TCONS_00004792 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004792
Unique NameTCONS_00004792
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length898

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004792 ID=TCONS_00004792|Name=TCONS_00004792|organism=Clytia hemisphaerica|type=transcript|length=898bp
AGGCAGTTGGTTATTAGTCGTGTTTTGTTcagttcttataagaaaatatt
cttaagaaatGGTTACTATGACATTAGCCAATATTAAGTTGCAGAAGTCG
AAGCAAAATATTGCTCGCCTTTCAAAAGaattagaaattttaaaaattaa
gcaTACAATCGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGATTCgtc
attataaaaaagaaaacgcaGATTTGTGCGTTAAACTTGCAAAGGAGAAA
GCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAA
GTCACCTCAACCGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTA
AATCACGGGACTGGCGCTTGAATGACGCATCACAGAAAATTACTGTCGTA
AGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAACAACTATCATCACA
AAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGAAGCCTGTACAAA
TGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATATATGCCTGGC
TTTGGATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTT
GAACAGtgcCAAATCGCAGGAAAAAATCAATCGAAAAATTATCAAGCCAA
TAAAGAAAGagGCACCTGTAAATACTTCTTACGAAAGCCAATTGGTTGAC
ACCCCTGCATTGCCCATCACTGTGGCTAAACCAAGCTGTGTCAAAATTGA
CAGTGTTAACTGGGCAGACTTCgaatatAACGATGACCAGAAGATAGACT
ACAATGAAATCATCCAATTTTGAATTTCCTCTGccaaaaaattgtatatt
ttgtatatttaatatttcatactgtaaatagttcttttttaatttctt
Run BLAST on NCBI

protein sequence of TCONS_00004792-protein

>TCONS_00004792-protein ID=TCONS_00004792-protein|Name=TCONS_00004792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MVTMTLANIKLQKSKQNIARLSKELEILKIKHTIASNDCLAKESKIRHYK
KENADLCVKLAKEKAVNASLKRIPKPKQIVKSPQPIVESKGTSEVVFKSR
DWRLNDASQKITVVREVCGGPEPIQKQLSSQNALQPKGKLLIPKPVQMNG
YLFVPAEYVQYMPGFGSLEVAKVKCSQDFRLNSAKSQEKINRKIIKPIKK
EAPVNTSYESQLVDTPALPITVAKPSCVKIDSVNWADFEYNDDQKIDYNE
IIQF
Run BLAST on NCBI

transcript from alignment at sc0000048:374296..378599-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004792 ID=TCONS_00004792|Name=TCONS_00004792|organism=Clytia hemisphaerica|type=transcript|length=4304bp|location=Sequence derived from alignment at sc0000048:374296..378599- (Clytia hemisphaerica)
AGGCAGTTGGTTATTAGTCGTGTTTTGTTCAGTTCTTATAAGAAAATATT
CTTAAGAAATGGTTACTATGACATTAGCCAATATTAAGTTGCAGAAGTCG
AAGCAAAATATTGCTCGCCTTTCAAAAGAATTAGAAATTTTAAAAATTAA
GCATACAATCGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGATTCGTC
ATTATAAAAAAGAAAACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAAG
TAAGTACTTTATTTTGTTGACCTCATTAGCCTTTTATTATTTCATTCGTA
CGTCAACGAATTAGAATCTTATTGTAACAGACCTTGATTTTAGTTAAAGC
ATTCCAGTTTGAACTTAAAATTCAAATTATCGAGGTTGGCTTACTGTTCG
ATTATCACATTTGGAGCCCCATTTTCTGGCATTTGTGAATCCATTTTTTC
TTCACTTATTTACACCCCTGTGTCATAGACCCGATGGGACACTCGACCCA
CTGGAATATTTGGCCAAAAATTCGTCCCAGTGGGGAGAATAGCCATCCCT
ACTTGGATATCGAAAGAAATTTTCATCCCCGTTATAGGAAGAAGTTGCTG
CAAGACAGGGGTGTCATATTTGCAATCATCCTGATGTAATGTCGTCTTTT
CTTTTTAGAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCA
GATTGTCAAGTCACCTCAACCGTAAGAATTTATAAAAACTCTGATGTTTT
AAAAGTATGTAGGCACTGTCGATGGTTCCGAGCGAATATACCCATTTGTT
ATGATTTATTTCTACTGGTGTTATATCTTTCCGGAGAGTGGGTGGTACAT
TTGGCGGCCAATGACTTAACCTTTCCCCTATTTAGCTTAAAGTTACACAT
TTTGAATTTTTTCAATTAGTCTCAGTTTAATTAATCAAACTTTTCTTTAC
AGGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAATCACGGGA
CTGGCGCTTGAATGACGCATCACAGTAAGTTTCAAGGGGACATTTTCAGA
TTGATAATAGGAATTAGAATATGGTGTTCCAGGAATAATTCACCACAGTG
TCAATAAGTAATGAATACTTCAAAACGGNCAGTGCCGTAGCAACTGTGGG
GGCAAGGGGGGGGGGCTATGCCCCCCAATAATTTTTTCAAAAATGGTTAT
TTTGCAAAATGTAAAGTTTTTCTTTTTTAATTTCATCATAATTGTCTTTA
TGTGCATGTTTGAGTGTATTTTTAAGCAATCTAGAGCTCAAATTTTCAAA
ATTTTCACTAAACTTCAGCCCCCCCCCCAATATGAAAATGCTTCCTACGG
CACTGTAACAAACAGGTCTACTTCAATAATGGTGATTCTTGTATTAGGAA
AATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAAC
AACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCG
TAAGTAGTATCAAACTTTCACTGAAACAAGTTTTTTTTCTTGATATTACC
CTTGTTCTCCTTTTTGGTTAGAACTTTTATTGAATCAAATGTTTCACTGT
TCGAGTTCAGATTAGATGTGGACTCAGAAACGCCCTAAAATTACATGGTT
TCTAAGGACAGACAGCTTCATACTCCTACAAGGGTAGTTTTTTCTATCTA
ACCTTATTCTATCGGCTGTTTTAATGCCAGATATGATAACATACATGGAT
GCAATGTTGCTACCTACTTTTAACGATGTTTCGATTTCATTTTTAGGAAG
CCTGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATA
TATGCCGTAAGTTGAATAGTGTTTTGATTTTCTTTTTAACAATTTTTCCA
TTTTTTAGCTACTAGCGGTATTATAAAATGATTTTCTATGTACATATTAT
TTGTTTTCATCGAGGCCTAAACTTCGGTGATTCATAATGAAACAATTATC
TTTTGAGCACTAAATTTTGCAGAATATTAGCACTTTACCCAGCCACTTAA
TATATTCAAAGAATGATTGTTTATTTATTTTTCTCTTGTAGTGGCTTTGG
ATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACA
GGTAATTGATAAAGTTTTAGGTTCAAGATGACAGAAAAGGGGGTTCGGAC
GAAGAGCAAGATTGGGGGAAACGGTTCCTTTTAGATAGAATAGACCTTAT
CATAAATGACCTAACGAACATCACTTGCTTCTTTTTGAAGTTATTACCAT
GGTGATTAACTCCCAATGGATTTTATTAAAACTACTTCCTATTCATGAAA
TAATCATTTAATGTCTCAAAGGTCATAATCACCATAGTAATTGTTTGAAT
ACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAGGGTTTATTCACA
GGGCTGACAGTGATTTGATTTTGGAAAAATTTCAAGGTCGACCCCATTCA
TTGGTTCTGAGGATCAAAATAATTCTTCTAGAGTCACAAAAATTGCTCAT
TATGAAAATCATGAACTCTTATCTATTCTTTCTTTTTCAGTGCCAAATCG
CAGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAGAAAGGTAAATT
CATCTTTAGTGTGCTTATCAGTATTTTGAAAAGTTTAGTTATACCCAGTG
GGAGAATTTTTCGTCTTTGCCCATTTCAAAATGCAATGTATCCAAAGAAG
AGAGTCATAATAATCTTACTCCTTTGCGCACGCTGTTTCTTTTGAAGGCA
TGATTTTCAGTCACTTCGAGCAATTTGAAGTCCTCAAAACTTGTAGCTTT
TGATTTAGAAGATGATTTTGGTACCATTCAAAAGTTCTTGTTATACTCTT
TCTAAAAACATTTGGTTTATGCCCCTTTAAATAAAGTGGTCAGGAGCTAT
GGCCTCATTATTTTGGCTTGTTTTGGACGCATATACGCGTCCCTTGTGGT
CTAAGGGTTAATGGGTACTCTTCTCTCTTATCTTGGCAAAAAACTTCACA
TCTTCCTTCACAAACAAAATTGATCTTCTTTATTTTTTCAGAGGCACCTG
TAAATACTTCTTACGAAAGCCAATTGGTTGACACCCCTGCATTGCCCATC
ACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTGTTAACTGGGCAGA
CTTCGAGTAAGTTTTATTTTTTATTCTATCCTGATCGACTCAACTTAAAA
GCCAAGAAATGTAGAACTAAAATCCCTAGCTCCAGACGGCATTTTTCATT
TGATTTAAAACCCTATTAGCCCCAGGGGGGGGGGGTAGAATCTACCACGC
TGGAGTTATTTTGTGTATATCTCAGAGAAAAAATTTTTAAACGACTTGAA
ACTTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTGCAAAATTTT
AGGGTTATAGCTTGTCCAGATCAAGTTTTGTGACTTTATTGTGAAACATG
ACATAAAACCCAGCTAAAATCGCTTAAAACTCAAATTTTAAAGTGCTGAT
AACTTTTGAACTATTTATTCAATCATCATTTATGACGTCGTCAAATTTTT
AAAATCTTACTCATTTTCAGCACAGATTTTAAGATAAAATCTTCATGGAA
ACTGCAAAACCGGCAATTATGTTAAAGAAGAACCTTTTATCTTTCAGAAT
TTTCAAACAGAATCTAAATATCATTATTGGTTCGATTGTAATAGACATTT
TTGTAAACAATATATTTTGGCTTTTTGCCGACAGGTGGAAAATTTGGGAT
GATGTCATCGGTTTTTGAATGACGTCATCAAATTTTTTTTTTGTTCCAGG
AAATGTGTGTCATGATGGAGAACATCTGTACCAAATTTCATGACCGTAGC
ACTCCTAGATCAAAAATAATCAAGGGTGGTAGATTCTACCCCCCCTGGGG
