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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050937 ID=TCONS_00050937|Name=TCONS_00050937|organism=Clytia hemisphaerica|type=transcript|length=1378bp
TACAGGGGGTGTTAGGGTCAAAATTCAGATTTGctgcttgttttttttgt
tctatACAGGGGTGTTAGGGTCTAAATTCGTATTATCTGCTTAGCATCTG
TGTAATATACATGGGGTTTTAGGGTCAAACTTCAAATTGTCTGTTTACTA
TTTGTGTACCATTCTGCAGTTTGGGACAAAAATCAAGTACTACCAGTACT
GTTTAATACACTAGGACGCTAGATATATTTGGCCAAATTTTTGTACTCTG
TCAGATTCATTTAGGACGTTTTAAGATATTTTGAATGGCAATCTGATCGA
AAGATATGATTGATATACTTATGTTTTGCAatcaatgaaaatgaagaaaa
acttaCTAATAAGTACAGTAAACCTCTTAAACAGTTTGCAAGTAAGACGG
TAAAAAGAATTAATTATCTGAATTATCTGTATGTTTAGGATAAGATAAAG
ATAGAATctcttgaattttgaaatctttatgtatataaaataaaaactta
ctcTCCTAGACAAGGTTTTAAAATTCTAATGAAATAGCATGAGAATAAAA
TATAAAGTCTGATAGAatagcttttagaaaaataagtaaACAAAAAGCTT
ATGTATCCTTTAGTTCCTAATGGTACGGTCTAATTGTGTAAAAAATGTGC
ACATAGGCGTACAAGCATGAGACTTCGCGCAAttgtagtttaggggtcaa
aaatggattcaaatctcagacccaaaaaattggcacctgtttgtgtattt
tacagaccagaacaggctcccaggctaaaatgaatttctttttctccaaa
gtatgtcatgttacataaccgttggaaagcatttttcatgctcttttaga
aaaacattacaactcctatctgaaaatgaagccaataaaagttattgtgg
aaagctttttgaaaaatgatgtaattgctgacgtcagcaaaaattcaaGG
ACCACCCGAAAAAGTTTATTTCTATCAAATTAAATGAGTGGGGGAGTGAG
CAGGAGTGAGCGCAAATCATCAAACACACAAAActcaaatgtttgaaaaa
cctgaatttttttgcatgTAAACTAGGCTTTGGTATGAAAGCAATTTCTT
TTGTCGTCAAAAGACTAAAAATGATCTATCTGACGGACATAAATCACaac
aataaacaaacaaacagattCAATTAAAACATACAATTAAAAGAAAACGC
CTTAGTTCGTAAAATGATCAAATGTgtgttttcattcttttttatttgaa
tgatacattcaaatcatttttttacacAATGGAATCTGTTGGAATTGTTC
TAtataaattcgaatttttgatgTGGATTTGTTGGATCTCTAGGGGTTGT
AAGGgtattttatttggaaattcgCTAG Run BLAST on NCBI transcript from alignment at scaffold_19:69165..70542 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050937 ID=TCONS_00050937|Name=TCONS_00050937|organism=Clytia hemisphaerica|type=transcript|length=1378bp|location=Sequence derived from alignment at scaffold_19:69165..70542 (Clytia hemisphaerica)
CTAGcgaatttccaaataaaatacCCTTACAACCCCTAGAGATCCAACAA
ATCCAcatcaaaaattcgaatttataTAGAACAATTCCAACAGATTCCAT
Tgtgtaaaaaaatgatttgaatgtatcattcaaataaaaaagaatgaaaa
cacACATTTGATCATTTTACGAACTAAGGCGTTTTCTTTTAATTGTATGT
TTTAATTGaatctgtttgtttgtttattgttGTGATTTATGTCCGTCAGA
TAGATCATTTTTAGTCTTTTGACGACAAAAGAAATTGCTTTCATACCAAA
GCCTAGTTTAcatgcaaaaaaattcaggtttttcaaacatttgagTTTTG
TGTGTTTGATGATTTGCGCTCACTCCTGCTCACTCCCCCACTCATTTAAT
TTGATAGAAATAAACTTTTTCGGGTGGTCCttgaatttttgctgacgtca
gcaattacatcatttttcaaaaagctttccacaataacttttattggctt
cattttcagataggagttgtaatgtttttctaaaagagcatgaaaaatgc
tttccaacggttatgtaacatgacatactttggagaaaaagaaattcatt
ttagcctgggagcctgttctggtctgtaaaatacacaaacaggtgccaat
tttttgggtctgagatttgaatccatttttgacccctaaactacaaTTGC
GCGAAGTCTCATGCTTGTACGCCTATGTGCACATTTTTTACACAATTAGA
CCGTACCATTAGGAACTAAAGGATACATAAGCTTTTTGTttacttatttt
tctaaaagctatTCTATCAGACTTTATATTTTATTCTCATGCTATTTCAT
TAGAATTTTAAAACCTTGTCTAGGAgagtaagtttttattttatatacat
aaagatttcaaaattcaagagATTCTATCTTTATCTTATCCTAAACATAC
AGATAATTCAGATAATTAATTCTTTTTACCGTCTTACTTGCAAACTGTTT
AAGAGGTTTACTGTACTTATTAGtaagtttttcttcattttcattgatTG
CAAAACATAAGTATATCAATCATATCTTTCGATCAGATTGCCATTCAAAA
TATCTTAAAACGTCCTAAATGAATCTGACAGAGTACAAAAATTTGGCCAA
ATATATCTAGCGTCCTAGTGTATTAAACAGTACTGGTAGTACTTGATTTT
TGTCCCAAACTGCAGAATGGTACACAAATAGTAAACAGACAATTTGAAGT
TTGACCCTAAAACCCCATGTATATTACACAGATGCTAAGCAGATAATACG
AATTTAGACCCTAACACCCCTGTatagaacaaaaaaaacaagcagCAAAT
CTGAATTTTGACCCTAACACCCCCTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050937-exon-scaffold_19-1491911889:69165..70542 | TCONS_00050937-exon-scaffold_19-1491911889:69165..70542 | Clytia hemisphaerica | exon |
| TCONS_00050937-exon-scaffold_19-1510915933:69165..70542 | TCONS_00050937-exon-scaffold_19-1510915933:69165..70542 | Clytia hemisphaerica | exon |
| TCONS_00050937-exon-scaffold_19-1575043694:69165..70542 | TCONS_00050937-exon-scaffold_19-1575043694:69165..70542 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:69165..70542 . |
Blast
The following BLAST results are available for this feature:
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