TCONS_00047430 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047430
Unique NameTCONS_00047430
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4642

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047430 ID=TCONS_00047430|Name=TCONS_00047430|organism=Clytia hemisphaerica|type=transcript|length=4642bp
GAAACTAATGGAATAATGAGATGGAGAAGATTTAGAAGTTTCCAAACGCC
ATCCAAAGATGTTGAGGTTACTGCTCACATTGACAGTCTTTTCAACATGG
AATATGTTGGAGGTGTTTGGTGAAGGTGAACAATCTCCTCCTGTCGTTCA
ACAATCAACAAATATGTTCAACAACTTGACGTTAGAGACTTTCGAACAGT
CAACAAAAGAGAAAGATATAATGTTGGTTCTCTTCTTTGTACCATGGTGT
CCACATTCTAAAGCGATCCAACCAGAATGGGAGAAAGCATCAAATGTACT
TGAACAACAAAAGGAATATGTTCTTGGTCGAGTCAATTGTGAAGATAGTG
GGAAAACACTTTGTGAAAAATATGACGTCAAAAAATATCCGACAGTTAAG
TTATTCCGACATGGACAGTTCCAAGAAGATTTTGATGGCAGAAATGCAGA
TTCATTAATCGATTTCGTACAAAGAGCACAATCAACAAACGGACCTGTTG
GAACGACACCAACGCCACCCTCTACTTCAACCACACAATCACCGCCACAG
CAAACAGGGGCGTCTCTGGTGAACAGTGAGCAACAAACACAACAACAGCC
ACAAGCACAAGTTGTCACTCAATACCAATCAAAAACGTGAACAGCCAACA
GCAGCAAGTTTCAGCGCCTGTTGTACAAACACAAAACCAACCCCAAATTG
CAGAAAATGCACCCGTAAATCCGCCCTCGAATCCGCCATCTAATACTCCA
GCGGGCGGAAATTCAATTCAAGGATTTCAATCCGAAAataaactttcaca
acaaaaagCAGGACCAAGTCTAATGTCTTTATATGAATCCGTCTCTAAAA
CTAAAGGTGGGCCTCACCCTTTATACCCACAAACATTCCATTCACAAGGC
CCCGTTGGAACAGCTCCGGCCTCAATAAGCCAAGAACCTTTTATACCAAA
GCGAGATGCTGCCATTATGAATTACGTCATGAACCGACATGAAGAAATAA
AACAATCACCGGGCGATTATCAGAGATTGGTAACTTCGAAAGATGTTGAT
CAAATCAAGAAATATTACGAATGGAAATTCAAACAACTGTCCTTACcaga
gaaagaaaaacaaaaacgtaTTGAACTTGGTTCTATGTTACTGGGAGATA
AACGCGCAAAAGACTAAACGCAAGCTGTACTAATATATTTCTCCATCNTT
CAAGGATTTCAATCCGAAAataaactttcacaacaaaaagCAGGACCAAG
TCTAATGTCTTTATATGAATCCGTCTCTAAAACTAAAGGTGGGCCTCACC
CTTTATACCCACAAACATTCCATTCACAAGGCCCCGTTGGAACAGCTCCG
GCCTCAATAAGCCAAGAACCTTTTATACCAAAGCGAGATGCTGCCATTAT
GAATTACGTCATGAACCGACATGAAGAAATAAAACAATCACCGGGCGATT
ATCAGAGATTGGTAACTTCGAAAGATGTTGATCAAATTAAGAAATATTAC
GAATGGAAATTCAAACAACTGTCCTTACcagagaaagaaaaacaaaaacg
taTTGAACTTGGTTCTATGTTACTGGGAGATAAACGCGCAAAAGACTAAA
CGCAAGCTGTACTAATACATTTTTCCATCTCCAATGATAACACAATGACG
AAAGCTGAACATTTCTAGGACAACCTGAACAAAAATACGTTGTGAAAGGT
GTGGTTTTTGAATTGGAATGATTTCAGAATTAATACGGCCTTAATCTTTT
TATATTGATAGGACTTTTCATAAGTTATTTTGAGTTCAAACGACTGCctt
gttttgaaacaattatcaaggtgattaaatccctGGAGTCTTCAAGTgcg
attttttttaaacagagTAAACTTCTTATGGGTTCTCTTGGAAATCAATT
ACTAtggcaatattttgaaaacgagatAAAGCGTTGCTCGTAacgtaatt
catgaaaaggtcTGTTGACCTTTATGATGATTTTGGCTGACCGATAATGA
TAACGTTAAAAGTGAAAGGACTTATATCGATGACTTTGGCTGACCGTCAC
TATTATGCACCGGTCATGGTCCGATTTTCATCATCGTGGATAATGCATTC
AGTTCGAATATTCAGAATACATTATttagtttctcatttttatgtaaaat
gcaaaacaattttgatttctatAAATTAATCAATCTTATACTGAATCAGA
TATTGAAACAAAGTTGAATAAACCCCCGGTTCTCCATTGATTTTTGTCTG
GATTCTAACCAAAAATGTGTAGAACCAGGGGGTAGTCTTTTATATGTTAC
TATGATCAACCGTTAGTAAATAAGTCTGCCAttttaaattgacatttttt
atcTGTGGATATTTTATATCTTGAAAGTAGTTTTTGATGGAAGTGTTTTC
GTAGCAATACAACGTGatacttttttttcatcatgTCACGCATTTCGGTC
GATCACGATTCAATCGAAGATCACGCTGTACACAATGAAGTTCCCGAATT
CATGTCGCTTATCAAACACTATAAAGAGAAGGGTTGTTATCAGGAAGTCC