ATACAAAAGTCAAAAAAGCTTGGGGCTAATAGGGTAACTGATTTAACTCG
TTAACAAATTTCAACCGAAATCCGTTTATTAAGATTCTGAAATCCAATAG
AAATCCAAGGTGTACTAGTTTTGAGTTGAAATACAGAACTTTAATACACA
TAACTTCGGATACTATTTTACTTCTTTTGGCATAGAAAATGTTTTTCATT
GTTTTTCTCATTGTTTTTTTTTTTCTTCAGATATAACGATGACCAGAAGA
TAGACTACAATGAAATCATCCAATTTTGAATTTCCTCTGCCAAAAAATTG
TATATTTTGTATATTTAATATTTCATACTGTAAATAGTTCTTTTTTAATT
TCTT

Coding sequence (CDS) from alignment at sc0000048:374296..378599-

>TCONS_00004792 ID=TCONS_00004792|Name=TCONS_00004792|organism=Clytia hemisphaerica|type=CDS|length=6885bp|location=Sequence derived from alignment at sc0000048:374296..378599- (Clytia hemisphaerica)
ATATAACGATGACCAGAAGATAGACTACAATGAAATCATCCAATTTTGAA
GGCACCTGTAAATACTTCTTACGAAAGCCAATTGGTTGACACCCCTGCAT
TGCCCATCACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTGTTAAC
TGGGCAGACTTCGATGCCAAATCGCAGGAAAAAATCAATCGAAAAATTAT
CAAGCCAATAAAGAAAGTGGCTTTGGATCACTCGAAGTTGCAAAGGTGAA
ATGTTCCCAAGACTTCCGGTTGAACAGGAAGCCTGTACAAATGAACGGGT
ATCTTTTTGTGCCGGCCGAATACGTGCAATATATGCCGAAAATTACTGTC
GTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAACAACTATCATC
ACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGATTGTCGAAT
CAAAAGGTACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCTTGAAT
GACGCATCACAAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAA
GCAGATTGTCAAGTCACCTCAACCATGGTTACTATGACATTAGCCAATAT
TAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCAAAAGAATTAG
AAATTTTAAAAATTAAGCATACAATCGCCAGCAATGATTGCTTGGCAAAA
GAATCAAAGATTCGTCATTATAAAAAAGAAAACGCAGATTTGTGCGTTAA
ACTTGCAAAGGAGAAATATAACGATGACCAGAAGATAGACTACAATGAAA
TCATCCAATTTTGAAGGCACCTGTAAATACTTCTTACGAAAGCCAATTGG
TTGACACCCCTGCATTGCCCATCACTGTGGCTAAACCAAGCTGTGTCAAA
ATTGACAGTGTTAACTGGGCAGACTTCGATGCCAAATCGCAGGAAAAAAT
CAATCGAAAAATTATCAAGCCAATAAAGAAAGTGGCTTTGGATCACTCGA
AGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACAGGAAGCCTG
TACAAATGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATATATG
CCGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCA
AAAACAACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAA
TCCCGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAATCACGG
GACTGGCGCTTGAATGACGCATCACAAGCCGTCAACGCATCGTTGAAAAG
AATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTCAACCATGGTTACTAT
GACATTAGCCAATATTAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCC
TTTCAAAAGAATTAGAAATTTTAAAAATTAAGCATACAATCGCCAGCAAT
GATTGCTTGGCAAAAGAATCAAAGATTCGTCATTATAAAAAAGAAAACGC
AGATTTGTGCGTTAAACTTGCAAAGGAGAAATATAACGATGACCAGAAGA
TAGACTACAATGAAATCATCCAATTTTGAAGGCACCTGTAAATACTTCTT
ACGAAAGCCAATTGGTTGACACCCCTGCATTGCCCATCACTGTGGCTAAA
CCAAGCTGTGTCAAAATTGACAGTGTTAACTGGGCAGACTTCGATGCCAA
ATCGCAGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAGAAAGTGG
CTTTGGATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGT
TGAACAGGAAGCCTGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGAA
TACGTGCAATATATGCCGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGG
ACCTGAACCTATCCAAAAACAACTATCATCACAAAATGCACTTCAACCAA
AAGGCAAATTGCTAATCCCGATTGTCGAATCAAAAGGTACATCTGAAGTA
GTATTTAAATCACGGGACTGGCGCTTGAATGACGCATCACAAGCCGTCAA
CGCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTC
AACCATGGTTACTATGACATTAGCCAATATTAAGTTGCAGAAGTCGAAGC
