactttataagaatgtctatgatgaaaatggccaaaaaattaag
aatatggtaagaatatcaccatcatggaatttagcaactgaacctaagaa
tgccattttaaatgCNgtaagaatatcaccatcatggaatttagcaactg
aacctaagaatcccattttaaatgcattttaacctgcaGATTTCCAATTT
CGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCAATTTCGATcgtaacctaagaataccgtaagaatatttgtggat
gattttcgccaaaaagttaagaatatccatgatgaaatgaaaaaacacca
tttttattaaaaaaaaagcgtgtaacctTGGAGACGGAGAGCCATTGCGA
ATATTAGAAGAGACGAGTTAGCTCACACTATTGACCACTTAGCAATATAT
CCAAGTTCcaagaaaacattcaaaatttttaaagcttttgtgttgagtta
aaaatgttaaaaatgttctcaaattgttcttaatcttttgtAAGAATCTT
TCGTGTTTAGATTCCATAGTGCATGAAGCCTGAGCATGCTATTAATATTT
CCGACATTATGCTcttttttatagtttgttcttataaaaaaagctacTCT
CTTTCTTTTCAGGTATCGCTACAATGAAATCACGAAAATACAGTGAATAC
GGTAACACTGAGACGTTTATAGTGGCCAAATATTCACCGAAAGGCAATTT
TTATATGACTGGCAAGAAATTGAGGGATTATACTGCTAACGTTCAACCAA
GAAAAGCCGGATGTGAGTTAAAGTTTATCTTGAAAGTTATTtgatttcag
aaattttcgtgatttttgcgaaattaaatagTCATGAAAAAAATCGACCG
AAGTTgaatttccacaaaaaaaagatcaaaaatactttgataaaacgaga
aaaaaaaactaaatgaaAAACTAGGAAAACATTTAATCTATTCTCGTGAT
ATGCGAAATTGAATTCCGCGAAATACGAAAAATATggactaaaaataaaa
tatggaCTGACTCGCAAATTTTAATGGCTGCAAAAATTTCTGATATTAAA
gttatatttcttttattcctttttatttaaaataactctataattctatg
aatttcTAATGGCTAAATATGGGCCAATCCATAAAGTTTTATGTTGGGCT
TTCGTCTGttaacattttttaaaagcaacatttctaatttttagCTGTCA
CACCAACGGTTGAGGAACTGGACCCGACTTTAAAACAAGCATGTGAAAAC
GGTTATGGAGATGGTCAATGCCATGACTTTTTGAATGATTGGGGTTACAC
ATGTCATGGAGATGAATTTGAAagttatttcaaagaaaattgtTACAAAG
CTTGTGGATATTGTTAAAATAGACATACATTTAGCCTGTAACATTTTATT
GGCTATAATACTCTTATAAGAACCTAATAAAAGGCTCCCGCTTTTTGTGT
TTGTGTGCCTATTTTGATCTATAATTACCTTTATACGTTTGAGGTATTTA
AAGGTACAATATCCAACCCTTCCCGGCAATTAGGATCCCCTacgtttatt
aaaattagaaGCTTTTTCCAACCTTTCCCCTTTCATTAGGCATCTGAGAG
TACACCAGGCCTGAAAAATAGTTTTTAGAGAAAAGCTTATTTT

Coding sequence (CDS) from alignment at scaffold_19:730853..735845+

>TCONS_00050892 ID=TCONS_00050892|Name=TCONS_00050892|organism=Clytia hemisphaerica|type=CDS|length=4554bp|location=Sequence derived from alignment at scaffold_19:730853..735845+ (Clytia hemisphaerica)
ATGGAGATCTTATATTTATCACTTTTTGCAAGTCTAATCGTCGTATTCTC
AGAAGCAATAGAAACATCACTCACTCCCGGAGAAGTTGAAATATGTACTG
GTGCACATAACAAGCTCCGACGGCTGCACAAGAACACACCTAGCTTGGAA
TGGGATGACTCGTTAGCCGCTGCGGCACAAAGATACGCCGAAAAGCTAGT
GGAAATAAATCGAAAATCATCGACCAATCAGTTGATTCATGAACACCCAA
CGCATGGCATGGGAGAGAACTTATATTGGCAGGATAACAGGAAGAAAGGA
ACATGCGCTGATGCTAGTCTAGCTTGGTATAATGAGATTAACGACTACAG
CTACGCACTTGGTGATACTAAGAATGGAATGCCAGTCGGTCATTTTACTC