TTGCAATGAGATACAGATATGGCAAATGCAACCTTTTCCATTTGATAGCA
CGTAAAAGTACTTTACAACTCATCAAAACTTTTTTCGATTACACCGAGAG
CATTATGGGTAAAAACTTTCTTACTTACGAGCTTAACACGACGGTTGATC
GCAACGGGCGTACATTTTTTATCATTGCAGCCAAGCATCTCCAAGAAGAA
ATCTTAATGtatattttaaaagaatataACCTAGATCCAGGTTACTATGC
TGCCTACAACAAATCGTCCGCTTTCACATATCTCACCAAACGTAAACTAA
CCGACTGCATGGTTCGAGCTCTTGCCTTGATTGACCAAACAAAGTTAAGC
GAGGAAGGTTTCAAATGGTTTCTTGATGACATGGAGTTACTTAAAGATAC
AATGACCGAGAAAGGGTTAATCGAGGCAAAATGGATGTCAGCTATGACCT
ATAGATTCAAACTGGGTGGGCGAGTTTCCAAAATGCAACCGTTTCAGGAG
TCAACGATTGCGTCATACGGTGGTGACTTACGTGTCCGTCAAATCTTACG
TCATATATCTACGCAACTTTTCTTCCGTTGGAAATATTACCTTGGGTATA
GTTTGTTAGAAGATGTTCAAATTTTGTACATGATCAAAAAGGCTGATAGG
GAAAACCCAAACCCAAAGCCAATCATATTTGTTGGTTGCACTCCACTAGA
GGTTGGCGAGTACATAAAGGAAGATTACAAAACTCGATCGTTACGTGAAA
TATTGACCAAAGAATACGACTGTCACCAACACGATGAAGAAGGTGATAAA
CGGTCCCGACGATTTGCTGCTAAAATTCGTTCAAGATGCTGGGGTTCAAA
AGTCAAACGTCAAACACGTGAGTCGCGTGATATTATCAACCTTCTACACG
TGGATAAGAAGAAATGTCAGAAAGTGGTCAAGCTGAAAACCAAAGTCAAG
CTCCCTTACCTGGATCTAACCGAAAATGGTTTCTATTTGATCATACCGGG
CGGGAATTACCTGAATACAAATATCCATGCGGAAGAATCCTTATGTGACG
TATCAAGCTATCTCTACAACGCTTGGGATCACAAATCAGTCATCTACGGT
AAAAACCGGCCTTGTATATCATGTTGCGGCCGCTTGAAATCAGAAGCAGT
CGATGAGTACAATAAAAAGCATGGCTTCCTGTATACCCATACTATTGAGT
ACCAAGAGGATGACGCTAGACTGCAAACCTTATCTCTCCTATACACTTCT
CCTTCATTTATAACTAAGAAGCCACCACCGAAGCTACNAGATGACGCTAG
ACTGCAAACCTTGTCTCTCCTATACACTTCTCCTTCATTTATAACCAAGA
AGCCACCACCGAAGCTACAAGATGGTGAAGAAGTTATGGAGTATAAGAAA
GATGGTAGCAATGTTGGTCATGTTGAGGGGAATGTGGATGAGTTTGAAGA
TTTCGTGAAAGGTTATGATACTGCAAGTGACTCCGAAGCTGAATGATCGT
TTGGTTGGGAttggttttaaaagttttttaatctTAATCTGGACATTTTA
ACAATACATCAAAACTAGCGAGGTTATGCAAGAAGCTATCTACGGCAAAC
ACGAAATCTATGGCGTGAGTTTTTTGCAGACTAGCGTCCAAACCACAAAG
ATAGCTCTGTATCCAGTCTAAAACCCTACGGCATAGATTCTATACGTCAT
AGATAGccagaccatgttcgcacgtgacggttccgtttcgctccgaaaca
aaatgaagccattttaTTGGTTACATttaagttttacgtcacttctaacc
aatagaacgACTTCATTCCGTTTCGGAGCAAAACGGAACCGTcgcgtgcg
aacatggtcttaacCTCACACTTTTCCCATCACAGGGTAAAGATACTTAA
TAGGGACTGCCAATCCCCGTTCATTGGgtgattttttctatttgacTTTC
AAAAGAAAGTCTCAGTGAATAGTGCCAAACAGTATCTTTCCAGCGTCTGG
CACAAAGCCTGGTACAGCCTATACCCTGTGAATAGCGGTTGAATCTTCAG
TACTGAAGGAGCTTTTTATATAGATATCAAAGAATTAGACAC
Run BLAST on NCBI

protein sequence of TCONS_00047430-protein

>TCONS_00047430-protein ID=TCONS_00047430-protein|Name=TCONS_00047430-protein|organism=Clytia hemisphaerica|type=polypeptide|length=537bp
MSRISVDHDSIEDHAVHNEVPEFMSLIKHYKEKGCYQEVLAMRYRYGKCN
LFHLIARKSTLQLIKTFFDYTESIMGKNFLTYELNTTVDRNGRTFFIIAA
KHLQEEILMYILKEYNLDPGYYAAYNKSSAFTYLTKRKLTDCMVRALALI
DQTKLSEEGFKWFLDDMELLKDTMTEKGLIEAKWMSAMTYRFKLGGRVSK
MQPFQESTIASYGGDLRVRQILRHISTQLFFRWKYYLGYSLLEDVQILYM
IKKADRENPNPKPIIFVGCTPLEVGEYIKEDYKTRSLREILTKEYDCHQH
DEEGDKRSRRFAAKIRSRCWGSKVKRQTRESRDIINLLHVDKKKCQKVVK
LKTKVKLPYLDLTENGFYLIIPGGNYLNTNIHAEESLCDVSSYLYNAWDH
KSVIYGKNRPCISCCGRLKSEAVDEYNKKHGFLYTHTIEYQEDDARLQTL
SLLYTSPSFITKKPPPKLXDDARLQTLSLLYTSPSFITKKPPPKLQDGEE
VMEYKKDGSNVGHVEGNVDEFEDFVKGYDTASDSEAE
Run BLAST on NCBI

