TCONS_00047970 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047970
Unique NameTCONS_00047970
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047970 ID=TCONS_00047970|Name=TCONS_00047970|organism=Clytia hemisphaerica|type=transcript|length=158bp
aagaagagcATTAGAGAAACTGGACAacttacaaaaatatcaaattttca
tcgaagcATCGACCGATAGAGTCAACACAAACACATGGTCGTTATATTCC
GCGGTTACGATAGATAGCATTGAATTTAAAAGCAGAAAAATATCATACCC
AGCAGGTG
Run BLAST on NCBI

transcript from alignment at scaffold_139:631396..631553

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047970 ID=TCONS_00047970|Name=TCONS_00047970|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at scaffold_139:631396..631553 (Clytia hemisphaerica)
CACCTGCTGGGTATGATATTTTTCTGCTTTTAAATTCAATGCTATCTATC
GTAACCGCGGAATATAACGACCATGTGTTTGTGTTGACTCTATCGGTCGA
TgcttcgatgaaaatttgatatttttgtaagtTGTCCAGTTTCTCTAATg
ctcttctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030531XLOC_030531Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047970-exon-scaffold_139-1491911889:631396..631553TCONS_00047970-exon-scaffold_139-1491911889:631396..631553Clytia hemisphaericaexon
TCONS_00047970-exon-scaffold_139-1510915933:631396..631553TCONS_00047970-exon-scaffold_139-1510915933:631396..631553Clytia hemisphaericaexon
TCONS_00047970-exon-scaffold_139-1575043694:631396..631553TCONS_00047970-exon-scaffold_139-1575043694:631396..631553Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:631396..631553 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047970 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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