TCONS_00049457 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049457
Unique NameTCONS_00049457
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3065

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049457 ID=TCONS_00049457|Name=TCONS_00049457|organism=Clytia hemisphaerica|type=transcript|length=3065bp
AAGAATTTCACACTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCA
GGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAGGAgcagagagaaa
aaaagaaaagACATTAAAAGAATATTTGGTCTTTGGTTTATGAACATTAT
TCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGA
GTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTATAC
TTTTTACACATCTTTGTGGTAAGGTGATTTCAACGGCCAACGGCGACAAA
GAGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCA
ACTTCCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCA
GACTTCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAA
CCTCGACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACG
TTTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTC
GACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGT
CCTAATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCA
ACCACCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGC
ATGGTTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTC
ATCAACAAATCTGGCAGGAGAATCAACATGTTCCAGTCCCTGCCTTACGG
TCACGAGACACGCTTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGG
TGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATATGATATGACGACA
AGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCT
TCGACAAGGAACGAGTGTAGATGCACGAATTACTTCACCCAACTTACGAG
CAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAG
GTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCAT
GAATTACACCATCATGCTCATGAATTCGGTGACGCGGACGTTTTTGCATC
GATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATTCACCTTATG
AAGAACAAACCGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAG
CGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACT
CGGTGGATTTTCATCTCATCTTGACAAGggaGGATATTGGACCAGCAGGG
TTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAA
GGAGAACGGACCCGACACTTCTTTCGTCATCACTCATGAACTTGCACACG
CTTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTG
TCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTT
TCGATGGTCCAAATGTAGTGCGAAAAtgatttggcaaaatttgaaATACT
TCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGC
ATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAG
CTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGAATCCATTGACGG
CGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGTCAACCT
GTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGTG
GTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACG
GTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCC
ACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGCC
GAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTT
TGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTG
CTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAG
TTATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGC
AACGTAGACAAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCT
GGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGG
CAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCA
TCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCA
GGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTAT
CATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAA
AGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGC
AAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGA
AGTTGAACTGGCTATCAACATCGAGTATAAGATCACGATCGAAGCAGTGC
GTGGTAATTCATATTACGGAGATATAGCAATTgatgatattcaattttct
tacGGGCTGTGTAATGCAAAGTCAAGTCAAGACGATAAACAGATCTGTAC
TAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTC
CTGATGGCTATCCCTGTAAATtaccaaaatcgaaaaataatgTTTGCTTT
AGACAAGTTTGTCAGcccGTTAACTGTCATGGTGTTATAAATGGCCGAAA
ATGCTGACgttacaaaaatgatttttgagaaaatttaatgTATTTAATCa
gttttatttgtaaaacttatatttttatgaaagaGAATAGAAAAAGTTTA
GACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATCATTGAC
CACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144915-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049457 ID=TCONS_00049457|Name=TCONS_00049457|organism=Clytia hemisphaerica|type=transcript|length=9514bp|location=Sequence derived from alignment at scaffold_159:135402..144915- (Clytia hemisphaerica)
AAGAATTTCACACTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCA
GGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAA
AAAAGAAAAGGTGAAAGGATTTTTTTGCGAAGGGTTTGAGTCATGATAAT
AAAACGCGTTTGTTGAGTATTTTCGTTTCAACAAGTGATATTATTTATTA
TTGTACCATGAGCAAGTTGTTCGGGATTCAATGTAAGATGACTCTTTTGC
AAAACATCAATCACTTCTCATGTCATACTACACTGTGTACTACAAAAAAG
AAAGCAAGAAAAAAAAGTTTTGAAAAATTGATGTGTTGTTGAATTGAAAA
AGCTGGAAGTTTGAAACTCGAGATTTTTATTGGCAATTCAGTGGTTTCGA
AGTTAATGATTCTAATTATTGTGTAACACTTTCAACCTTGTTCCTTTCTT
TCTTAGACATTAAAAGAATATTTGGTCTTTGGTTTATGAACATTATTCCA
CCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGG
TGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTT
TACACATCTTTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATAT
CATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATAGCTGACCAGGAAC
AGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGCAAAACAAATACAA
ACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTACACTCACCCAAAAT
AAAGCTCAAAGAAATTATTGTACTTGATTGATATCACGGTGAGAAGTTGG
AAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATACGCGTTAACA
AAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAAATATTGACAA
TCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAGAGC
TTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAGG
AGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTTTGCGAAGGGTTTG
AGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTTCAACAAGTGA
TATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATTCAATGTAAGA
TGATTCTTTTGCAAAACATCAATCACTTCTCATGTCATACTACACTGTGT
ACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAATTGATGTGTTG
TTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTTATTGGCAATT
CAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTAAAACTTTCAACCT
TGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCTTTGGTTTATG
AACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTT
GGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCCACACCCTTGC
TGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTA
TTTCACTGTATATCATGTCACTTATTATTAAGTAGTATGTTTGAACGTTA
ATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTGTTTCTAAACAATT
CACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGCGACAAAGGTATGA
GTCATTCCTAATACAAACTTTATACTATGCTGCTTTCTATGACGGAAGGG
TTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAACAATAATGACACCC
TTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCATAAAGCGGCAACAA
GCGCCACAAAACTACCAACTTCCACCACACCTTCGACAGCCTCAACCAAA
CAATAGACAACATTTCAGACTTCCAGCTTATCTGAGACAACCACAAACCA
ACCCTTATCTTAGACAACCTCGACCTGATCCACGATATGCACCCAACCGA
CCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTAATACTCGCTT
CCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCTCGCCCTGACC
CAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCAGCCACGCCCT
ACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACCATTTCGTCCGCC
TCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAACAAGACCTGGAG
AAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGAATCAACGTAAGT
TTAACAACAAAGTCTTCTTATTCACCATTCAAAACGTGACCGAGATGAGC
ACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGTTCCAGTCCCTGCC
TTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAACGAGCCGC
GAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATATGATATG
ACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAACATA
TCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTCACGTAAGA
AGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAACAAGTAATTTGAA
AAATATTTAGTGTACAGCAATTCTTCTCAAATATCTAATTTTAACTTTAA
TTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCGAAGTGT
TCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCAATGCTGGACC
ACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCTCATGAATTCG
GTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATGAAAATCTTAAGAA
GGTGATTGTTACCATTTTTCATCTTCATCTACAGGTGACGCGGACGTTTT
TGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATTCAC
CTTATGAAGAACAAACCGGTCAGTACAACATATATTGTCTCAACACCACA
CACAGTACCAGACCCCTTCATTCACATTGTATTCTTCCCTTTCACATTTT
CAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGG
AGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATT
TTCATCTCATCTTGACAAGGTATACATATTGCAGCATTTTCTCTAACCAT
TCATTATTTTACATCCCTACATCAATTTCTAATAATTGATCAAGGTATTT
TCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGATTTATATAAAAAGT
TGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGGAGCAAGAATCATC
ATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGATATTGGACCAGCAG
GTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGATTTGCTTATATAGA
TTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTATCTTTCCAACACA
CACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTGCAT
TAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCATGAACTT
GCACACGCGTAAGTTATACAACAGAGATAGGAGATCTTTATTTATTAGCT
GTTACCCGTTATATTTTCTAACGTTGACCATGTCTACAACACTGTGTTTT
CACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGTTTGCTGGCTGTTA
CTTATGATAATAGTTTCCCGATTACCCGATTACCGTAATCCGTTTTTGTG
ATTCAGTTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAGAGA
ATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCTTCC
AATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTTGGCAAAATTTGAA
GTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGATGAATATTGCTTT
GAAAGAGGTAAATAGAATAAATACCGTAGATAACTAGATAAATAGCAATT
TCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAGAACAAACCAAAAA
TGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGGGGAGCTGATG
GGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCGCTCTTCCTTG
CACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCATGTATTCTATAACA
GATATACTCTACTAGAATCGTAAGTTGACATAATTCGATGTGAACTCATC
ATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTTCAGAATCCATTGA
CGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGTCAA
CCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAA
GGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAAAGCTTACAGACAA
AGAGGTAATTAATCATAAAGTTTCTCATAAAAACATGAATTTATCGAACA
ATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTGGACAGTGGTGCAA
AAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGGTGGGT
GGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGA
TGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGTAAGACCC
AAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCTTGACAGTATA
TTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAACAGGCCGAGG
TTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTTGAT
CCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGGTAA
GCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGAAGAAACAAAC
TATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCTTAAGCGGAGA
AATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGATA
ACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACGTAGACAAGGT
AAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAATGTAAAACAA
CAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTGCATCTCATCT
ATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAACGTGCGATTTTGAA
AGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAA
TATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATA
ACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGG
GTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATC
ACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATCACATGT
ATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCAT
TCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCA
AGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAA
CAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTG
TTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGT
CAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACTTACCGACCAT
GACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGG
TAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTTACG
GGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTG
GGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAGTCA
AGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGTC
AGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGTA
CTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTT
CCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTGCTT
TAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATCAAACCAGTTAACG
GTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTGCAACCGAAAGTCC
ACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGTA
AGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCTTGAC
AGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAACAGG
CCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTAT
TTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAAT
TGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGAAGAA
ACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCTTAAG
CGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGA
ATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGCAACGTAGA
CAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAATGTA
AAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTGCATC
TCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAATTTAACGTGCGAT
TTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGG
GTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCG
TTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCG
TCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTT
GGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATC
ACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGC
AAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTG
GTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTC
ACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGT
TGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAG
GATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACTTACC
GACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAGCAGT
GCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTT
CTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGA
AAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAAT
AAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTA
CCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGA
TCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGG
AGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGT
TTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNGAAATACAC
ATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCA
AGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGT
ATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATT
CCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGT
TATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTCTTGATGATGAAAA
GAAGGAATTACCGACCATGACCAATATATCTCAATATGTTTCTTATTAGA
TCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATT
GATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGG
TAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAA
CAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCA
TTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTC
TCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTC
AAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAA
AATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACAT
TTTATTGCAAATGATCCAGATAAAGGTATTGAACCGCATTGAATATCTTT
AATCTTTATTCTCATTCACCAAAGAATGAGAGATAATGACAATTTATCAT
TCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTATAAATGGCCGAAAA
TGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAATGTATTTAATCAG
TTTTATTTGTAAAACTTATATTTTTATGAAAGAGAATAGAAAAAGTTTAG
ACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATCATTGACC
ACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049457-exon-scaffold_159-1575043694:144806..144915TCONS_00049457-exon-scaffold_159-1575043694:144806..144915Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:144300..144459TCONS_00049457-exon-scaffold_159-1575043694:144300..144459Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:143172..143202TCONS_00049457-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:142572..143047TCONS_00049457-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:142272..142482TCONS_00049457-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:142016..142155TCONS_00049457-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:141848..141931TCONS_00049457-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:141647..141762TCONS_00049457-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:141416..141435TCONS_00049457-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:141208..141310TCONS_00049457-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:140866..141009TCONS_00049457-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:140606..140747TCONS_00049457-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:140365..140475TCONS_00049457-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:140075..140223TCONS_00049457-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:137764..137866TCONS_00049457-exon-scaffold_159-1575043694:137764..137866Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:137562..137673TCONS_00049457-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:137023..137441TCONS_00049457-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:136017..136116TCONS_00049457-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:135728..135861TCONS_00049457-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1575043694:135402..135601TCONS_00049457-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:144806..144915TCONS_00049457-exon-scaffold_159-1510915933:144806..144915Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:144300..144459TCONS_00049457-exon-scaffold_159-1510915933:144300..144459Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:143172..143202TCONS_00049457-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:142572..143047TCONS_00049457-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:142272..142482TCONS_00049457-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:142016..142155TCONS_00049457-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:141848..141931TCONS_00049457-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:141647..141762TCONS_00049457-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:141416..141435TCONS_00049457-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:141208..141310TCONS_00049457-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:140866..141009TCONS_00049457-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:140606..140747TCONS_00049457-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:140365..140475TCONS_00049457-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:140075..140223TCONS_00049457-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:137764..137866TCONS_00049457-exon-scaffold_159-1510915933:137764..137866Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:137562..137673TCONS_00049457-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:137023..137441TCONS_00049457-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:136017..136116TCONS_00049457-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:135728..135861TCONS_00049457-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1510915933:135402..135601TCONS_00049457-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:144806..144915TCONS_00049457-exon-scaffold_159-1491911889:144806..144915Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:144300..144459TCONS_00049457-exon-scaffold_159-1491911889:144300..144459Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:143172..143202TCONS_00049457-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:142572..143047TCONS_00049457-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:142272..142482TCONS_00049457-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:142016..142155TCONS_00049457-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:141848..141931TCONS_00049457-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:141647..141762TCONS_00049457-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:141416..141435TCONS_00049457-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:141208..141310TCONS_00049457-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:140866..141009TCONS_00049457-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:140606..140747TCONS_00049457-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:140365..140475TCONS_00049457-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:140075..140223TCONS_00049457-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:137764..137866TCONS_00049457-exon-scaffold_159-1491911889:137764..137866Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:137562..137673TCONS_00049457-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:137023..137441TCONS_00049457-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:136017..136116TCONS_00049457-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:135728..135861TCONS_00049457-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049457-exon-scaffold_159-1491911889:135402..135601TCONS_00049457-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144915 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.91995	3.10876	0.142222	0	0.493137	0	0.839611	2.19427	0.866569	0.32412	0.750025	0.980304	2.88462	1.68183	3.88044	1.84866	0.32665	1.64767	2.59073	3.91835	0	3.83987e-09	0.614922	1.66251
Blast
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BLAST of TCONS_00049457 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.131e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 1 
Query: 1081 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2049
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049457 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS142.131e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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