TCONS_00049122 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049122
Unique NameTCONS_00049122
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4697

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049122 ID=TCONS_00049122|Name=TCONS_00049122|organism=Clytia hemisphaerica|type=transcript|length=4697bp
GTGAAATCTAAACGAAAAGCAGAAATTGTTGGAAGCTGGCTAAAAGACCC
CCAGCAATGAAGCCCGTAATTGCAAAAGGTTCCATCCACACGAGCAGGAA
AGAAATATCAAAGTTGGGACTAAAAGAAGGCTGACTGGACTGCAAAACAG
GCAATTCAGCTGAAAATTGGGCCGCTGCAGCAGCACTATGGGCTCAGCAA
CGACAAATGCAAGATCAGTATCCACAAAGTGGAGGAGAGAGACCACCAGA
ACCCCCAGGTCCTCCCCCAGATGCTCCATCCCTACCTAATGATCAAAATG
AGAACAAAGTTGAGGTTCATGATTACAACCATGGAGCAGCAAATGAACAG
ACTCAAGTGTTTGATTACCAACACCAAAATGCACCAGCCGAACCACAACC
ACCTCCAGACTCTAATGTCATTGATTATAATCACGGAAAATCAGAGATGC
CACCTGTAGATCAATACCAGTATAATAATTGGGACTACAATCAGCAGAAC
TGGCAAGATCCAGCAGTTTATCAACAACAGCAACAGCAGTGGGCTGACTG
GAATCAACAGCAACACAATCAACACAATGACAATCATCATAACCATGAAC
AAAATGGTGGCAACTTTCATCACCAGCAGGATTATGATCAAAATGACGGA
CGTAGTAGGGACCGTAATCACACTCATCATAATCATGGGTATAGCGACCA
ATCAGGAAATAATACACCGGATCCTGTTGAGATGAAGAAGAAATCTTTGC
CTCTGTGGTTGAGGGATGGTCTTGAGAAATTggaaaagaacaaacaaaaa
caagagaagAAAGTCATTCCGAGTGCTAAGAGCATCTCAGGATATCAACA
TGGTTCACCAACATCTTCGCCGGAAAAAGAGGAGAGTGATGCAGAACTAA
GCGACAAAAGTGATAATGAAGGGACATCGTCCCCAGTGAAACATCCACTA
TCCCCTCCAGCTCGTCGTCAAAAACATTCATCATCTGAAGACGAAGAAAT
TTCTGAAGAGGAGAAACAGCGCAGAACTGTAAGTTTTCATTCTATATTCA
GATGCATTATAATTTtgaatgtttgtttttaaaatgccATTTATCATTTA
TCAATTTTACCTATgaatttgacatatttttcgGCAACTCTTATTACTTA
GTTCACATCAATCTTTTCAGTTCTGTATTTTTggcatattttttgtttac
tgtaTGACCTTCATGATTGACTTTAATTGcagatgttgaaaataaaaact
tggATGACAGAAACCCTCTTAAAGGTTACAAATTCTGAGTTAACGAATGT
TTGTGAAGAGGTTTTCTTTGAGATGAAACGATCAGCAAAGAACAAGGCAA
CCAATGTTCGACGTTCTGGAGGTTTGGAGTCTCTCCGTTCGATAGGTGAA
GATGACGTCACGAGTAGTGAAGAGGAAGAAGAACCAATCAAACCTCCTCC
ACGAAAATCTCGTTTCGATGAAAAACCATCTTCGTTACCAAGGAAACCAA
AAGCAACAACAGACGAGGAGGATACATCTCCCGCCCAAAAACCTACCAAA
GCTGAACACGACATTAGGAAAGATGTACCTGTTGTCATTTCAAAGGACTC
TAAAATTAAAGATAAGAGCGAGAAACGTAACAACGAGGAGAAAACGAGTA
AACGCAAAGACGTTGATAAGAAAAAGAGCCCGCAACATAAGagttccaaa
aagaaaaagaagaggaaATATTCGGACAGTGAGTCGGACAGATCGGACGA
TTCGTATTACAGTTCGGACGAAGAAAGTGATCATAAGAAAAGTCGTAGTA
AGAAATCTTCTAAACGCCACCGCTCGGACAGTCGTTCGCCCGTGCGTAAA
AGTCGAAAGAAATCGAAATACGACTCGGATGATAGCGATCATTACGAAGA
GAAACGaagcaagaaaaagaagaaaaaggaaCGCTATTCATCGGACGAGG
AAAGTTATGATAGTGATTATTCTTCTCAACGtaagaaaaaatccaagggt
