BlTCONS00089320 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00089320
Unique NameBlTCONS00089320
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000114:567895..569706-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00089320 ID=BlTCONS00089320|Name=BlTCONS00089320|organism=Branchiostoma lanceolatum|type=mRNA|length=1812bp|location=Sequence derived from alignment at Sc0000114:567895..569706- (Branchiostoma lanceolatum)
TAACGCCATCACAGGATATATATCCAGGACTTCAGTAGACGGTACGTCAT TGCCAATCTGAACAACTTAACAACGGTCCTTCTTCAGGGCACAATCATCT GCTGCTATCCTATTTTCAGCTGTTGAAAGAAAGGTGAGATATAACAAGGT GCAAAGTGCTGCTGAAGAAACAAGGGCGATAAGCCCCCGGAGTTTTGCAT GGCTATACTCAGGTGCAATGTGACACGTCATCATAAGGCTTTTTTTTCAG AAGTCCTTTGAGTTATAGTTCAGCATGAAGCAAAATGGTGGGTTGTGGAA AGATGACAAAATGTTTTTCTCTAACTGGATATTTTCTCTCAATAAGCTGA AATGTGAACAGTCCATGAAACATGACAGTCGGTTTTGGTGATAAAAATGC ATTGCATCATAAAAAGAGGTAGAGCTGTTTTCAAAATAATATCAATCATT GCTGTAGTCTGAATATTGCACCTCCTTTCTTGTGAACAACAAGAAATAAC TGAATAATTGTGATGAAAGTATGCAATGTACTTATTTGCATGCATAGAAT ATTGTAATAGCAGCAGTGTTTATTTTCATATCAAGTAACCCATCAACTTT TCGTTCCCGTCACAGAAGACGACATTCAAGAGACCATGAAGAACGCAGTT ACCCCGCGTGCCGATGTGCCACGCCGAAGGGCGGTTTTACCTGCTACACA GATACAGATAGAGACGGTGCGTGCATCCACCGGACTGTGGGATCGCTTCC TGTTAGCCTGGAACTCCAACCCATGGCAGATGCGTCTTATGCTGTTCTCC CTACTCTTATATATTGCTGATGTTTTTACGGATTTGATGCTGGCCGTGCA GTACTACAGCAGCGGGGATTTGTATTGGTGTGGCTGGACACTGGGGTTTG TGATGGCACTACCAACCATAATGAACTTCCTTTTATTACTATTTGGCATT GACATCCTAGATGTCAAACTATCAGTGAATAAGTGGGAGAAGTGCCTGTT GAACTTCCTACATTTTGTCTTACCTTGGAAGTATTTTGAAATTATCAATA TGTTATCTTGTGGCAAAGACGTTGAAGACAATTTGAAGTTAAAACTGTCC AAAATGCACCTGTATGAAGCCATGTTGGAGAGCGTCCCTCAGCTGTGTCT ACAAATCTACATCATGGAGACCACACACGAGCAGGTCAGTGTCCTGAAGG TCATCACCATGGTGATATCACTGGTGGCAGCAGTTAGGACCTTGTACACG TGTATGTACCATGAAAGGATAGATTGTAATGATGTAATTGACTTTTTCGG TGACGTTTACCCGATAATCGTTTGGAAAGTGGTGGAATTGACTATGCTTG TGTTGGCCATAGCGATTGGTGCATCCGCCCTGAAACAGTGGGTCATACTT CCCCTTGGAATACACTGGCTGCTGATGGCATTTTTCATAGCAAACGAATC GCCCATAACAGACTATAAAGATCTCATTGAAGGAGTTCTTTTCTTGTCTG TAGTTACATTATGTTTTCCCCGAGAATATGTATACATAGTGATTTATCTA TGGTTCGCTTTTAGTAGCGTCATAAGACTACGTGGATTTCTCATCTTGCA GGGAGCAAGACTGCAGTGGTACAATGGTCCAGCTGTATTGATCGAATTGG TAGGCACAGTGATGGGCGCAGTGTTTTCTGCATGTGTACTTTTGGGATAC TTGCCAAGAGAACTGTTCCGGGAAATATTTGGTATAGAGATAGATCAAGA GAACATCTAATCATTCAAACAAGTAGTTTGTTCCTTGCTACTGTTGACTG TATTGTTGTTCC

Coding sequence (CDS) from alignment at Sc0000114:567895..569706-

>BlTCONS00089320 ID=BlTCONS00089320|Name=BlTCONS00089320|organism=Branchiostoma lanceolatum|type=CDS|length=1125bp|location=Sequence derived from alignment at Sc0000114:567895..569706- (Branchiostoma lanceolatum)
ATGAAGAACGCAGTTACCCCGCGTGCCGATGTGCCACGCCGAAGGGCGGT
TTTACCTGCTACACAGATACAGATAGAGACGGTGCGTGCATCCACCGGAC
TGTGGGATCGCTTCCTGTTAGCCTGGAACTCCAACCCATGGCAGATGCGT
CTTATGCTGTTCTCCCTACTCTTATATATTGCTGATGTTTTTACGGATTT
GATGCTGGCCGTGCAGTACTACAGCAGCGGGGATTTGTATTGGTGTGGCT
GGACACTGGGGTTTGTGATGGCACTACCAACCATAATGAACTTCCTTTTA
TTACTATTTGGCATTGACATCCTAGATGTCAAACTATCAGTGAATAAGTG
GGAGAAGTGCCTGTTGAACTTCCTACATTTTGTCTTACCTTGGAAGTATT
TTGAAATTATCAATATGTTATCTTGTGGCAAAGACGTTGAAGACAATTTG
AAGTTAAAACTGTCCAAAATGCACCTGTATGAAGCCATGTTGGAGAGCGT
CCCTCAGCTGTGTCTACAAATCTACATCATGGAGACCACACACGAGCAGG
TCAGTGTCCTGAAGGTCATCACCATGGTGATATCACTGGTGGCAGCAGTT
AGGACCTTGTACACGTGTATGTACCATGAAAGGATAGATTGTAATGATGT
AATTGACTTTTTCGGTGACGTTTACCCGATAATCGTTTGGAAAGTGGTGG
AATTGACTATGCTTGTGTTGGCCATAGCGATTGGTGCATCCGCCCTGAAA
CAGTGGGTCATACTTCCCCTTGGAATACACTGGCTGCTGATGGCATTTTT
CATAGCAAACGAATCGCCCATAACAGACTATAAAGATCTCATTGAAGGAG
TTCTTTTCTTGTCTGTAGTTACATTATGTTTTCCCCGAGAATATGTATAC
ATAGTGATTTATCTATGGTTCGCTTTTAGTAGCGTCATAAGACTACGTGG
ATTTCTCATCTTGCAGGGAGCAAGACTGCAGTGGTACAATGGTCCAGCTG
TATTGATCGAATTGGTAGGCACAGTGATGGGCGCAGTGTTTTCTGCATGT
GTACTTTTGGGATACTTGCCAAGAGAACTGTTCCGGGAAATATTTGGTAT
AGAGATAGATCAAGAGAACATCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00089320-exon-Sc0000114-1564993656:569574..569706BlTCONS00089320-exon-Sc0000114-1564993656:569574..569706Branchiostoma lanceolatumexon
BlTCONS00089320-exon-Sc0000114-1564993656:567895..569091BlTCONS00089320-exon-Sc0000114-1564993656:567895..569091Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00089320BlTCONS00089320-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000114genomeSc0000114:567895..569706 -
Properties
Property NameValue
GeneIDBlCUFF043411