AATTAGTATGgaagaaaactttgaaattcGGTGTAGGTATCGCTACAATG
AAATCACGAAAATACAGTGAATACGGTAACACTGAGACGTTTATAGTGGC
CAAATATTCACCGAAAGGCAATTTTTATATGACTGGCAAGAAATTGAGGG
ATTATACTGCTAACGTTCAACCAAGAAAAGCCGGATCTGTCACACCAACG
GTTGAGGAACTGGACCCGACTTTAAAACAAGCATGTGAAAACGGTTATGG
AGATGGTCAATGCCATGACTTTTTGAATGATTGGGGTTACACATGTCATG
GAGATGAATTTGAAagttatttcaaagaaaattgtTACAAAGCTTGTGGA
TATTGTTAAATGGAGATCTTATATTTATCACTTTTTGCAAGTCTAATCGT
CGTATTCTCAGAAGCAATAGAAACATCACTCACTCCCGGAGAAGTTGAAA
TATGTACTGGTGCACATAACAAGCTCCGACGGCTGCACAAGAACACACCT
AGCTTGGAATGGGATGACTCGTTAGCCGCTGCGGCACAAAGATACGCCGA
AAAGCTAGTGGAAATAAATCGAAAATCATCGACCAATCAGTTGATTCATG
AACACCCAACGCATGGCATGGGAGAGAACTTATATTGGCAGGATAACAGG
AAGAAAGGAACATGCGCTGATGCTAGTCTAGCTTGGTATAATGAGATTAA
CGACTACAGCTACGCACTTGGTGATACTAAGAATGGAATGCCAGTCGGTC
ATTTTACTCAATTAGTATGgaagaaaactttgaaattcGGTGTAGGTATC
GCTACAATGAAATCACGAAAATACAGTGAATACGGTAACACTGAGACGTT
TATAGTGGCCAAATATTCACCGAAAGGCAATTTTTATATGACTGGCAAGA
AATTGAGGGATTATACTGCTAACGTTCAACCAAGAAAAGCCGGATCTGTC
ACACCAACGGTTGAGGAACTGGACCCGACTTTAAAACAAGCATGTGAAAA
CGGTTATGGAGATGGTCAATGCCATGACTTTTTGAATGATTGGGGTTACA
CATGTCATGGAGATGAATTTGAAagttatttcaaagaaaattgtTACAAA
GCTTGTGGATATTGTTAAATGGAGATCTTATATTTATCACTTTTTGCAAG
TCTAATCGTCGTATTCTCAGAAGCAATAGAAACATCACTCACTCCCGGAG
AAGTTGAAATATGTACTGGTGCACATAACAAGCTCCGACGGCTGCACAAG
AACACACCTAGCTTGGAATGGGATGACTCGTTAGCCGCTGCGGCACAAAG
ATACGCCGAAAAGCTAGTGGAAATAAATCGAAAATCATCGACCAATCAGT
TGATTCATGAACACCCAACGCATGGCATGGGAGAGAACTTATATTGGCAG
GATAACAGGAAGAAAGGAACATGCGCTGATGCTAGTCTAGCTTGGTATAA
TGAGATTAACGACTACAGCTACGCACTTGGTGATACTAAGAATGGAATGC
CAGTCGGTCATTTTACTCAATTAGTATGgaagaaaactttgaaattcGGT
GTAGGTATCGCTACAATGAAATCACGAAAATACAGTGAATACGGTAACAC
TGAGACGTTTATAGTGGCCAAATATTCACCGAAAGGCAATTTTTATATGA
CTGGCAAGAAATTGAGGGATTATACTGCTAACGTTCAACCAAGAAAAGCC
GGATCTGTCACACCAACGGTTGAGGAACTGGACCCGACTTTAAAACAAGC
ATGTGAAAACGGTTATGGAGATGGTCAATGCCATGACTTTTTGAATGATT
GGGGTTACACATGTCATGGAGATGAATTTGAAagttatttcaaagaaaat
tgtTACAAAGCTTGTGGATATTGTTAAATGGAGATCTTATATTTATCACT
TTTTGCAAGTCTAATCGTCGTATTCTCAGAAGCAATAGAAACATCACTCA
CTCCCGGAGAAGTTGAAATATGTACTGGTGCACATAACAAGCTCCGACGG
CTGCACAAGAACACACCTAGCTTGGAATGGGATGACTCGTTAGCCGCTGC
GGCACAAAGATACGCCGAAAAGCTAGTGGAAATAAATCGAAAATCATCGA
CCAATCAGTTGATTCATGAACACCCAACGCATGGCATGGGAGAGAACTTA
TATTGGCAGGATAACAGGAAGAAAGGAACATGCGCTGATGCTAGTCTAGC
TTGGTATAATGAGATTAACGACTACAGCTACGCACTTGGTGATACTAAGA
ATGGAATGCCAGTCGGTCATTTTACTCAATTAGTATGgaagaaaactttg
aaattcGGTGTAGGTATCGCTACAATGAAATCACGAAAATACAGTGAATA