AAGAAGCATAAACAAAGAGACCGATCTATATCCAGGTCACCGAAGCGCTC
GAAGAAGAAAAAGTGACCCATGTGATAGGTAAGTTAGGCTATTACTTGCA
GAGTGCAGTTTGGGTTGAACTGACTAGACTTTCTTTAAAAGGTGATCAGG
AACCACTGCTAGTGCTCAGGTTATCGGATCGTGGCAGCATGGAGGATATA
TATACAGAGATAAAGATTTATCCCAAAAACGACATtctttgaaactttca
aacgGGACATTCAGTGATTATAGAATATTATGaacattttttagattttt
tctttaattttgtaaaatttgtacaAAGAAGGTGAAAGGaaagaatattt
ttaccaatttatATCCATTTGTGTTTACGTTCTTCTTACaaatattgaaa
aggaaaattgaCAACTTCCAATTCTTCAGAATTCGAACAAGtttgaagaa
attgattttcgGATATTCTAGAATAAAACATCTCTACAAAAACTTTCGAT
TTTGGATTGTTTATTTCGACAACAATTTACAATAaattataaagcaatag
attaGTATTTAAATATATTAGTATCTGTTCATTATAACATTATTTTTGCT
TCTGCTGCCTGCTACGGCACGGAACCAAATCTTGTAGTAGTAGCGATTAT
TGTGATACACTCTCAGTGTCTTTGTGTTCTCACTGTTCCCCAGCTCCATA
TGTTCTAATGACGTCACGGATAGGTGCTCGGCACATGGGGCAAGTCTGTC
CGTTCATTTTCAAATGTAATGCACAAGAGTGACATGCGCACATGTGTCCA
CATTGATAGAAAACTGTATCAATTGATTGGTCGATGCAAATAGCACATTG
TCCTCTCTGGACAGGTGTTGTGTGGTTGTTTTGTTGAATGTTCAGGATGG
CACTTGACGTTGGACGATCTTGTTGGTCTAAAACAGAATGCAAATTTGTA
TTAAGAGTTATGTTACCGAATACTTCCAGTAACATCTGTGCAATTCAGCC
CGACAGAAAGAATTCAATAATATTGGGTTGGTACGATGATGATAATAGTA
GTAAGATTAATTTACGTTGGAAAATTGTTGCGAATTCTGTGTTTAAGGTT
CAAAAACCGTAGATAACTTCTTTCATTGAAGAAACTTACCTGGTTTACTA
GCGAGATAGTCGCTCATGAAAGCCTGAAAGACAGCTGCAACTTCTTGTCT
AACAGCGCGTTGAGTATCAAGTTGTACTTCCATCGTCATTCGAAGAAGTT
GTTTCATTTCGTTCAGTTCTTGTTTAAGCTCTTGAATCTCGTGTGGTGAG
CTGGCTCCTCTTTCGTTGATTGTTCTTAATGACGTTGGGCGTTGAATCGG
AGGACGTTGTCTTGGTTGTTGAGAGCGAACGAATGGGCGTGGCGTTGTGG
TGTTTCCACCTAATGACTCCACACGTTGCTGAAATAGGCAAACTTAATTA
ATAActaaattttcaaacttgattttTGTATGTCACGCTTTGATTAACTT
GGTTGGTTTTTTAAAAGCAGAAAAAATGTCTTAGATTAATGTAATTGTAA
TTTCGAAAGGTTTGGATGTTAAGATTCTTACCTGAACCATATTCTCCAAT
TCATCACGGAAATCGTCTTGTAGCATATTACTGACAACTTGTAGACTTTG
TAGACGAGTGATGTCAGTAGCTATGCTTTCTGTTAAGATTTGTACACTTG
CTTGCACTGTTGATTGAAGTAATGCTGGATCAACCAAAGGCGTTGTCGAA
GGTGTGGATGTCCCAGGTAATGGTGGTGGCGGTGGCGGGTTCGATGTTCG
GCTGGCGGGAGTAGATTCTTGAGGTTGTACActgtaaaataaatattaat
aatGTCGAATGACATTTAAGTATCTTAGcaacaaaactttgaaaacaagA
ACCAAGGCGATTTTATGCATTTAGAGAAGTGTAtattaaaatatctttct
tgGGAAATTTAACCCAGCGCATAGAGAAGTCATCTGTAAGTTAATTAGAG
AGTTTTTTTTACCTTGACTGTTGTCTTTGTTGTCGTTGAGCGATCTGTCT
ACTGAGTTGGTCTCGGAAAGATCCTCGTGCTGGTTCCGTTCGATTATTGT
CATACCTTCTTGGGACGGGTCTTCTAGTCCCTCTTGTATTGCTGTTTGAG
CTTCTTGCTGTTGGTGCAGTAGACCGTCCACTTAATGTCGCTTCAAGCTG
ACGTCGAAATCCATTTTGTATCGCGGAGCTTACTCTGCTAAGTTGTAGAA
GGGATTGGACGTCATTTGCGACTGTTTCAGGTCTGTTTTGAGCTTCTTCT