AAAATATTGCTCGCCTTTCAAAAGAATTAGAAATTTTAAAAATTAAGCAT
ACAATCGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGATTCGTCATTA
TAAAAAAGAAAACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAAATATA
ACGATGACCAGAAGATAGACTACAATGAAATCATCCAATTTTGAAGGCAC
CTGTAAATACTTCTTACGAAAGCCAATTGGTTGACACCCCTGCATTGCCC
ATCACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTGTTAACTGGGC
AGACTTCGATGCCAAATCGCAGGAAAAAATCAATCGAAAAATTATCAAGC
CAATAAAGAAAGTGGCTTTGGATCACTCGAAGTTGCAAAGGTGAAATGTT
CCCAAGACTTCCGGTTGAACAGGAAGCCTGTACAAATGAACGGGTATCTT
TTTGTGCCGGCCGAATACGTGCAATATATGCCGAAAATTACTGTCGTAAG
AGAAGTTTGTGGTGGACCTGAACCTATCCAAAAACAACTATCATCACAAA
ATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGATTGTCGAATCAAAA
GGTACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCTTGAATGACGC
ATCACAAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGA
TTGTCAAGTCACCTCAACCATGGTTACTATGACATTAGCCAATATTAAGT
TGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCAAAAGAATTAGAAATT
TTAAAAATTAAGCATACAATCGCCAGCAATGATTGCTTGGCAAAAGAATC
AAAGATTCGTCATTATAAAAAAGAAAACGCAGATTTGTGCGTTAAACTTG
CAAAGGAGAAATATAACGATGACCAGAAGATAGACTACAATGAAATCATC
CAATTTTGAAGGCACCTGTAAATACTTCTTACGAAAGCCAATTGGTTGAC
ACCCCTGCATTGCCCATCACTGTGGCTAAACCAAGCTGTGTCAAAATTGA
CAGTGTTAACTGGGCAGACTTCGATGCCAAATCGCAGGAAAAAATCAATC
GAAAAATTATCAAGCCAATAAAGAAAGTGGCTTTGGATCACTCGAAGTTG
CAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACAGGAAGCCTGTACAA
ATGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATATATGCCGAA
AATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAAC
AACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCG
ATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAATCACGGGACTG
GCGCTTGAATGACGCATCACAAGCCGTCAACGCATCGTTGAAAAGAATTC
CCAAGCCCAAGCAGATTGTCAAGTCACCTCAACCATGGTTACTATGACAT
TAGCCAATATTAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCA
AAAGAATTAGAAATTTTAAAAATTAAGCATACAATCGCCAGCAATGATTG
CTTGGCAAAAGAATCAAAGATTCGTCATTATAAAAAAGAAAACGCAGATT
TGTGCGTTAAACTTGCAAAGGAGAAATATAACGATGACCAGAAGATAGAC
TACAATGAAATCATCCAATTTTGAAGGCACCTGTAAATACTTCTTACGAA
AGCCAATTGGTTGACACCCCTGCATTGCCCATCACTGTGGCTAAACCAAG
CTGTGTCAAAATTGACAGTGTTAACTGGGCAGACTTCGATGCCAAATCGC
AGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAGAAAGTGGCTTTG
GATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAAC
AGGAAGCCTGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGAATACGT
GCAATATATGCCGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTG
AACCTATCCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAAGGC
AAATTGCTAATCCCGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATT
TAAATCACGGGACTGGCGCTTGAATGACGCATCACAAGCCGTCAACGCAT
CGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTCAACCA
TGGTTACTATGACATTAGCCAATATTAAGTTGCAGAAGTCGAAGCAAAAT
ATTGCTCGCCTTTCAAAAGAATTAGAAATTTTAAAAATTAAGCATACAAT
CGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGATTCGTCATTATAAAA
AAGAAAACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAAATATAACGAT
GACCAGAAGATAGACTACAATGAAATCATCCAATTTTGAAGGCACCTGTA
AATACTTCTTACGAAAGCCAATTGGTTGACACCCCTGCATTGCCCATCAC
TGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTGTTAACTGGGCAGACT
TCGATGCCAAATCGCAGGAAAAAATCAATCGAAAAATTATCAAGCCAATA
AAGAAAGTGGCTTTGGATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAA
GACTTCCGGTTGAACAGGAAGCCTGTACAAATGAACGGGTATCTTTTTGT
GCCGGCCGAATACGTGCAATATATGCCGAAAATTACTGTCGTAAGAGAAG
TTTGTGGTGGACCTGAACCTATCCAAAAACAACTATCATCACAAAATGCA
CTTCAACCAAAAGGCAAATTGCTAATCCCGATTGTCGAATCAAAAGGTAC
ATCTGAAGTAGTATTTAAATCACGGGACTGGCGCTTGAATGACGCATCAC
AAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTC
AAGTCACCTCAACCATGGTTACTATGACATTAGCCAATATTAAGTTGCAG
AAGTCGAAGCAAAATATTGCTCGCCTTTCAAAAGAATTAGAAATTTTAAA
AATTAAGCATACAATCGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGA
TTCGTCATTATAAAAAAGAAAACGCAGATTTGTGCGTTAAACTTGCAAAG
GAGAAATATAACGATGACCAGAAGATAGACTACAATGAAATCATCCAATT
TTGAAGGCACCTGTAAATACTTCTTACGAAAGCCAATTGGTTGACACCCC
TGCATTGCCCATCACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTG
TTAACTGGGCAGACTTCGATGCCAAATCGCAGGAAAAAATCAATCGAAAA
ATTATCAAGCCAATAAAGAAAGTGGCTTTGGATCACTCGAAGTTGCAAAG
GTGAAATGTTCCCAAGACTTCCGGTTGAACAGGAAGCCTGTACAAATGAA
CGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATATATGCCGAAAATTA
CTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAACAACTA
TCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCGATTGT
CGAATCAAAAGGTACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCT
TGAATGACGCATCACAAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAG
CCCAAGCAGATTGTCAAGTCACCTCAACCATGGTTACTATGACATTAGCC
AATATTAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCAAAAGA
ATTAGAAATTTTAAAAATTAAGCATACAATCGCCAGCAATGATTGCTTGG
CAAAAGAATCAAAGATTCGTCATTATAAAAAAGAAAACGCAGATTTGTGC
GTTAAACTTGCAAAGGAGAAATATAACGATGACCAGAAGATAGACTACAA
TGAAATCATCCAATTTTGAAGGCACCTGTAAATACTTCTTACGAAAGCCA
ATTGGTTGACACCCCTGCATTGCCCATCACTGTGGCTAAACCAAGCTGTG
TCAAAATTGACAGTGTTAACTGGGCAGACTTCGATGCCAAATCGCAGGAA
AAAATCAATCGAAAAATTATCAAGCCAATAAAGAAAGTGGCTTTGGATCA
CTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACAGGAA
GCCTGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAAT
ATATGCCGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCT
ATCCAAAAACAACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATT
GCTAATCCCGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAAT
CACGGGACTGGCGCTTGAATGACGCATCACAAGCCGTCAACGCATCGTTG
AAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTCAACCATGGTT
ACTATGACATTAGCCAATATTAAGTTGCAGAAGTCGAAGCAAAATATTGC
TCGCCTTTCAAAAGAATTAGAAATTTTAAAAATTAAGCATACAATCGCCA
GCAATGATTGCTTGGCAAAAGAATCAAAGATTCGTCATTATAAAAAAGAA
AACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002709XLOC_002709Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004792-exon-sc0000048-1575043694:378351..378599TCONS_00004792-exon-sc0000048-1575043694:378351..378599Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:377879..377941TCONS_00004792-exon-sc0000048-1575043694:377879..377941Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:377576..377647TCONS_00004792-exon-sc0000048-1575043694:377576..377647Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:377101..377202TCONS_00004792-exon-sc0000048-1575043694:377101..377202Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:376744..376803TCONS_00004792-exon-sc0000048-1575043694:376744..376803Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:376449..376508TCONS_00004792-exon-sc0000048-1575043694:376449..376508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