CGGTAACACTGAGACGTTTATAGTGGCCAAATATTCACCGAAAGGCAATT
TTTATATGACTGGCAAGAAATTGAGGGATTATACTGCTAACGTTCAACCA
AGAAAAGCCGGATCTGTCACACCAACGGTTGAGGAACTGGACCCGACTTT
AAAACAAGCATGTGAAAACGGTTATGGAGATGGTCAATGCCATGACTTTT
TGAATGATTGGGGTTACACATGTCATGGAGATGAATTTGAAagttatttc
aaagaaaattgtTACAAAGCTTGTGGATATTGTTAAATGGAGATCTTATA
TTTATCACTTTTTGCAAGTCTAATCGTCGTATTCTCAGAAGCAATAGAAA
CATCACTCACTCCCGGAGAAGTTGAAATATGTACTGGTGCACATAACAAG
CTCCGACGGCTGCACAAGAACACACCTAGCTTGGAATGGGATGACTCGTT
AGCCGCTGCGGCACAAAGATACGCCGAAAAGCTAGTGGAAATAAATCGAA
AATCATCGACCAATCAGTTGATTCATGAACACCCAACGCATGGCATGGGA
GAGAACTTATATTGGCAGGATAACAGGAAGAAAGGAACATGCGCTGATGC
TAGTCTAGCTTGGTATAATGAGATTAACGACTACAGCTACGCACTTGGTG
ATACTAAGAATGGAATGCCAGTCGGTCATTTTACTCAATTAGTATGgaag
aaaactttgaaattcGGTGTAGGTATCGCTACAATGAAATCACGAAAATA
CAGTGAATACGGTAACACTGAGACGTTTATAGTGGCCAAATATTCACCGA
AAGGCAATTTTTATATGACTGGCAAGAAATTGAGGGATTATACTGCTAAC
GTTCAACCAAGAAAAGCCGGATCTGTCACACCAACGGTTGAGGAACTGGA
CCCGACTTTAAAACAAGCATGTGAAAACGGTTATGGAGATGGTCAATGCC
ATGACTTTTTGAATGATTGGGGTTACACATGTCATGGAGATGAATTTGAA
agttatttcaaagaaaattgtTACAAAGCTTGTGGATATTGTTAAATGGA
GATCTTATATTTATCACTTTTTGCAAGTCTAATCGTCGTATTCTCAGAAG
CAATAGAAACATCACTCACTCCCGGAGAAGTTGAAATATGTACTGGTGCA
CATAACAAGCTCCGACGGCTGCACAAGAACACACCTAGCTTGGAATGGGA
TGACTCGTTAGCCGCTGCGGCACAAAGATACGCCGAAAAGCTAGTGGAAA
TAAATCGAAAATCATCGACCAATCAGTTGATTCATGAACACCCAACGCAT
GGCATGGGAGAGAACTTATATTGGCAGGATAACAGGAAGAAAGGAACATG
CGCTGATGCTAGTCTAGCTTGGTATAATGAGATTAACGACTACAGCTACG
CACTTGGTGATACTAAGAATGGAATGCCAGTCGGTCATTTTACTCAATTA
GTATGgaagaaaactttgaaattcGGTGTAGGTATCGCTACAATGAAATC
ACGAAAATACAGTGAATACGGTAACACTGAGACGTTTATAGTGGCCAAAT
ATTCACCGAAAGGCAATTTTTATATGACTGGCAAGAAATTGAGGGATTAT
ACTGCTAACGTTCAACCAAGAAAAGCCGGATCTGTCACACCAACGGTTGA
GGAACTGGACCCGACTTTAAAACAAGCATGTGAAAACGGTTATGGAGATG
GTCAATGCCATGACTTTTTGAATGATTGGGGTTACACATGTCATGGAGAT
GAATTTGAAagttatttcaaagaaaattgtTACAAAGCTTGTGGATATTG
TTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032255XLOC_032255Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050892-proteinTCONS_00050892-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050892-exon-scaffold_19-1491911889:730853..731005TCONS_00050892-exon-scaffold_19-1491911889:730853..731005Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:730853..731005TCONS_00050892-exon-scaffold_19-1510915933:730853..731005Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:730853..731005TCONS_00050892-exon-scaffold_19