TCONS_00047754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047754
Unique NameTCONS_00047754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047754 ID=TCONS_00047754|Name=TCONS_00047754|organism=Clytia hemisphaerica|type=transcript|length=1360bp
ttatctctTTTAGCCTCAAGATGTCCCAGATGCCAATGCAACAGTTCTGT
ATGTTGGAAATTTGGATAAAAGAGTTACAGACGCTATGATGATAAATATT
CTCAAAACTGGACTTGGACatattgaaaacaaaattcttGCATGCAATAT
GTTTCCTGGTGATATGAATAATCCAGATGGTTATTGCTTTGTCCAATTTG
AAGATAACAATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTCGTGAT
TTTTGTGGAAAGAAAGTGAAAGTTAATTGGGCAACAAATACAACAACAGG
AGGACCTCCAAAAGTTATTGGcaCAAGTGTCACAATATATGTTGGAAACT
TGGATGACACCATTGACGAGAATGACTTAAGAACTGCCTTTGAAGTCTTT
GGAGAAATCATAAATATCAAAGTTGTCAGGGATCCAGTCACaaacaaaag
taaaaacatAGGATTCATCTCTTACACAAACAAACCTGATGCTGAAAAAG
CTATCAGAGACATGAACCAGGCTATGTTGAAAACAAGGAGCATCAAGACA
AATTGGGCAACAAGAAATCAAAACCAAAAGCGAGAGGAGTTAGACTATGA
TGAAGTATTCCGAGAAACAGAAACAACCAATTGCACGGTTTACGTTGGTG
GGATCCCTGTTAATTGTCAAGATGCACAAATCAGAAGACATTTTGAAGAT
CATGGAAAAGTTACTGATGTTAGGATCTTTCCTGCCAAAAACTACGCATT
TGTTAGATTCGAATCACACGCTGCCGCAGCTACAGCAATCGTTAAAACGA
ACGGAAGTGATTTAATGGGATCAACCTTAAAGTGTTGGTGGGGTAAAGAA
GGACCCGAAGGAGGTAGCAGCCGTCCACACAACAATTACAACAACTCTCA
CCATGGTGGTGGATACAACAAAGATCACACACACGCCATGCAAAACATGA
CTCCtcaacagcaacaacaataTATGCAACAATATATGCAGCAATACAAT
CCATACTACCAACAACAATATTATCAATACTGGATGCAACAATATCAATA
TCAACAACAGATGCAACAAAATGGCGGCGGTGCTGGGGGCAACCCTGCAG
CCAGTGGTGGTAACTATCAACAAAACGGTTACCAAGGTTACGGTCAACAA
AGTGCTGGAAGTAACCAAGGAGGCGATCACCAACAACAAAGTTATCAACA
ACAAAACTAACCgactttatttttttaacgAACTGCTTGCGCGCTTGTAA
ATAGGTTTTGCTTTCATTGTTACAAACCCAACTACACCAACAACTTGTGT
CGATTttataaagaagaaaattttataaaaaatgaagaaattgctACTCT
AGTTTTCATT
Run BLAST on NCBI

transcript from alignment at scaffold_136:61169..70654-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047754 ID=TCONS_00047754|Name=TCONS_00047754|organism=Clytia hemisphaerica|type=transcript|length=9486bp|location=Sequence derived from alignment at scaffold_136:61169..70654- (Clytia hemisphaerica)
TTATCTCTTTTAGCCTCAAGATGTCCCAGATGCCAATGCAACAGTTCTGT
AAGTTCCCATCTAAAGAAATTGTAATGAAGGCAATGATTCAGGGATTTGT
TTAAAGGCCAGGGCAAACCAGTTCAACATTTCATCCAACATGACTTTCCA
ATGTTGGATGAAATGTTGGATGGAAAACTCCTGTTGGTTGAAGCAAAACT
TCAGGTTTGTGGGACTTTTTTAAAAAACCATTCAACAATAATTAGTTCAT
TCATTCTTTCAAAATAAAATGGCGTCAATTCAGACAATGAAAAACCAACC
AGACAGTCTAAACTTAAACTCCTATATCAGGGTTAGAAACTAGGCTGGTC
TTACCTCTTTTATCTTTTCCTTTATAACAATTCAATGCTCACAACACATG
TGTACATGTACATTGACAAGTAATCCCTCAGAAGTTTATTCCGAAATCTG
CAACAATAACAAAAGTTGTCTCTTCTACTGATTGCTTCCCAGCGCTCCTT