transcript from alignment at scaffold_128:35158..43938+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047430 ID=TCONS_00047430|Name=TCONS_00047430|organism=Clytia hemisphaerica|type=transcript|length=8781bp|location=Sequence derived from alignment at scaffold_128:35158..43938+ (Clytia hemisphaerica)
GAAACTAATGGAATAATGAGATGGAGGTCAGTggtctaaatttttgaaag
ccTGTCTCAAAACTAGTTTATTGCATTCTGAAGCTGAAGGCAGAATTAAC
CAAATATCAAATGTTTGGAGATTAATAACCGCTNTATTTTGAAGCTGAAG
GCAGAATTAACCAAATATCAAATGTTTGGAGATTGATAACCGCTTGTAAT
GTTTTAACATTCTGAAACCTTACTGTAAAGTTATTCTCTAGAAGATTTAG
AAGTTTCCAAACGCCATCCAAAGATGTTGAGGTTACTGCTCACATTGACA
GTCTTTTCAACATGGAATATGTTGGAGGTGTTTGGTGAAGGTGAACAATC
TCCTCCTGTCGTTCAACAATCAACAAATATGTTCAACAACTTGACGTTAG
AGACTTTCGAACAGTCAACAAAAGAGAAAGATATAATGTTGGTTCTCTTC
TTTGTACCATGGTGAGTCATCGAccgtttagatttttttaatctACTCCc
agtggaggtcctataaataaACTGATGTTCGTTCGTCTTCAGAAATCTCC
ATTTTtccagattttcattggactttttccttatatttctttgttattta
ttttcacagaaaaacattattgataacaatgctcaccatcaagcatgttt
caattgataataaactgatttttgcaaccggaactttctatctatttttt
ccttacaaccctttcctctccccccatcaacaatcaatgatgaaatttaa
tgcgcTATGCATTTTTGCTAAACGCTTTATTTACTGActggttgttttca
tttttctccttattgctatctaactttcatcatcaggtaggtccattcag
caccTAGCTTGTTTAATCTACTCCCAGGTGTTTTAAGCAATAAGAGCACC
CTCCCTGTTTGTTAATGTTATTTTTGAGGGGGTTTTTAGAAGTACAAATT
CTGTCCTGTAGCCCTCCTGTTTGTCTTAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCCATAGCttttctagatcgaaaataatcgag
ggtggtagattctacccccccctggggatacaaaagtcaaaaaagcttgg
ggctaatagggttaatacGGTTCTTTCTTTCCCAGACAGGACAGATCCCA
TTGAGGATGGTTCTGCACTATAATGCTATTAGTAATTAAGTAATTTAATC
AAACATGCACTCGCTTCCTTGACTAgtgataaacaaaaaatttccatttc
gttcatttatttcaaatataGGTGTCCACATTCTAAAGCGATCCAACCAG
AATGGGAGAAAGCATCAAATGTACTTGAACAACAAAAGGAATATGTTCTT
GGTCGAGTCAATTGTGAAGATAGTGGGAAAACACTTTGTGAAAAATATGA
CGTCAAAAAATATCCGACAGTTAAGTTATTCCGACATGGACAGTTCCAAG
AAGATTTTGATGGCAGAAATGCAGGTTTgatgcttttttttataagaaca
tgtaaATTTTGTTTAAGGCTCGGCTGTTCTCATTTTCACGAAGGGAGCTC
TCAAAATCATCCCCAATCCCTTATTAGTAATTtttgaggctcagattgtt
atCATTTTGTTCTTAGGGTTAGACCAGATTTACCTAAAGAAATCATGAAG
TTGGTCTCACAAAAACTAATGAATACAGATTTTAATTTGCTtggagttga
aaaatttcaaaattggttgAGCTTGCGTCCATGAACAAATGGGTCTTTCT
TGAATTTTGGCCTTTTGGTTTCGATAGATAATAGCTTTTATTGACTTTTT
TGTtgagttacacgttttttttttaataaggaacacgtttataaggaact
cgaggctgaaaatggtccaaaaaataaggaattgttaaggaactgctcag
gctgagaataagaaaactagttttaaggaatccaatttttgcgaatccaa
acttagcagctatgtaaataaggaactcgataaggaactttgaggctgaa
attctctgtaaaaataaggaactccaggctcagagcaaagttaaggttcc
ttataaaaaaaaaacgtgtaattggtTTTCACCCTGTCTCTTTTTCCTAT
TAGTACTTTTTGTAAATCTAGGAAACTAATTTCGGTGGGAACTTCTTTTG
GCGGGCAGCAAAAATCctgaaaagaatttaaattttgtGGAATAATTTCA
GCGAATAGCAGGGTAAATTGGTTCATTTTTGCCTGTAAAATGAATCCGTt
aggcaaaaattaagttttattttAGAAAACGATGAAAAATCTAGTTTCGG
CGAGGAACTTACTTTGCTAAGggagtaatttttttattttagcgataact
aattttgaaGAATGAGTTGCCTTAAAGATAAATTTAATgagataaaaaaa
tctttcagaaGTTTTTGATTTCTTCAGATTCATTAATCGATTTCGTACAA
AGAGCACAATCAACAAACGGACCTGTTGGAACGACACCAACGCCACCCTC
TACTTCAACCACACAATCACCGCCACAGCAAACAGGGGCGTCTCTGGTGA
