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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050115 ID=TCONS_00050115|Name=TCONS_00050115|organism=Clytia hemisphaerica|type=transcript|length=202bp
ATTTTTGATAGCGCGAAAAttcgttttctttcaaaacttaaaaaatatcg
GAATCAAGCAAGAAATAAAGTGCAACACTTCAACTCAACAAACTTGTACC
TTGTTTGGAAGGTGGCGAATCCTATGTTATGGAAGTAACAATCCAGTTGT
CGTCTTCATCGGTTCAATTTCAGTAACGAACGTTAAACTGGTCGATCAAG
CT Run BLAST on NCBI transcript from alignment at scaffold_167:1462103..1463209- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050115 ID=TCONS_00050115|Name=TCONS_00050115|organism=Clytia hemisphaerica|type=transcript|length=1107bp|location=Sequence derived from alignment at scaffold_167:1462103..1463209- (Clytia hemisphaerica)
ATTTTTGATAGCGCGAAAATTCGTTTTCTTTCAAAACTTAAAAAATATCG
GAATCAAGCAAGAAATAAAGTGCAACACTTCAACTCAACAAAGTAAGTCA
ACTTGTAATTTATCAAACAAATCCAAGTATTTATATTAGTAGGGGGAAAT
TTGTTCGTTTTTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGTTA
TACATTTTTGGAAAGCTAAGGGGTAGGGGAATCAAAATANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAATATTTAGCTTGAGAAAACAGAGACCTGTTATATATTTTTG
GAAAGCTCTCAAAAAATTAAGATTAGTGATATATTGCGAATATAGGTGAT
TTCTTTACCTAACTCGAGATATGTAATCCTTAAAAACAGTGTTTTTCAAT
GTTTTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTAGCGCTTTCTGAAG
CTCAATATCTCGAGTTAGGTACTGAAATCACCTATACTCGCAATATATCA
CTAATCTTAATTTTTTGAGAGCTTTCCAAAAATATACANCGTATTTATTA
CTTTTAGTATACTACTACAGTCGACCAGGTCGACTCTCCATAACTCGAAT
GTCTCCTGATATCTCACAATGTATAACTCGAACAGTTTTTCTCGTTCCTT
TGAGAAAATCTTAGGCTATTTTTCTTCTCTAAAACTCGAACACCCCATAA
CTCGAACGACTACGCAGTCGTAGTATACTGGACTCTGCTTGAGCCACAAA
GACTGGACTGTTGTACCAAAACTCATTACTTTTTCTACTTTTCACAGCTT
GTACCTTGTTTGGAAGGTGGCGAATCCTATGTTATGGAAGTAACAATCCA
GTTGTCGTCTTCATCGGTTCAATTTCAGTAACGAACGTTAAACTGGTCGA
TCAAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050115-exon-scaffold_167-1575043694:1463118..1463209 | TCONS_00050115-exon-scaffold_167-1575043694:1463118..1463209 | Clytia hemisphaerica | exon |
| TCONS_00050115-exon-scaffold_167-1575043694:1462103..1462212 | TCONS_00050115-exon-scaffold_167-1575043694:1462103..1462212 | Clytia hemisphaerica | exon |
| TCONS_00050115-exon-scaffold_167-1510915933:1463118..1463209 | TCONS_00050115-exon-scaffold_167-1510915933:1463118..1463209 | Clytia hemisphaerica | exon |
| TCONS_00050115-exon-scaffold_167-1510915933:1462103..1462212 | TCONS_00050115-exon-scaffold_167-1510915933:1462103..1462212 | Clytia hemisphaerica | exon |
| TCONS_00050115-exon-scaffold_167-1491911889:1463118..1463209 | TCONS_00050115-exon-scaffold_167-1491911889:1463118..1463209 | Clytia hemisphaerica | exon |
| TCONS_00050115-exon-scaffold_167-1491911889:1462103..1462212 | TCONS_00050115-exon-scaffold_167-1491911889:1462103..1462212 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1462103..1463209 - |
Blast
The following BLAST results are available for this feature:
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