CACAGCTGTTTATCAAATTTCCACCAATAAGGTTGCCGCATTTCAAACGG
CCCTTCTCTTTGGCATCCGTTGCCTCTCAGTGCCTTGCACAACGAGCGGC
TGTAAAATCCCACCCTTCATATATTTGTTTCAATCTGTCATTTGTGGCTT
GGATTTTTTCCCCTCCTCAATTTACTGAAAAAAGCTGAGCAAATCCCTTT
GTTTGTCCTGTACTCGTTAGGTGCTCAAAGGATACATAGCATCTCGAAGA
GTTGTTAGGTTCGTTGGGTAGATTCAGCAAACAAAGACAAAATGAACGAA
AATTTCGTTAACATTTTAATGAAAAGAAAGGCGCTGTGGTATATGGTCAT
TGACCTTGGTTGCTGCACAGGTGACTGAGGTTCGATTCCCACTCGCAGCG
GTTCACTTGGCAAGTGAATAAACCTTCGCCCGGGTCAACCCATGCCATGT
GAGGGGAATTGGGTAGTCAGTTCAAGGTACTGACGGGGCGCTAATTGAAA
GCGTCTATAGTTGCGAAAATTGGCCTCTAAGCCTCCTGCGACTCAACCAA
ATAGAAAAAGAAAAGAGAAACTATTTTGACAAATTTGTCTCACAGCTAGA
TTGTGACAAGAATCCTCATGTATTAGAAATCTTAAATGTTGGGTCATATA
CTTAAGGTCCCGATAAACATAGCTAACTGAGGCCATAAATACAAAACATA
GAAAATATGATGATGACTATGGTTCTTGGATTGGATTAGCAGTTAAAAAA
TTGTAGTCAAGTGGTCCTTTCCAACAAACATTGCTCAATAATGAATATTT
ATAAATGGAAGTAATTCTTTTATAGGTATGTTGGAAATTTGGATAAAAGA
GTTACAGACGCTATGATGATAAATATTCTCAAAACTGGACTTGGACATAT
TGAAAACAAAATTCTTGCATGCAATATGTTTCCTGGTGATATGGTAATAA
TTATCTTATTAAAAAAGGAAATCTAAAGGGTGAATTAGTGAAAATGTCCA
ACTTTTATATATTAANTTATTAAAAAAGGAAATCTAAAGGGTGAATTAGT
GAAAATGTTCAACTTTTATATATTAATTATTAAGGCTTGCATTATCCTGA
ATTAAGGAAGTTCAAGGTATATTGAATATAAGCCTATCAAGTCACCAAAA
TCACCCATGCCGACATAATAATGAATTTCCATCATATTTCAAATTTGTAT
TTCTGTTTCAGAATAATCCAGATGGTTATTGCTTTGTCCAATTTGAAGAT
AACAATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTCGTGATTTTTG
TGGAAAGGTAACAAATCCTTATGGCAGGGAAATATCCTGAATGAATGTAA
CAGTGGATAATTTGAGATTCATGTGGGCAAAACCTAAATCAACAATGAGA
CCTTTCTATCATGAAAAATGAAATTTTTTTTTTAAGAAACACACTTTTAA
GAAACATGAGGCTCAAAATGCCTAAAAACTAAGAAACATCTAAGAAACAT
GCTGAGGCTGAGAATGAGAAAATAACATTTTTTAATTCGTTTTTTTTAAG
AACCTTCCAATCAAAAGAAATTTTTTTTCTTTGCATGAAATTAGGCTGAT
TATGTCAAAAAGTGTAGAAACATTTAAGGCTCAAAAGGCCGATTTTTTAA
GAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAGAATGTG
TATATTTATTTTTTTTCCACAGAAAGTGAAAGTTAATTGGGCAACAAATA
CAACAACAGGAGGACCTCCAAAAGTTATTGGCAGTAAATATTTTTTAATT
TATTAATGCATTTTATTTTCTGTATGCCACCTGACTGCTACTCTGTACCA
CAGTGTACCTGGCGTTTATCGCTTCTTAGTACACTCTAGGTGCTCACTGT
CTGTTTAATTAAAAATTCCTGTCTAGAGACCTCTGCGATGAAGTATGATT
TTAAAATAGCAACCACTTCTCTCATGGTCTCCCCTCTCTCACCAACACTC
CATTGCAGCAGTCGGTTTGAAAAATCTCAAATGAGAAAAGACAATGACAA
CAGACCCTCTACGGCAATGAATTTTGAAATAAGCCGTAGATACTGAGTTT
GTGTACATACAACCTGACTGCCTGTTATTTTAAACTAAGCAGTGCTAGAG
TTTAATTAAAATTTCATGTTGGAATCAAAATTGAAAAAAANCAGTGTTTA
AAGTTCTTCCGTCTCAGACGGATTTCCGTCTTAGCAAGGTGCAAAAAGAG
GCTTTTCCGTCACCAAATTCAACAAAAATTCAGCAAAACATGAAGAATCT
GGCCAGATTTGTTGTTTAAAGTCTATTTCCGTCTGTGATGAAAACTTTGC
TTTGACCACTGTATTTTAAACTAAGTAGTGCTAGAGTATAATTAAAATTT
CATGTTGAAATCAAAATTGAAAAAAACTTTTACTTGTTTTACTTTTAGCA