ACAGTGAGCAACAAACACAACAACAGCCACAAGCACAAGTTGTCACTCAA
TACCAATCAGCAGGTGGTGGGTTACTTACTCatacgtcaaaacaacgttt
atttaacagcctaggctacgtcatatatcttccttcgtttcaaaaactaa
aaaagccTGGAGCTATCTTTGTATAGATTATTAACAGCCATAATATTCAT
AGATTTTAGGATATACGATATACATTGAAACAGTATTGTTAATCAGTTTA
CCTATAAATAAACTAACAGTTATTTCATCCTATTTTTTCTAGAGACTATC
ACACGGGAAAgcataaagcttttaatgccaATATAATCAGTGTAGTTTTT
CCTGACAGTATTTATTCCTTTACTGCCTTACTGTTAGAAACataaatttt
cctttatttCCTCTCTAGAAAACGTGAACAGCCAACAGCAGCAAGTTTCA
GCGCCTGTTGTACAAACACAAAACCAACCCCAAATTGCAGAAAATGCACC
CGTAAATCCGCCCTCGAATCCGCCATCTAATACTCCAGCGGGCGGAAATT
CAATTCAAGGATTTCAATCCGAAAataaactttcacaacaaaaagCAGGA
CCAAGTCTAATGTCTTTATATGAATCCGTCTCTAAAACTAAAGGTGGGCC
TCACCCTTTATACCCACAAACATTCCATTCACAAGGCCCCGTTGGAACAG
CTCCGGCCTCAATAAGCCAAGAACCTTTTATACCAAAGCGAGATGCTGCC
ATTATGAATTACGTCATGAACCGACATGAAGAAATAAAACAATCACCGGG
CGATTATCAGAGATTGGTAACTTCGAAAGATGTTGATCAAATCAAGAAAT
ATTACGAATGGAAATTCAAACAACTGTCCTTACcagagaaagaaaaacaa
aaacgtaTTGAACTTGGTTCTATGTTACTGGGAGATAAACGCGCAAAAGA
CTAAACGCAAGCTGTACTAATATATTTCTCCATCNTTCAAGGATTTCAAT
CCGAAAataaactttcacaacaaaaagCAGGACCAAGTCTAATGTCTTTA
TATGAATCCGTCTCTAAAACTAAAGGTGGGCCTCACCCTTTATACCCACA
AACATTCCATTCACAAGGCCCCGTTGGAACAGCTCCGGCCTCAATAAGCC
AAGAACCTTTTATACCAAAGCGAGATGCTGCCATTATGAATTACGTCATG
AACCGACATGAAGAAATAAAACAATCACCGGGCGATTATCAGAGATTGGT
AACTTCGAAAGATGTTGATCAAATTAAGAAATATTACGAATGGAAATTCA
AACAACTGTCCTTACcagagaaagaaaaacaaaaacgtaTTGAACTTGGT
TCTATGTTACTGGGAGATAAACGCGCAAAAGACTAAACGCAAGCTGTACT
AATACATTTTTCCATCTCCAATGATAACACAATGACGAAAGCTGAACATT
TCTAGGACAACCTGAACAAAAATACGTTGTGAAAGGTGTGGTTTTTGAAT
TGGAATGATTTCAGAATTAATACGGCCTTAATCTTTTTATATTGATAGGA
CTTTTCATAAGTTATTTTGAGTTCAAACGACTGCcttgttttgaaacaat
tatcaaggtgattaaatccctGGAGTCTTCAAGTgcgattttttttaaac
agagTAAACTTCTTATGGGTTCTCTTGGAAATCAATTACTAtggcaatat
tttgaaaacgagatAAAGCGTTGCTCGTAacgtaattcatgaaaaggtcT
GTTGACCTTTATGATGATTTTGGCTGACCGATAATGATAACGTTAAAAGT
GAAAGGACTTATATCGATGACTTTGGCTGACCGTCACTATTATGCACCGG
TCATGGTCCGATTTTCATCATCGTGGATAATGCATTCAGTTCGAATATTC
AGAATACATTATttagtttctcatttttatgtaaaatgcaaaacaatttt
gatttctatAAATTAATCAATCTTATACTGAATCAGATATTGAAACAAAG
TTGAATAAACCCCCGGTTCTCCATTGATTTTTGTCTGGATTCTAACCAAA
AATGTGTAGAACCAGGGGGTAGTCTTTTATATGTTACTATGATCAACCGT
TAGTAAATAAGTCTGCCAttttaaattgacattttttatcTGTGGATATT
TTATATCTTGAAAGTAGTTTTTGATGGAAGTGTTTTCGTAGCAATACAAC
GGTAAATCTTTCGAATATTACGAATCCTGTTGATAATAATTTTCctcttt
taaatattttcaaagggtCAGCGAAATTTTGTAAAGAAACCGTAAAATCC
AGACTTGATTCCATGATTTCCTAAGGATTTTATCAGGACTGAGCCTTAGA
TATAAAGTTGGTCTTACAACGAGTTTGCCTTATGAAAATCatgttctttt
gaaaatttgctaaTGGGGAGAGTTTAACAGTTCTGTGAGACAGGTGTTTA
GTCTTAGTCAGATATATTTTACACTTTGTCGCTAATTCAATTATTTCTTT
CAATTTGCTTACCTTCCAGTGatacttttttttcatcatgTCACGCATTT
CGGTCGATCACGATTCAATCGAAGATCACGCTGTACACAATGAAGTTCCC
GAATTCATGTCGCTTATCAAACACTATAAAGAGAAGGGTTGTTATCAGGA
AGTCCTTGCAATGAGATACAGATATGGCAAATGCAACCTTTTCCATTTGA
TAGCACGTAAAAGTACTTTACAACTCATCAAAACTTTTTTCGATTACACC
GAGAGCATTATGGGTAAAAACTTTCTTACTTACGAGCTTAACACGACGGT
TGATCGCAACGGGCGTACATTTTTTATCATTGCAGCCAAGCATCTCCAAG
AAGAAATCTTAATGtatattttaaaagaatataACCTAGATCCAGGTTAC