TCGGCCCTTTCTTGTTGCGTTGGCNTGTTTCAGGTCTGTTTTGAGCTTCT
TCTTCCGCCCTTTCTTGTTGTGTTGGACCATTGATTGCACGCTCAAAGAA
GTTCTCGATACTAGCTCTCGCATTACCCCCTGTTACTGGTCGCTCTCCAA
GTTGGATTCTTCTAAGTTCTAAAAATCTTTCACTGTaaagaaaaaataga
ttttatgattgattcggaaattttcgaaatatttaTCACGCCTTTTTTCC
TTTTCGTTATGATCGAATAAGATAATATATAACTAGCGGTCCCAGACCTT
TAACTGATTAAAATGATAAATCATATTTAGGACCTTCAAATCCGTTGGGA
AAGTATCATTTACTCATACTTCTAATATCTTTCATCGTGGAATAACT
Run BLAST on NCBI

transcript from alignment at scaffold_152:97885..109388-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049122 ID=TCONS_00049122|Name=TCONS_00049122|organism=Clytia hemisphaerica|type=transcript|length=11504bp|location=Sequence derived from alignment at scaffold_152:97885..109388- (Clytia hemisphaerica)
GTGAAATCTAAACGAAAAGCAGAAATTGTTGGAAGCTGGCTAAAAGACCC CCAGCAATGAAGCCCGTAATTGCAAAAGGTTCCATCCACACGAGCAGGAA AGAAATATCAAAGTTGGGACTAAAAGAAGGCTGACTGGACTGCAAAACAG GTATACCTATGTCATATTTATTTGAATTGATTAGAAATATAATATCCCCT TAATGAATCCATAGGTATCTTGCCAACTGTTTCCACGAATATTATTGCCA AAAAAAAAAAAAGAAACATATTAGTCATAACCATCTATAATCAATCAATA TCATCCACCAGACGATATCACCTACCAGGATTTTCAATCTGCGGACCTAG GCTGGGGCTCGGTTATTATCAGTTAGGGTTAGGGTTGGTGGCTGGAGCTT GAAAGTCATAATAGTCAGGCGTAGAAACTTTCGCGAGCTGAAACTTTCGC GATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATACACGTCTTTAA AAATTCTAGGAAGGGCCATTCGCCAAAGTTTATGCTCGCGAAAAATTCTT GACAAAATAGAAAATCTGTAAAACTTCAAACTTTGAATAAAATGTAACTT TTATGGCACTTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAATG TTTCAAGCCAACCCAAGAAGTATATGTGTATATGTCTCTAAGCCATTTTT TCATGTGAAAATTCTCAATTTTATGTCTTGATTCGTGAAAGTTTATGCTC GCAAAAAATATTTTTCGTTAAATTCGCGAAAGTAAATGTCGTGAATTTCG CGATTTTTCGTCCTCGCAAAAGTTTCTCCTCGAGAAAGTTTGTACGCTTA AAGTAGACCTTTTCGCCTTTCCATCCGCCATCTTGAATTGTATGCAAAAA TTATGGTGGCTGAATTGCCGTGGTTAAATACCCTTAGAAAGTATGCAAAA CGTATGCAAAAAGAAGGTATTAATATAAAAAAAACTTACATGCATAATTG GCATTATATTAAAGTGTAATCTTGTAGAAGAAAGATTAAATTTGCTTCTT TTGAAAACTAGAAATTATCAAATTCGCTCATCTCTTAGAAGAAGCACTTC AAAAAAACATAACATTAGACATAAACTCAAGCTGAAAAATCACCCGCAAA GGTACAAATATAATCCTTATTCAGCTGACGGTAAATTATTCTCCTGGGAA TGGAACCGCCCAAATGGATCAAATCAAAACATTGTGACGTCATAATTACT GCTTTCAGATTGCAATTTAATCAGGATAGAAGATAGGAAATAGAAAATAC GGGGGAAATAAGAGAGGATGCATCCTGGTGGATGATATTGTTTGCCAGCC GTGCTGGTGGGATTTTAGATTCAAGTGTCCCGCATCTTTTTTTATGCCGT CAGTGATTTGTTATGCAGTTATGGTAAATTATGGCTGTTATTCATTAGAT TGTCACCTTCCCCGCCTAAAGATGTATTCATGGTATTTTCAAAACAATAA