AGTGTCACAATATATGTTGGAAACTTGGATGACACCATTGACGAGAATGA
CTTAAGAACTGCCTTTGAAGTCTTTGGAGAAATCATGTAAGTTTTTCTTT
AACTCATTAGTTGTCACTTTTATTAATCCTTTTTCCATCTTCATATTTTC
TTGTTTTTATATCAATATCAATTTAAAACTTTCAAATTTATTTTTTCATA
AATTGCTAAATGATAATTTTATCATCTCATAATTATTGTAGATGGCTCCA
ACAAAAATGAAAACATCAAAGCAACCTGAATTGCAAAAGAGTAAATCTCT
ATAGTTATTCTATTTGTCTCATTTTTTCTTTTTTATTTCTTTTTCATTAT
TTCAATTTTTTGGTATTTCATTATGCCTTTCTTTTACTTAATTATTACTT
TTTGTTATTTTAGTTTAGACTTCTTGTAAAAGTGCATTTTGTTATTTTTA
AGTTTAAATCCTTCTTTCAGAAATATCAAAGTTGTCAGGGATCCAGTCAC
AAACAAAAGTAAAAACATAGGATTCATCTCTTACACAAACAAACCTGTGA
GTACTTTCTATCTGTGAGTGTGAATCTATTTATATTGTTTTTGTATTTCC
CATGTGTTAAATTGTGACTCCTTCAGAAAAGAATCAACTTTTTAAAAAGG
TCATAAAAAGATTCTTTGTATTTGCAGCTGAAGTTTTAATCTCAACTTTT
AATGTTTTTTTGGTGCATGAAAGACAAGGTTAAAATATCATGAATTTGCA
AGGTGAAAAACGATTATTTTAGGATGCTGAAAAAGCTATCAGAGACATGA
ACCAGGCTATGTTGAAAACAAGGAGCATCAAGACAAATTGGGCAACAAGA
AATCAAAACCAAAAGCGAGGTATGTTTTTTGCTTTTTTTAAAACTATTAA
CAATGGCTTGGAAACGACTCACAGAAAACATTAAAGAATGAAATTTGTAA
TCAGCTTTGATTAGAAAGTTAAATTCTACATGATCCAGAGTGTCATTACT
AAAATCTCAAAAAAAAAATCATAAAGTATTATGGGTAACCAAATAGATGG
CATGCAAAGGGAAAAAGCAACCTTCGAGTTAGAATACTTGAATTGGATTA
ACTTCCACAAAATTAAATTTTGCAAAGAAAATGTGTGAGATTGCTGACTT
GCAAGATTAAATCAACGTGAAATTAAAAAAACTCTTTTTCAGTGGAGGAA
CCAGTCAAAACACTATTCATGCCAAAAAATGAAAATTTTCAGCTTTTTTC
AGGCTCGTTTTCTAGATTAAGTCTGCACAGAATTTTTCGAAACAATTAAC
TTGCAAAATTAAATCGAAAAAATTTCGTGATTTCTTTATCCAATTAAAGT
AATAGCAATTTTAGTCGAAGTCTTCATTCAACGGTAGAATTTCATTTCCT
TAAATTTTCAGCAAATAAAATGATTTTTTTTTTCTTAAAATATTTCTCTC
TGCAGAGGAGTTAGACTATGATGAAGTATTCCGAGAAACAGAAACAACCA
ATTGCACGGTTTACGTTGGTGGGATCCCTGTTAATTGTCAAGGTATACAA
TGTCTGATTAATCTTCAGCAATCACTATATTTTTCAAAGTAAACTACCTT
TCTTTCTATAGTGTTATGTTCGTTTTATGGCCAGGCCATGGCGTACAGAG
TGCATTCGATTTGTTTTAAAGTCAATATGAAAAATTGTTAGCTCTTTGGA
AAATTCTCGAAATTCTTCTGTCTGCAGTTTGCTTTCATATTTTTATTATT
TTCTAAATAGATGCACAAATCAGAAGACATTTTGAAGATCATGGAAAAGT
TACTGATGTTAGGATCTTTCCTGCCAAAAACTACGCATTTGTTAGGTAAA
TATTTTCTGCAAATCAAAAGGGTTACAGTCACAAAATGATCGTTTTAGGT
AAATTCCTAGATATTTGCTTTCAAATGACTGAAATGACTGACGATTTCAG
GTGTAAAACTTTCTCTACCATGTTGAAATTCTATTTAGTCTGTTAAAAAA
AAGTAGATAGTAAAATTTAAGCGGTTTTGATTAAAGCCAAATCGACAGTA
TAAAAAGTGAGGTCTGGATCGCTGTAAAAAGTGTTGAGCTTGCAAAAACA
GTTTGTAAAACGAATGATCAAAACAAATTTCTTCGTCTTAGATTCGAATC
ACACGCTGCCGCAGCTACAGCAATCGTTAAAACGAACGGAAGTGATTTAA
TGGGATCAACCTTAAAGGTAATGCAAAACTTATCACTTTCTTTTGTCACA
GCAGGCAAACAATGGCTAAAGCTATAGAACTTAGATTTCTTTAAAAAGAT
CTCAAACTTTGCCTGAATCATTGCATTTTGTTGTGAAGAAGCATTGAGTT
TGGAATTAGATTTGGCCGGTCAAAAATGTTGTTTAACAAGTGTTGTTTGG
CACTTATTTGGTTCAATATCATGCAAAACTTAACTGAAAATCAACAGTTT
TGCAAACAAAGAAATTCTCACCCTAAGAGAATTTAAAGGGGAATTAACGT