TATGCTGCCTACAACAAATCGTCCGCTTTCACATATCTCACCAAACGTAA
ACTAACCGACTGCATGGTTCGAGCTCTTGCCTTGATTGACCAAACAAAGT
TAAGCGAGGAAGGTTTCAAATGGTTTCTTGATGACATGGAGTTACTTAAA
GATACAATGACCGAGAAAGGGTTAATCGAGGCAAAATGGATGTCAGCTAT
GACCTATAGATTCAAACTGGGTGGGCGAGTTTCCAAAATGCAACCGTTTC
AGGAGTCAACGATTGCGTCATACGGTGGTGACTTACGTGTCCGTCAAATC
TTACGTCATATATCTACGCAACTTTTCTTCCGTTGGAAATATTACCTTGG
GTATAGTTTGTTAGAAGATGTTCAAATTTTGTACATGATCAAAAAGGCTG
ATAGGGAAAACCCAAACCCAAAGCCAATCATATTTGTTGGTTGCACTCCA
CTAGAGGTATGATTATTTGCAGTATTCAGAGTCACAGAGacactattttt
ttattttaataatggCACTTGATTATTCTTAACGACGGCATTTGCCGcca
aaaaattggctttcaaNTTGATACGTGCCCACCCCCGGAGAGGGGGGCAC
TTGATTATTCTTAACGACGGCATTTGCCGccaaaaaattggctttcaaaa
tcggtGCCCTTTATTGAACTTTTCTGACCCTCGCAGTGTAGTTTGATATC
ATGTCTTACTATTTTGCTAAAGCTAGAGTCTGGAATTTATTTTCCATTGT
CCCCAAAAACAAGCCCTTAGAGTGCATGAAGCTAATATGACATAATGTGA
TataacccttacagtgcacccTTACTTACAGTGCATTACAAGGGTCTTGA
AAAACCAACCAACCCTTCAGGACGGtacatgccgtgggtcggaccatGTG
AGTAAATAGTAACCGatcactttttattttcttatttcgaAAGGTTGGCG
AGTACATAAAGGAAGATTACAAAACTCGATCGTTACGTGAAATATTGACC
AAAGAATACGACTGTCACCAACACGATGAAGAAGGTACTTCCCCTCCTGT
CTTTAAAGTTCTGATAGGCCATGATTCTAATACATCAAGAACAATCGTAG
GACTGATCGCACACTCTAATTATGATTTcctcttcaaaattttcaaatga
ttgaAGTGATATAAAGTCGTTATTAGTTCTCATATTCATATTCATTGCGA
TCGGTAAACTTCTTGTCGCCTGAATAGAATAACATTATCCACGGAGAAAC
TTTTGAACTTCTGACACAAATCTAATTAAAGAATATACTTACGAGTAGtt
atgaaaaattcaataaacttttgtCCAAGAGACTTCACCCAGGGTATAAT
ACTAAGACTCATTCAATGTTTTATTCATTAGGTGATAAACGGTCCCGACG
ATTTGCTGCTAAAATTCGTTCAAGATGCTGGGGTTCAAAAGTCAAACGTC
AAACACGTGAGTCGCGTGATATTATCAACCTTCTACACGTGGATAAGAAG
AAATGTCAGAAAGTGGTCAAGCTGAAAACCAAAGTCAAGCTCCCTTACCT
GGATCTAACCGAAAATGGTTTCTATTTGATCATACCGGGCGGGAATTACC
TGAATACAAATATCCATGCGGAAGAATCCTTATGTGACGTATCAAGCTAT
CTCTACAACGCTTGGGATCACAAATCAGTCATCTACGGTAAAAACCGGCC
TTGTATATCATGTTGCGGCCGCTTGAAATCAGAAGCAGTCGATGAGTACA
ATAAAAAGCATGGCTTCCTGTATACCCATACTATTGAGTACCAAGAGGAT
GACGCTAGACTGCAAACCTTATCTCTCCTATACACTTCTCCTTCATTTAT
AACTAAGAAGCCACCACCGAAGCTACNAGATGACGCTAGACTGCAAACCT
TGTCTCTCCTATACACTTCTCCTTCATTTATAACCAAGAAGCCACCACCG
AAGCTACAAGATGGTGAAGAAGTTATGGAGTATAAGAAAGATGGTAGCAA
TGTTGGTCATGTTGAGGGGAATGTGGATGAGTTTGAAGATTTCGTGAAAG
GTTATGATACTGCAAGTGACTCCGAAGCTGAATGATCGTTTGGTTGGGAt
tggttttaaaagttttttaatctTAATCTGGACATTTTAACAATACATCA
AAACTAGCGAGGTTATGCAAGAAGCTATCTACGGCAAACACGAAATCTAT
GGCGTGAGTTTTTTGCAGACTAGCGTCCAAACCACAAAGATAGCTCTGTA
TCCAGTCTAAAACCCTACGGCATAGATTCTATACGTCATAGATAGccaga
ccatgttcgcacgtgacggttccgtttcgctccgaaacaaaatgaagcca
ttttaTTGGTTACATttaagttttacgtcacttctaaccaatagaacgAC
TTCATTCCGTTTCGGAGCAAAACGGAACCGTcgcgtgcgaacatggtctt
aacCTCACACTTTTCCCATCACAGGGTAAAGATACTTAATAGGGACTGCC
AATCCCCGTTCATTGGgtgattttttctatttgacTTTCAAAAGAAAGTC
TCAGTGAATAGTGCCAAACAGTATCTTTCCAGCGTCTGGCACAAAGCCTG
GTACAGCCTATACCCTGTGAATAGCGGTTGAATCTTCAGTACTGAAGGAG
CTTTTTATATAGATATCAAAGAATTAGACAC

Coding sequence (CDS) from alignment at scaffold_128:35158..43938+