CTGTGAAAAAAACTATCAGTCAATATTTTTAAGTTTTTGTAGCGCATTTT ATAGCTCTTTTTGGCCTGATTCAAGGTACACTTGAAATCAGTGCTTATAA ATAGGAATAATCAGAAAACACCTACCGTCAAAATAGGCCTCTTACTTATC AGGATGTCATGTTCAATAGTTGAACAATTCAACCTTAAAGTAATGACACA TCAATGCATAATTATCATAGTGTGCACCATTTTTTTTCTTATCATTGTTT TGATGCTGTAGTTTTTTGATTATTCAACATGACATATCATGATTTGCAAA ATGTCTATTGGAGCAGGGGGGGCACCACAGTGGGCCCAGAGGTGGAAATA GGGAAAAAACGAAAGTTAAAATTTTGCTTTATTAATATAATTTATGGAAT CTTGAATAAATTTCTGATCAGATNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTTGAAAACTACAGACACTAACCTTTCTAAAAATGCTGGAGTTTTGA TGTGACACTTAGCGGTTTAAAAGTTCAAATTTTGCCTGCATTTTCCAAGC TAAAAAACTCAATTTTCATGATAAATCTCAAAAGAAAGTCAAAAGTTGAA GTCTACTATGTTCTATCTCATGTAATGTGACCCTAGAGCTCTATGAAAGC CTTTATAATACAAAAATTGTAAGAAATAGTTTTTTGTTGCTCTCCCTCTC CCTATTTCCAAACTTTTGCCATCTGGGCCCAGTGTGGGCACGCAGTTACT ACAAGACAGTATGACACTTACTACCGTGGTGGTACTGTATTCACAAAAAA TTTGTTAAAAAAAATATTTTTGTTATAAATGGACGAAAATTTTTTTTTTT CTCAGACCCAACTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTT CTCAACAGCTGTTAACCAAGTAAATTAAAAGAAAATCTAGCACAAAAATG GCTTTAGGTTGAAAAATAATCGCAATTTAGGGTAATTTCGAGCATGTTTT TGATGATATCACTCAAAAAAAGGGGTGGTACCTGGAAATCTTTTCTGAAA ACAGTTACTACCAAGGTGTAATAACTGCAAAGGGTGGTGGTCCTGAAAAA AAAGTGCTGAAAAAGCATTTACATCATGTCTTGTAGTAACTGCGTGCCCC CCTGATTGGAGTTACTTTCATAAGCAAACGGTAACTTTCATAGCCTTCAA TAGTTGGCACTAACTTTTGGTCTGTAATTTAGAAATTACACAATTAGTTT GCTAGATTATGATATAAGTAAGTTATGTTCTGGCTTTCTGACTTATAGAT AAGTCAGGAACCAGAAATATTTGTGATTTAGAGGCTTTAAAATTTGCTAC ACAGAGTAACCCCAAATCATGGTATACTATAAGTTAAAAAAAGAATAGAA TGGTTTAAGAATAACTCAGCTGAATACTAAAATAAAATTTATGTTTTTCT CTTTTTCTTTCTAGGTAATGTTGGTTACTGTTATTTTTTGAATCATTTGT GATTGGATTTATTTTTGTGTTATTTTGTGTAAAGGTCTGAGCTTTAGTTT TAAGCATAGACACATAAGTATGTGGCAACAGAATCCAGGTTGGGGCTGGC CACCTAATCAATATAATCAGTATTCTCAACAACAAGGTATGTATTTAAAG TTAAACATTGATGATATTGTTTTATTTCAATAAAGATCTTTGGATATCAA ACTATAAATTGTTTTTCGTTTCTTTCAGGCAATTCAGCTGAAAATTGGGC CGCTGCAGCAGCACTATGGGCTCAGCAACGACAAATGCAAGATCAGTATC CACAAAGTGGAGGAGAGAGACCACCAGAACCCCCAGGTCCTCCCCCAGAT GCTCCATCCCTACCTAATGATCAAAATGAGAACAAAGTTGAGGTTCATGA TTACAACCATGGAGCAGCAAATGAACAGACTCAAGTGTTTGATTACCAAC ACCAAAATGCACCAGCCGAACCACAACCACCTCCAGACTCTAATGTCATT GATTATAATCACGGAAAATCAGAGATGCCACCTGTAGATCAATACCAGTA TAATAATTGGGACTACAATCAGCAGAACTGGCAAGATCCAGCAGTTTATC AACAACAGCAACAGCAGTGGGCTGACTGGAATCAACAGCAACACAATCAA CACAATGACAATCATCATAACCATGAACAAAATGGTGGCAACTTTCATCA CCAGCAGGATTATGATCAAAATGACGGACGTAGTAGGGACCGTAATCACA