TTGGAATTAACCCTGAAATTTGTTTTCCAAACATTAAAGAGGAAGAAAAA
TGTGATCGAACAAAAAAGAACCACTTCAAAATGTCTTTTATTCATTGAGT
TATTAATCTTTAATTTCTCACAATTTTGACTCTACAATGGAGAAAAACTC
CCCCTCTGTGTATTTTTTGACGTAAAGTGCACTGCAACTATTCTCACTGT
TACACTCTATGTAAAAGAGATATAAAACGTTAGAAATGAATCTTTTTTAG
AGTAATTATAGCAAAACGTCGAAGACATAAAACTAGGAGAATGTAGTTAG
TATTCCAAAGGTGCAGTAAATTCACTGACGGTAAAAAGAAACTCAAAAAC
TGCATATAAAAAAGAGAAACACAGTTCGCACCCTATGTCACATTTTTCGT
ATCGATAGCAACACAAGGGAATTTTCAAAGAACTCTTATTGGGTTCTTCC
AGAAAAAAATTGTAAATGGGGGGTGGAGGATATAACAATTTTTAGTGATT
TACCCCCCGAACAGAGTGACTTTTGGCCCCCCAGACAATAGGTTTTACAC
CCCGGACAATCATCTGTTGACCCCCCAGACAGAGCAAATTTTGATTTTTT
GCTACCCCCTGGACAAAATATCCTCCACCCCCCATGTACAATTTTTTTCT
GGAAGAGCCCATTCCGGATGTAGAAGAGTAAAGCCCTATAAACCATATAT
ATTTGAAATCGTCTCAATGAGCTCTACAGTATTTGAATCTGTCATTTGTT
TGTTGACAAATTTGAAACATTAATTCCCCTTTAAACTTGACTTTTTCTTA
ATAACAGTGTTGGTGGGGTAAAGAAGGACCCGAAGGAGGTAGCAGCCGTC
CACACAACAATTACAACAACTCTCACCATGGTGGTGGATACAACAAAGAT
CACACACACGCCATGCAAAACATGACTCCTCAACAGCAACAACAATATAT
GCAACAATATATGGTGAGTGAAACAAATCCTTTCATATAGAACACCTCCC
CCCTATTTTTAAGGGTTGACATCTAAAAAAAACTTTCCCTTTCTTCTTAA
GGAAATGTTAGAATCCATATCCTCTTACTTTCTAAAGTAACTTTCTTGTA
TCCGGCAGTCAAAACATTAAATTTCAAAGACTGTGATGCCCAGATACACT
ATGAAGCCATATTTACTTTTCAATAGCCACTATTCTCTATTCTCTAAGAG
CTCTTTTCACACAACAGATAATTGAATGAGAGTAAAAATAATTTTCTCAT
GTGTATCTATTCCAGCAGCAATACAATCCATACTACCAACAACAATATTA
TCAATACTGGATGCAACAATATCAATATCAACAACAGATGCAACAAAATG
GCGGCGGTGCTGGGGGCAACCCTGCAGCCAGTGGTGGTAACTATCAACAA
AACGGTTACCAAGGTTACGGTCAACAAAGTGCTGGAAGTAACCAAGGAGG
CGATCACCAACAACAAAGTTATCAACAACAAAACTAACCGACTTTATTTT
TTTAACGAACTGCTTGCGCGCTTGTAAATAGGTTTTGCTTTCATTGTTAC
AAACCCAACTACACCAACAACTTGTGTCGATTTTATAAAGAAGAAAATTT
TATAAAAAATGAAGAAATTCCTACTCTAGTTTTCATTTGTATTTGTAACT
TAAGTTTGTTCTCCGCAAATGTTAATTGCTGCCTGGTTGATCATTCCTTT
TCACATGCACGTAAAATTTTAATTTATATATTAAGCTCGTGGTCCACTTA
GCCTTTTTTGGTCATCGAACAACGCGCACGGCTCGATTTTTGCATTCTTT
TTAAAGTAGCCAATCAGCGGGCGAGAAGGTAAACATACTGTGTGTGTGTG
TTTGTTTTTATCATGTGCAATTGCTTTTGTTTTGATTTTCTCTTGCGGGT
AATGTTTTTCTTATTTACAATGGAAGTATAAAAGCGCTCAGCGAACAAAA
CGCTCGAGCTGTGTTTATCTGGTAATCGATGTAGAAATTTTCTTCCGACA
CACTAAAGCTCTGAAGGTCGGGAAAATTTTAACATCTGGAACCTTTGGGT
TACCATTTTTCATTTTTCTGTAAGGTTTCTCTGGCAGCAGAGATTTTCAT
GCCAAATTCAGTCGGGTGCAACTGATAGTCAAGCAAAAAGTGTAAGGATA
GCTAGACACAACTGTGATGCGGTACATCAAACGATGACTACTATAGGTCT
CCGATGGTGATATTGGCCCGCTCCTTCAGAGCTTTAGCGTGGGCGGCCGC
CAATAAACCATCGGAATATCAGATAAGAGCTGTGTGCGTTGTTGGGCGAC
CAAAAAAGCTAAGTGGACCACGAGCTTTACAGAAAATCGTTCGTAAGTAG
GGAAATTCCCCGCTATTACACACTACGTAAGCTTAGGGAATTTCCCATTC
TCTTAGGTCCAAATTTTGAAAAAATCCGCCAAATTAAATCCTCGTCAAAA