>TCONS_00047430 ID=TCONS_00047430|Name=TCONS_00047430|organism=Clytia hemisphaerica|type=CDS|length=4842bp|location=Sequence derived from alignment at scaffold_128:35158..43938+ (Clytia hemisphaerica)
atgTCACGCATTTCGGTCGATCACGATTCAATCGAAGATCACGCTGTACA
CAATGAAGTTCCCGAATTCATGTCGCTTATCAAACACTATAAAGAGAAGG
GTTGTTATCAGGAAGTCCTTGCAATGAGATACAGATATGGCAAATGCAAC
CTTTTCCATTTGATAGCACGTAAAAGTACTTTACAACTCATCAAAACTTT
TTTCGATTACACCGAGAGCATTATGGGTAAAAACTTTCTTACTTACGAGC
TTAACACGACGGTTGATCGCAACGGGCGTACATTTTTTATCATTGCAGCC
AAGCATCTCCAAGAAGAAATCTTAATGtatattttaaaagaatataACCT
AGATCCAGGTTACTATGCTGCCTACAACAAATCGTCCGCTTTCACATATC
TCACCAAACGTAAACTAACCGACTGCATGGTTCGAGCTCTTGCCTTGATT
GACCAAACAAAGTTAAGCGAGGAAGGTTTCAAATGGTTTCTTGATGACAT
GGAGTTACTTAAAGATACAATGACCGAGAAAGGGTTAATCGAGGCAAAAT
GGATGTCAGCTATGACCTATAGATTCAAACTGGGTGGGCGAGTTTCCAAA
ATGCAACCGTTTCAGGAGTCAACGATTGCGTCATACGGTGGTGACTTACG
TGTCCGTCAAATCTTACGTCATATATCTACGCAACTTTTCTTCCGTTGGA
AATATTACCTTGGGTATAGTTTGTTAGAAGATGTTCAAATTTTGTACATG
ATCAAAAAGGCTGATAGGGAAAACCCAAACCCAAAGCCAATCATATTTGT
TGGTTGCACTCCACTAGAGGTTGGCGAGTACATAAAGGAAGATTACAAAA
CTCGATCGTTACGTGAAATATTGACCAAAGAATACGACTGTCACCAACAC
GATGAAGAAGGTGATAAACGGTCCCGACGATTTGCTGCTAAAATTCGTTC
AAGATGCTGGGGTTCAAAAGTCAAACGTCAAACACGTGAGTCGCGTGATA
TTATCAACCTTCTACACGTGGATAAGAAGAAATGTCAGAAAGTGGTCAAG
CTGAAAACCAAAGTCAAGCTCCCTTACCTGGATCTAACCGAAAATGGTTT
CTATTTGATCATACCGGGCGGGAATTACCTGAATACAAATATCCATGCGG
AAGAATCCTTATGTGACGTATCAAGCTATCTCTACAACGCTTGGGATCAC
AAATCAGTCATCTACGGTAAAAACCGGCCTTGTATATCATGTTGCGGCCG
CTTGAAATCAGAAGCAGTCGATGAGTACAATAAAAAGCATGGCTTCCTGT
ATACCCATACTATTGAGTACCAAGAGGATGACGCTAGACTGCAAACCTTA
TCTCTCCTATACACTTCTCCTTCATTTATAACTAAGAAGCCACCACCGAA
GCTACNAGATGACGCTAGACTGCAAACCTTGTCTCTCCTATACACTTCTC
CTTCATTTATAACCAAGAAGCCACCACCGAAGCTACAAGATGGTGAAGAA
GTTATGGAGTATAAGAAAGATGGTAGCAATGTTGGTCATGTTGAGGGGAA
TGTGGATGAGTTTGAAGATTTCGTGAAAGGTTATGATACTGCAAGTGACT
CCGAAGCTGAATGAatgTCACGCATTTCGGTCGATCACGATTCAATCGAA
GATCACGCTGTACACAATGAAGTTCCCGAATTCATGTCGCTTATCAAACA
CTATAAAGAGAAGGGTTGTTATCAGGAAGTCCTTGCAATGAGATACAGAT
ATGGCAAATGCAACCTTTTCCATTTGATAGCACGTAAAAGTACTTTACAA
CTCATCAAAACTTTTTTCGATTACACCGAGAGCATTATGGGTAAAAACTT
TCTTACTTACGAGCTTAACACGACGGTTGATCGCAACGGGCGTACATTTT
TTATCATTGCAGCCAAGCATCTCCAAGAAGAAATCTTAATGtatatttta
aaagaatataACCTAGATCCAGGTTACTATGCTGCCTACAACAAATCGTC
CGCTTTCACATATCTCACCAAACGTAAACTAACCGACTGCATGGTTCGAG
CTCTTGCCTTGATTGACCAAACAAAGTTAAGCGAGGAAGGTTTCAAATGG
TTTCTTGATGACATGGAGTTACTTAAAGATACAATGACCGAGAAAGGGTT
AATCGAGGCAAAATGGATGTCAGCTATGACCTATAGATTCAAACTGGGTG
GGCGAGTTTCCAAAATGCAACCGTTTCAGGAGTCAACGATTGCGTCATAC
GGTGGTGACTTACGTGTCCGTCAAATCTTACGTCATATATCTACGCAACT
TTTCTTCCGTTGGAAATATTACCTTGGGTATAGTTTGTTAGAAGATGTTC
AAATTTTGTACATGATCAAAAAGGCTGATAGGGAAAACCCAAACCCAAAG
CCAATCATATTTGTTGGTTGCACTCCACTAGAGGTTGGCGAGTACATAAA
GGAAGATTACAAAACTCGATCGTTACGTGAAATATTGACCAAAGAATACG
ACTGTCACCAACACGATGAAGAAGGTGATAAACGGTCCCGACGATTTGCT
GCTAAAATTCGTTCAAGATGCTGGGGTTCAAAAGTCAAACGTCAAACACG
TGAGTCGCGTGATATTATCAACCTTCTACACGTGGATAAGAAGAAATGTC
AGAAAGTGGTCAAGCTGAAAACCAAAGTCAAGCTCCCTTACCTGGATCTA
ACCGAAAATGGTTTCTATTTGATCATACCGGGCGGGAATTACCTGAATAC