CTCATCATAATCATGGGTATAGCGACCAATCAGGAAATAATACACCGGGT AAGTTGTCAGTTAAAGATAAAACAAAAAAATGCGTAGTAGCTTTTTTCTC TTCTAGACAAAAGATTAGCTGGGATTTCTGTTTTGGTAACAATTCAAAAA ATACAATCAAAATGTTAAAAAAATGCCCATCAATTTAATAATGAGTGAAA GTCAGGAAATTTTGTAAGGTTGTATTGTAGTAATCCAAAGACATCTGTCC AGGTTAACCACTTTCAGCTCCATTCCATGACCAGGTTTGATATTTCTTTC CAGATCCTGTTGAGATGAAGAAGAAATCTTTGCCTCTGTGGTTGAGGGAT GGTCTTGAGAAATTGGAAAAGAACAAACAAAAACAAGAGAAGAAAGTCAT TCCGAGTGCTAAGAGCATCTCAGGATATCAACATGGTTCACCAACATCTT CGCCGGAAAAAGAGGAGGTATCCATCAATTTGTATCAAACATAAAATTTA AAAAAAACTTTTTCTTTTTAGTCATAAGAGGATTAATTGGAAATTTTGTC AATTCTCCCATCTTGCCCCGTCCCTAAACTTCAGTTCATCTGCAAATAGA TAATAGTCGATANTTCTCCCATCTTGCCCCGTCCCTATACTTCAGTTCAT CTGCATGATAATAGTCGATATAAAACTTAAAAGAGTTGTCTAATCGCCTG ATCTCTACACTGAAAGAAGTTTACCATTTCTAACCCAGAACCATAACATC GCATCAATAATATCTAAGAATCGATACAACGAGTTTAATTTTCCACTTGT AGAGTGATGCAGAACTAAGCGACAAAAGTGATAATGAAGGGACATCGTCC CCAGTGAAACATCCACTATCCCCTCCAGCTCGTCGTCAAAAACATTCATC ATCTGAAGACGAAGAAATTTCTGAAGAGGAGAAACAGCGCAGAACTGTAA GTTTTCATTCTATATTCAGATGCATTATAATTTTGAATGTTTGTTTTTAA AATGCCATTTATCATTTATCAATTTTACCTATGAATTTGACATATTTTTC GGCAACTCTTATTACTTAGTTCACATCAATCTTTTCAGTTCTGTATTTTT GGCATATTTTTTGTTTACTGTATGACCTTCATGATTGACTTTAATTGCAG ATGTTGAAAATAAAAACTTGGATGACAGAAACCCTCTTAAAGGTTACAAA TTCTGAGTTAACGAATGTTTGTGAAGAGGTTTTCTTTGAGATGAAACGAT CAGGTGAGTTTATCAATCAAACCCTCTCTCCCTCCCTCTCCCTCTCTACA TCCCAGATGAGATTTTTTCGTGTGTTGGTATTTGTGTAAGTAAAAGGAGA GACGACACAAAGATTTCGAATCTATTTAAAGTTGTAAATTAATATAAATC AAGAAAGTACATTTCCAAAACCATTTTCTTATACATTGGTTGTCATTTGT ATTTATTAGCAAAGACAGCGATTTACAGACCTATCTACTATTTTGATTTT AACTGGAAATTTATTTGCGATTCTCTAACAGATTTTTCACGTATTGCACT CCAAGCTACCCTCTGACATATTTTGCTTTTATTGGACTTATATATTCTTA TAGCAAAGAACAAGGCAACCAATGTTCGACGTTCTGGAGGTTTGGAGTCT CTCCGTTCGATAGGTAAGTTCCTGTAGTTTTGTGAGGAAGCAAGAGGAAG GAGGCTTGGAGTAGATATCAGAATGAATAAAGTGTTTGATTTTCAAACCC GAGTGACGTGCATATACGTTCGAAATCAGCCAATATACCGACTCCCAGAC TTAAAGCTAAAACTCCTGACCAGTTAATGTTACCGAATCCGTTGTTCAAG TTTTAGAATTCAAAAAAAAAAAATTGATTCAAAGTTTTTAACCTGGAAAG GTTAAGAATAGTAGCTCCTCAAAAGTGAAAATCAACACGCATATTTTCTT CAGGTGAAGATGACGTCACGAGTAGTGAAGAGGAAGAAGAACCAATCAAA CCTCCTCCACGAAAATCTCGTTTCGATGAAAAACCATCTTCGTTACCAAG GAAACCAAAAGCAACAACAGACGAGGAGGATACATCTCCCGCCCAAAAAC CTACCAAAGCTGAACACGACATTAGGAAAGATGTACCTGTTGTCATTTCA AAGGACTCTAAAATTAAAGATAAGAGCGAGAAACGTAACAACGAGGAGAA AACGAGTAAACGCAAAGACGTTGATAAGAAAAAGAGCCCGCAACATAAGA GTTCCAAAAAGAAAAAGAAGAGGAAATATTCGGACAGTGAGTCGGACAGA