:375957..376009TCONS_00004792-exon-sc0000048-1575043694:375957..376009Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:375394..375508TCONS_00004792-exon-sc0000048-1575043694:375394..375508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1575043694:374296..374419TCONS_00004792-exon-sc0000048-1575043694:374296..374419Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:378351..378599TCONS_00004792-exon-sc0000048-1510915933:378351..378599Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:377879..377941TCONS_00004792-exon-sc0000048-1510915933:377879..377941Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:377576..377647TCONS_00004792-exon-sc0000048-1510915933:377576..377647Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:377101..377202TCONS_00004792-exon-sc0000048-1510915933:377101..377202Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:376744..376803TCONS_00004792-exon-sc0000048-1510915933:376744..376803Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:376449..376508TCONS_00004792-exon-sc0000048-1510915933:376449..376508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:375957..376009TCONS_00004792-exon-sc0000048-1510915933:375957..376009Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:375394..375508TCONS_00004792-exon-sc0000048-1510915933:375394..375508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1510915933:374296..374419TCONS_00004792-exon-sc0000048-1510915933:374296..374419Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:378351..378599TCONS_00004792-exon-sc0000048-1491911889:378351..378599Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:377879..377941TCONS_00004792-exon-sc0000048-1491911889:377879..377941Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:377576..377647TCONS_00004792-exon-sc0000048-1491911889:377576..377647Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:377101..377202TCONS_00004792-exon-sc0000048-1491911889:377101..377202Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:376744..376803TCONS_00004792-exon-sc0000048-1491911889:376744..376803Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:376449..376508TCONS_00004792-exon-sc0000048-1491911889:376449..376508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:375957..376009TCONS_00004792-exon-sc0000048-1491911889:375957..376009Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:375394..375508TCONS_00004792-exon-sc0000048-1491911889:375394..375508Clytia hemisphaericaexon
TCONS_00004792-exon-sc0000048-1491911889:374296..374419TCONS_00004792-exon-sc0000048-1491911889:374296..374419Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004792-proteinTCONS_00004792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:374296..378599 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.566408	0.688055	0	0	5.76347	3.84745	3.80396	4.1524	1.47924	2.51525	2.7638	2.76345	1.16435	1.01334	0.559595	0.909949	1.08233	0.871633	0.308589	0	0.39756	0.780591	0	0.1804	1.3755	2.07228	0.847263	0	0.34291	0.0793642
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004792 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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