AAATATCCATGCGGAAGAATCCTTATGTGACGTATCAAGCTATCTCTACA
ACGCTTGGGATCACAAATCAGTCATCTACGGTAAAAACCGGCCTTGTATA
TCATGTTGCGGCCGCTTGAAATCAGAAGCAGTCGATGAGTACAATAAAAA
GCATGGCTTCCTGTATACCCATACTATTGAGTACCAAGAGGATGACGCTA
GACTGCAAACCTTATCTCTCCTATACACTTCTCCTTCATTTATAACTAAG
AAGCCACCACCGAAGCTACNAGATGACGCTAGACTGCAAACCTTGTCTCT
CCTATACACTTCTCCTTCATTTATAACCAAGAAGCCACCACCGAAGCTAC
AAGATGGTGAAGAAGTTATGGAGTATAAGAAAGATGGTAGCAATGTTGGT
CATGTTGAGGGGAATGTGGATGAGTTTGAAGATTTCGTGAAAGGTTATGA
TACTGCAAGTGACTCCGAAGCTGAATGAatgTCACGCATTTCGGTCGATC
ACGATTCAATCGAAGATCACGCTGTACACAATGAAGTTCCCGAATTCATG
TCGCTTATCAAACACTATAAAGAGAAGGGTTGTTATCAGGAAGTCCTTGC
AATGAGATACAGATATGGCAAATGCAACCTTTTCCATTTGATAGCACGTA
AAAGTACTTTACAACTCATCAAAACTTTTTTCGATTACACCGAGAGCATT
ATGGGTAAAAACTTTCTTACTTACGAGCTTAACACGACGGTTGATCGCAA
CGGGCGTACATTTTTTATCATTGCAGCCAAGCATCTCCAAGAAGAAATCT
TAATGtatattttaaaagaatataACCTAGATCCAGGTTACTATGCTGCC
TACAACAAATCGTCCGCTTTCACATATCTCACCAAACGTAAACTAACCGA
CTGCATGGTTCGAGCTCTTGCCTTGATTGACCAAACAAAGTTAAGCGAGG
AAGGTTTCAAATGGTTTCTTGATGACATGGAGTTACTTAAAGATACAATG
ACCGAGAAAGGGTTAATCGAGGCAAAATGGATGTCAGCTATGACCTATAG
ATTCAAACTGGGTGGGCGAGTTTCCAAAATGCAACCGTTTCAGGAGTCAA
CGATTGCGTCATACGGTGGTGACTTACGTGTCCGTCAAATCTTACGTCAT
ATATCTACGCAACTTTTCTTCCGTTGGAAATATTACCTTGGGTATAGTTT
GTTAGAAGATGTTCAAATTTTGTACATGATCAAAAAGGCTGATAGGGAAA
ACCCAAACCCAAAGCCAATCATATTTGTTGGTTGCACTCCACTAGAGGTT
GGCGAGTACATAAAGGAAGATTACAAAACTCGATCGTTACGTGAAATATT
GACCAAAGAATACGACTGTCACCAACACGATGAAGAAGGTGATAAACGGT
CCCGACGATTTGCTGCTAAAATTCGTTCAAGATGCTGGGGTTCAAAAGTC
AAACGTCAAACACGTGAGTCGCGTGATATTATCAACCTTCTACACGTGGA
TAAGAAGAAATGTCAGAAAGTGGTCAAGCTGAAAACCAAAGTCAAGCTCC
CTTACCTGGATCTAACCGAAAATGGTTTCTATTTGATCATACCGGGCGGG
AATTACCTGAATACAAATATCCATGCGGAAGAATCCTTATGTGACGTATC
AAGCTATCTCTACAACGCTTGGGATCACAAATCAGTCATCTACGGTAAAA
ACCGGCCTTGTATATCATGTTGCGGCCGCTTGAAATCAGAAGCAGTCGAT
GAGTACAATAAAAAGCATGGCTTCCTGTATACCCATACTATTGAGTACCA
AGAGGATGACGCTAGACTGCAAACCTTATCTCTCCTATACACTTCTCCTT
CATTTATAACTAAGAAGCCACCACCGAAGCTACNAGATGACGCTAGACTG
CAAACCTTGTCTCTCCTATACACTTCTCCTTCATTTATAACCAAGAAGCC
ACCACCGAAGCTACAAGATGGTGAAGAAGTTATGGAGTATAAGAAAGATG
GTAGCAATGTTGGTCATGTTGAGGGGAATGTGGATGAGTTTGAAGATTTC
GTGAAAGGTTATGATACTGCAAGTGACTCCGAAGCTGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030209XLOC_030209Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047430-proteinTCONS_00047430-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047430-exon-scaffold_128-1491911889:35158..35183TCONS_00047430-exon-scaffold_128-1491911889:35158..35183Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:35158..35183TCONS_00047430-exon-scaffold_128-1510915933:35158..35183Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:35158..35183TCONS_00047430-exon-scaffold_128-1575043694:35158..35183Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:35399..35618TCONS_00047430-exon-scaffold_128-1491911889:35399..35618Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:35399..35618TCONS_00047430-exon-scaffold_128-1510915933:35399..