TCGGACGATTCGTATTACAGTTCGGACGAAGAAAGTGATCATAAGAAAAG TCGTAGTAAGAAATCTTCTAAACGCCACCGCTCGGACAGTCGTTCGCCCG TGCGTAAAAGTCGAAAGAAATCGAAATACGACTCGGATGATAGCGATCAT TACGAAGAGAAACGAAGCAAGAAAAAGAAGAAAAAGGAACGCTATTCATC GGACGAGGAAAGTTATGATAGTGATTATTCTTCTCAACGTAAGAAAAAAT CCAAGGGTAAGAAGCATAAACAAAGAGACCGATCTATATCCAGGTAAGCT TGGTATATTTAATAATTACGCATTCATTCTATTAATTCCCTTCCACAACG GTTTTATCTCAATCATTCAAAAAGTTAGCTAGATGATACTGTCATACTGT GTTTTATTCACGAAATCTTGACCAAAGGGACCATTCACAAAGTACGTACG CTCGAAAATGGCAAATTTTTGACTCCCCCTCCCCCTTGTAACGCTTTCGT ACGCTTTATGTGTACCCCCCCCATTCAGCGTACGTACGCTTTTTATTTTT AGTACACCCCCCCCCTAACCAAAGTCGAAACTTGAAACTCTAGTAACAGT AGAATACATATGTAGGTATCCAATCGTATTTATAACAAAGTCTCAAGAAA TTAAAAGAATCTAAGGTGAAAAAAAATACCAAAGGAGAAATGAAAAATAA CAATCGCAAAAACAATTTTTTGATGTGAAAATATTGCGTTTTTCTCTCAA AAAAGACAGTTTAGGAAAAATTACGAGCGTACCTACTTCTCCTCAAGGAC CCCCCTCCCCCCACGTACGCTTTCGTACGCTTTTGGGGGCACCCCCTCCC CCTCAAGAGCGTAGGTACTTTTTGAATGGTCCCAAACCTCTAATTTTGTA AGACTACAATGAATAAGTCGCATAAATCGTTTTGATTGTATTGAGTTAGA TTTCATCTCATCAAGTCAAATTGGAACCCATGGCACCTTCTTACGCTTCT TTATGTTCATAAATATGTTAAATTCATTCACTTTAGCCTAAAGAGGTTCA GTTCGCGTCTTTGTTCAAGTTTTTTATCTTTCAAATATGTAGGTCACCGA AGCGCTCGAAGAAGAAAAAGTGACCCATGTGATAGGTAAGTTAGGCTATT ACTTGCAGAGTGCAGTTTGGGTTGAACTGACTAGACTTTCTTTAAAAGGT GATCAGGAACCACTGCTAGTGCTCAGGTTATCGGATCGTGGCAGCATGGA GGATATATATACAGAGATAAAGATTTATCCCAAAAACGACATTCTTTGAA ACTTTCAAACGGGACATTCAGTGATTATAGAATATTATGAACATTTTTTA GATTTTTTCTTTAATTTTGTAAAATTTGTACAAAGAAGGTGAAAGGAAAG AATATTTTTACCAATTTATATCCATTTGTGTTTACGTTCTTCTTACAAAT ATTGAAAAGGAAAATTGACAACTTCCAATTCTTCAGAATTCGAACAAGTT TGAAGAAATTGATTTTCGGATATTCTAGAATAAAACATCTCTACAAAAAC TTTCGATTTTGGATTGTTTATTTCGACAACAATTTACAATAAATTATAAA GCAATAGATTAGTATTTAAATATATTAGTATCTGTTCATTATAACATTAT TTTTGCTTCTGCTGCCTGCTACGGCACGGAACCAAATCTTGTAGTAGTAG CGATTATTGTGATACACTCTCAGTGTCTTTGTGTTCTCACTGTTCCCCAG CTCCATATGTTCTAATGACGTCACGGATAGGTGCTCGGCACATGGGGCAA GTCTGTCCGTTCATTTTCAAATGTAATGCACAAGAGTGACATGCGCACAT GTGTCCACATTGATAGAAAACTGTATCAATTGATTGGTCGATGCAAATAG CACATTGTCCTCTCTGGACAGGTGTTGTGTGGTTGTTTTGTTGAATGTTC AGGATGGCACTTGACGTTGGACGATCTTGTTGGTCTAAAACAGAATGCAA ATTTGTATTAAGAGTTATGTTACCGAATACTTCCAGTAACATCTGTGCAA TTCAGCCCGACAGAAAGAATTCAATAATATTGGGTTGGTACGATGATGAT AATAGTAGTAAGATTAATTTACGTTGGAAAATTGTTGCGAATTCTGTGTT TAAGGTTCAAAAACCGTAGATAACTTCTTTCATTGAAGAAACTTACCTGG TTTACTAGCGAGATAGTCGCTCATGAAAGCCTGAAAGACAGCTGCAACTT CTTGTCTAACAGCGCGTTGAGTATCAAGTTGTACTTCCATCGTCATTCGA