TTTAATTAGTATATTAGTATATTTTTTAAAGTATCTTTCATCCATTTCAG
TGTCTCCAATTTCCCAAATTAATTCACTGCCATAAATCTCATTCCTGCAA
ATCTCCAAAATTAATCCACTCAAATAGGGGGGTCCAAAAATTTTGATGTT
TAGCCATCTGTTTTAAATTAATTTTTCATGCTGATTCCGAATTTGAAATC
CGTTTTTCCATATCTCTTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNACTTTTGGCCCCCCAGACAATAGGTTTTACACC
CCGGACAATCATCTGTTGACCCCCCAGACAGAGCAAATTTTGATTTTTTG
CTACCCCCTGGACAAAATATCCTCCACCCCCCATGTACAATTTTTTTCTG
GAAGAGCCCATTCCGGATGTAGAAGAGTAAAGCCCTATAAACCATATATA
TTTGAAATCGTCTCAATGAGCTCTACAGTATTTGAATCTGTCATTTGTTT
GTTGACAAATTTGAAACGTTAATTCCCCTTTAAACTTGACTTTTTCTTAA
AAACAGTGTTGGTGGGGTAAAGAAGGACCCGAAGGAGGTAGCAGCCGTCC
ACACAACAATTACAACAACTCTCACCATGGTGGTGGATACAACAAAGATC
ACACACACGCCATGCAAAACATGACTCCTCAACAGCAACAACAATATATG
CAACAATATATGGTGAGTGAAACAAATCCTCTCAGATAGAACACCTCCCC
CCTATTTTTAAGGGTTGACATCTAAAAAAAACTTTCCCTTTCTTCTTAAG
GAAATGTTAGAATCCATATCCTCTTACTTTCTAAAGTAACTTTCTTGTAT
CCGGCAGTCAAAACATTAAATTTCAAAGACTGTGATGCCCAGATACACTA
TGAAGCCATATTTACTTTTCAATAGCCACTATTCTCTATTCTCTAAGAGC
TCTTTTCACACAACAGATAATTGAACGAGAGTAAAAATAATTTTCTCATT
TGTATCTATTCCAGCAGCAATACAATCCATACTACCAACAACAATATTAT
CAATACTGGATGCAACAATATCAATATCAACAACAGATGCAACAAAATGG
CGGCGGTGCTGGGGGCAACCCTGCAGCCAGTGGTGGTAACTATCAACAAA
ACGGTTACCAAGGTTACGGTCAACAAAGTGCTGGAAGTAACCAAGGAGGC
GATCACCAACAACAAAGTTATCAACAACAAAACTAACCGACTTTATTTTT
TTAACGAACTGCTTGCGCGCTTGTAAATAGGTTTTGCTTTCATTGTTACA
AACCCAACTACACCAACAACTTGTGTCGATTTTATAAAGAAGAAAATTTT
ATAAAAAATGAAGAAATTGCTACTCTAGTTTTCATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030407XLOC_030407Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047754-exon-scaffold_136-1575043694:70607..70654TCONS_00047754-exon-scaffold_136-1575043694:70607..70654Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:69212..69329TCONS_00047754-exon-scaffold_136-1575043694:69212..69329Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:68848..68943TCONS_00047754-exon-scaffold_136-1575043694:68848..68943Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:68372..68432TCONS_00047754-exon-scaffold_136-1575043694:68372..68432Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:67619..67706TCONS_00047754-exon-scaffold_136-1575043694:67619..67706Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:67159..67234TCONS_00047754-exon-scaffold_136-1575043694:67159..67234Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:66836..66932TCONS_00047754-exon-scaffold_136-1575043694:66836..66932Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:66163..66249TCONS_00047754-exon-scaffold_136-1575043694:66163..66249Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