35618Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:35399..35618TCONS_00047430-exon-scaffold_128-1575043694:35399..35618Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:37079..37281TCONS_00047430-exon-scaffold_128-1491911889:37079..37281Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:37079..37281TCONS_00047430-exon-scaffold_128-1510915933:37079..37281Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:37079..37281TCONS_00047430-exon-scaffold_128-1575043694:37079..37281Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:38235..38416TCONS_00047430-exon-scaffold_128-1491911889:38235..38416Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:38235..38416TCONS_00047430-exon-scaffold_128-1510915933:38235..38416Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:38235..38416TCONS_00047430-exon-scaffold_128-1575043694:38235..38416Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:38776..40558TCONS_00047430-exon-scaffold_128-1491911889:38776..40558Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:38776..40558TCONS_00047430-exon-scaffold_128-1510915933:38776..40558Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:38776..40558TCONS_00047430-exon-scaffold_128-1575043694:38776..40558Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:40877..41713TCONS_00047430-exon-scaffold_128-1491911889:40877..41713Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:40877..41713TCONS_00047430-exon-scaffold_128-1510915933:40877..41713Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:40877..41713TCONS_00047430-exon-scaffold_128-1575043694:40877..41713Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:42201..42291TCONS_00047430-exon-scaffold_128-1491911889:42201..42291Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:42201..42291TCONS_00047430-exon-scaffold_128-1510915933:42201..42291Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:42201..42291TCONS_00047430-exon-scaffold_128-1575043694:42201..42291Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1491911889:42639..43938TCONS_00047430-exon-scaffold_128-1491911889:42639..43938Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1510915933:42639..43938TCONS_00047430-exon-scaffold_128-1510915933:42639..43938Clytia hemisphaericaexon
TCONS_00047430-exon-scaffold_128-1575043694:42639..43938TCONS_00047430-exon-scaffold_128-1575043694:42639..43938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:35158..43938 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.357002	0.239805	0.00105442	0.269299	0	0.155243	4.44344e-08	0	8.54762e-05	0.390358	0	0.420256	1.80294	1.70142	0.00319205	2.12997e-09	2.04159e-10	4.20269e-07	4.69038	3.14133	4.9668e-06	0.000176345	2.35256e-07	1.4196	0.336813	0.0231149	4.10246e-05	0.0859662	0.266836	0.373053
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047430 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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