AGAAGTTGTTTCATTTCGTTCAGTTCTTGTTTAAGCTCTTGAATCTCGTG TGGTGAGCTGGCTCCTCTTTCGTTGATTGTTCTTAATGACGTTGGGCGTT GAATCGGAGGACGTTGTCTTGGTTGTTGAGAGCGAACGAATGGGCGTGGC GTTGTGGTGTTTCCACCTAATGACTCCACACGTTGCTGAAATAGGCAAAC TTAATTAATAACTAAATTTTCAAACTTGATTTTTGTATGTCACGCTTTGA TTAACTTGGTTGGTTTTTTAAAAGCAGAAAAAATGTCTTAGATTAATGTA ATTGTAATTTCGAAAGGTTTGGATGTTAAGATTCTTACCTGAACCATATT CTCCAATTCATCACGGAAATCGTCTTGTAGCATATTACTGACAACTTGTA GACTTTGTAGACGAGTGATGTCAGTAGCTATGCTTTCTGTTAAGATTTGT ACACTTGCTTGCACTGTTGATTGAAGTAATGCTGGATCAACCAAAGGCGT TGTCGAAGGTGTGGATGTCCCAGGTAATGGTGGTGGCGGTGGCGGGTTCG ATGTTCGGCTGGCGGGAGTAGATTCTTGAGGTTGTACACTGTAAAATAAA TATTAATAATGTCGAATGACATTTAAGTATCTTAGCAACAAAACTTTGAA AACAAGAACCAAGGCGATTTTATGCATTTAGAGAAGTGTATATTAAAATA TCTTTCTTGGGAAATTTAACCCAGCGCATAGAGAAGTCATCTGTAAGTTA ATTAGAGAGTTTTTTTTACCTTGACTGTTGTCTTTGTTGTCGTTGAGCGA TCTGTCTACTGAGTTGGTCTCGGAAAGATCCTCGTGCTGGTTCCGTTCGA TTATTGTCATACCTTCTTGGGACGGGTCTTCTAGTCCCTCTTGTATTGCT GTTTGAGCTTCTTGCTGTTGGTGCAGTAGACCGTCCACTTAATGTCGCTT CAAGCTGACGTCGAAATCCATTTTGTATCGCGGAGCTTACTCTGCTAAGT TGTAGAAGGGATTGGACGTCATTTGCGACTGTTTCAGGTCTGTTTTGAGC TTCTTCTTCGGCCCTTTCTTGTTGCGTTGGCNTGTTTCAGGTCTGTTTTG AGCTTCTTCTTCCGCCCTTTCTTGTTGTGTTGGACCATTGATTGCACGCT CAAAGAAGTTCTCGATACTAGCTCTCGCATTACCCCCTGTTACTGGTCGC TCTCCAAGTTGGATTCTTCTAAGTTCTAAAAATCTTTCACTGTAAAGAAA AAATAGATTTTATGATTGATTCGGAAATTTTCGAAATATTTATCACGCCT TTTTTCCTTTTCGTTATGATCGAATAAGATAATATATAACTAGCGGTCCC AGACCTTTAACTGATTAAAATGATAAATCATATTTAGGACCTTCAAATCC GTTGGGAAAGTATCATTTACTCATACTTCTAATATCTTTCATCGTGGAAT AACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031217XLOC_031217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049122-exon-scaffold_152-1575043694:109239..109388TCONS_00049122-exon-scaffold_152-1575043694:109239..109388Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:103891..104460TCONS_00049122-exon-scaffold_152-1575043694:103891..104460Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:103472..103635TCONS_00049122-exon-scaffold_152-1575043694:103472..103635Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:102686..103136TCONS_00049122-exon-scaffold_152-1575043694:102686..103136Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:102276..102335TCONS_00049122-exon-scaffold_152-1575043694:102276..102335Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:101346..101985TCONS_00049122-exon-scaffold_152-1575043694:101346..101985Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1575043694:97885..100546TCONS_00049122-exon-scaffold_152-1575043694:97885..100546Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:109239..109388TCONS_00049122-exon-scaffold_152-1510915933:109239..109388Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:103891..104460TCONS_00049122-exon-scaffold_152-1510915933:103891..104460Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:103472..103635TCONS_00049122-exon-scaffold_152-1510915933:103472..103635Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:102686..103136TCONS_00049122-exon-scaffold_152-1510915933:102686..103136Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:102276..102335TCONS_00049122-exon-scaffold_152-1510915933:102276..102335Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:101346..101985TCONS_00049122-exon-scaffold_152-1510915933:101346..101985Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1510915933:97885..100546TCONS_00049122-exon-scaffold_152-1510915933:97885..100546Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:109239..109388TCONS_00049122-exon-scaffold_152-1491911889:109239..109388Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:103891..104460TCONS_00049122-exon-scaffold_152-1491911889:103891..104460Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:103472..103635TCONS_00049122-exon-scaffold_152-1491911889:103472..103635Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:102686..103136TCONS_00049122-exon-scaffold_152-1491911889:102686..103136Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:102276..102335TCONS_00049122-exon-scaffold_152-1491911889:102276..102335Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:101346..101985TCONS_00049122-exon-scaffold_152-1491911889:101346..101985Clytia hemisphaericaexon
TCONS_00049122-exon-scaffold_152-1491911889:97885..100546TCONS_00049122-exon-scaffold_152-1491911889:97885..100546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:97885..109388 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.44386e-05 0.00341597 0.039608 0.000924126 2.09714e-10 0 0.00301626 0.0161928 2.9584 2.5014 6.03383 4.71543 6.76032 7.13853 5.06011 7.82825 4.15998 7.0654 6.03358 5.88911 2.54952 2.93741 3.61446 2.61114 2.3212 1.20786e-07 1.69342 1.32314 7.67434 0.192557
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top