-1575043694:730853..731005Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1491911889:732721..732756TCONS_00050892-exon-scaffold_19-1491911889:732721..732756Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:732721..732756TCONS_00050892-exon-scaffold_19-1510915933:732721..732756Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:732721..732756TCONS_00050892-exon-scaffold_19-1575043694:732721..732756Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1491911889:733503..733740TCONS_00050892-exon-scaffold_19-1491911889:733503..733740Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:733503..733740TCONS_00050892-exon-scaffold_19-1510915933:733503..733740Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:733503..733740TCONS_00050892-exon-scaffold_19-1575043694:733503..733740Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1491911889:733919..734028TCONS_00050892-exon-scaffold_19-1491911889:733919..734028Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:733919..734028TCONS_00050892-exon-scaffold_19-1510915933:733919..734028Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:733919..734028TCONS_00050892-exon-scaffold_19-1575043694:733919..734028Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1491911889:734815..734964TCONS_00050892-exon-scaffold_19-1491911889:734815..734964Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:734815..734964TCONS_00050892-exon-scaffold_19-1510915933:734815..734964Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:734815..734964TCONS_00050892-exon-scaffold_19-1575043694:734815..734964Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1491911889:735397..735845TCONS_00050892-exon-scaffold_19-1491911889:735397..735845Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1510915933:735397..735845TCONS_00050892-exon-scaffold_19-1510915933:735397..735845Clytia hemisphaericaexon
TCONS_00050892-exon-scaffold_19-1575043694:735397..735845TCONS_00050892-exon-scaffold_19-1575043694:735397..735845Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:730853..735845 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0516113	0.163136	11.4646	9.53531	0.161254	0.759007	0	0.229398	6.79601	4.33508	21.3624	18.2375	27.8971	31.2734	0	0	22.2019	23.283	2.32572	2.67294	12.3682	10.1949	1.10204	0.67207	0.0424785	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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