:65860..65944TCONS_00047754-exon-scaffold_136-1575043694:65860..65944Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:65488..65563TCONS_00047754-exon-scaffold_136-1575043694:65488..65563Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:61843..61998TCONS_00047754-exon-scaffold_136-1575043694:61843..61998Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1575043694:61169..61540TCONS_00047754-exon-scaffold_136-1575043694:61169..61540Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:70607..70654TCONS_00047754-exon-scaffold_136-1510915933:70607..70654Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:69212..69329TCONS_00047754-exon-scaffold_136-1510915933:69212..69329Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:68848..68943TCONS_00047754-exon-scaffold_136-1510915933:68848..68943Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:68372..68432TCONS_00047754-exon-scaffold_136-1510915933:68372..68432Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:67619..67706TCONS_00047754-exon-scaffold_136-1510915933:67619..67706Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:67159..67234TCONS_00047754-exon-scaffold_136-1510915933:67159..67234Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:66836..66932TCONS_00047754-exon-scaffold_136-1510915933:66836..66932Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:66163..66249TCONS_00047754-exon-scaffold_136-1510915933:66163..66249Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:65860..65944TCONS_00047754-exon-scaffold_136-1510915933:65860..65944Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:65488..65563TCONS_00047754-exon-scaffold_136-1510915933:65488..65563Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:61843..61998TCONS_00047754-exon-scaffold_136-1510915933:61843..61998Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1510915933:61169..61540TCONS_00047754-exon-scaffold_136-1510915933:61169..61540Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:70607..70654TCONS_00047754-exon-scaffold_136-1491911889:70607..70654Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:69212..69329TCONS_00047754-exon-scaffold_136-1491911889:69212..69329Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:68848..68943TCONS_00047754-exon-scaffold_136-1491911889:68848..68943Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:68372..68432TCONS_00047754-exon-scaffold_136-1491911889:68372..68432Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:67619..67706TCONS_00047754-exon-scaffold_136-1491911889:67619..67706Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:67159..67234TCONS_00047754-exon-scaffold_136-1491911889:67159..67234Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:66836..66932TCONS_00047754-exon-scaffold_136-1491911889:66836..66932Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:66163..66249TCONS_00047754-exon-scaffold_136-1491911889:66163..66249Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:65860..65944TCONS_00047754-exon-scaffold_136-1491911889:65860..65944Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:65488..65563TCONS_00047754-exon-scaffold_136-1491911889:65488..65563Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:61843..61998TCONS_00047754-exon-scaffold_136-1491911889:61843..61998Clytia hemisphaericaexon
TCONS_00047754-exon-scaffold_136-1491911889:61169..61540TCONS_00047754-exon-scaffold_136-1491911889:61169..61540Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_136supercontigscaffold_136:61169..70654 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
86.8815	68.2173	107.511	83.883	4.25309	2.37009	2.52835	6.98594	28.073	23.2226	36.3596	41.5294	46.2486	47.1716	22.6045	20.4014	27.9463	34.8237	18.6822	18.5947	76.2801	54.3788	94.5778	67.5801	4.43289	7.72847	132.84	130.995	82.5679	106.832
Blast
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BLAST of TCONS_00047754 vs. Swiss-Prot (Human)
Match: TIAR (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.070e-61
Identity = 112/284 (39.44%), Postives = 164/284 (57.75%), Query Frame = 2 
Query:   29 DANATVLYVGNLDKRVTDAMMINILKTGLGHIENKILACNMFPGDMNNPDGYCFVQFEDNNAACQAMTFLNGRDFCGKKVKVNWATNTTTGGPPKVIGTSVTIYVGNLDDTIDENDLRTAFEVFGEIINIKVVRDPVTNKSKNIGFISYTNKPDAEKAIRDMNQAMLKTRSIKTNWATRN-------QNQKREELDYDEVFRETETTNCTVYVGGIPVNCQDAQIRRHFEDHGKVTDVRIFPAKNYAFVRFESHAAAATAIVKTNGSDLMGSTLKCWWGKEGPE 859
            D     LYVGNL + VT+ +++ +  + +G  +    +C M     +N D YCFV+F ++  A  A+  +NGR   GK+VKVNWAT  T     K       ++VG+L   I   D+++AF  FG+I + +VV+D  T KSK  GF+S+ NK DAE AI  M    L  R I+TNWATR        Q    ++L +++V  ++   NCTVY GGI     D  +R+ F   G++ ++R+FP K Y+FVRF +H +AA AIV  NG+ + G  +KC+WGKE P+
Sbjct:    5 DGQPRTLYVGNLSRDVTEVLILQLF-SQIGPCK----SCKMITEHTSN-DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPD 280
The following BLAST results are available for this feature:
BLAST of TCONS_00047754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIAR1.070e-6139.44Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=... [more]
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