TCONS_00047208 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047208
Unique NameTCONS_00047208
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047208 ID=TCONS_00047208|Name=TCONS_00047208|organism=Clytia hemisphaerica|type=transcript|length=4027bp
ttcagttgcaAGATTACAATatgaaagtattaatataaaagaaatataaa
tcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAACACGT
CCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAAACATT
CAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGTAGCAT
TCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAAGATTA
TTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAGAAATC
ATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGATATTT
ATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTACGTCTC
ATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTATTGCT
ACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAATAAAT
TGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTCACTGG
GTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGGAGCGA
ATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGGTCTTC
ATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGCTGAACGAA
GATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATAAGATTTC
AAGTGTGCATGTCGTAAGGGATTTGGATAATTGGAGAAGCTTAGTGAAAA
AGCACGATAAATTTCTTTTGAACTGGGAGAATGCTAAGTTTTACGAAGAG
AGTGGAAAAGCAAGAAGACGGATTCGTAAAAGTTGCTGTGGCGataaagt
tgatgcaatcacTTATTATGAGAAAGAACTCGAGCTTATTCAAGAAGATC
TGTTcactgaaaaatcaaaagacgGAAAGGAGGTTCTGAATTGCGCTTTT
ATTGTCTTCAAATCCATCAAAACTAAAGAACTTGCACTGAAAAGTGTTTG
GCGCAAAGAGTCAATGACTTTTTCAAAATACCCTGCACCACAGTCCTCAG
AAATAAAATGGAGAGCTTTGAAGTATCCTTATACTGTCAGAAAAATGTTG
GAGCTGGTAGGCTTTATTACAGTGTTTGCTTTGGTGCTATTTTGGGCTGT
CCCTATCACTTTCATATCAACCTTGACCAAATTGGAGTCTTTATCTAAAG
AATTCAAATGGCTTGACTCAAtACTGGCGGGATCATCCAAGATGTTCATC
AGTTTTTTACAAGGCGTATTACCAGTCATTCTCATCGCCGTCTTTTATCT
TATTCTTCCTTATATTTTGTTCTTCATCGCAACTATTCAAGGATTATTCT
CAAACAGCCGTTGTGCTGAAATGGTGTTCAAATGTTTATTTGTATTCCAG
ACGTTCAATACTTTCTTCATCTACATCTTATCCGGATCTGTTCTCCAAAA
CCTCTCGCAAATCGTTCAAGAACCTTTCAAAATACCTAGCTTGCTAGCTA
AATCGCTGCCCAGTCAATCAGGATTTTACGTCAACTACTTGGCTATAACC
TCGTTTGTTGGGTTAGCCATAGAACTCACACGTATATGGCCGTTGATTCG
CATTTCGGTCACCTTGAAATGGTTTGCAAAAACGTCACGCCAAAAGCTGG
AAGCCTGGAAACCGAAGCGTGCTGAATATGAAGTCATGGTATGCTGTACA
TCAATATTCACAAGCATTGTTGTTCTTCTTAATCGGGCTCTCCTTCTCGG
TGCTCTCACCCATCATCGTGCCCTTCGTCGTCTTGTATTTCGCCTTCGCA
TACGTCGTATGGATGTATCAACTGTTACACGTCTATATTCCTGACTATGA
TCACGGTGGCCGGTTCTGGACTTTCGTTTTTAATAGaatgatggtatgcg
TTTTGGTCTTTCAATTATTAATGGTGGGCGTGTTCTTGCTCAAGGAGGTT
TGGTTTGCCGCTGTCTTTTTAGCGCCGCTCATCATTGTTACGGTGGCATT
CTGGCTTTACATTAACGAAACATATCTCCCGTACAGTCGCTACTTGACCG
TCGAAGAAACAATCGGCTTGAAAGGGGCAGAACAACGATTTCTAGAGGAG
GTGAAGAATCGATACATCCTCGATCAAACCGTTCCCGAAGTATTCGAGTT
GAGTACAGACAAACAACCATCGAGTGAAGATTATATTCCAATCGATTCAA
TCAATAATCCGGATACTGACGAAGAAAATCCACAAGACATGAAAGAGAGC
ACGCGACTGCTTGGTATCTGACGATTAGGTCTGGATTTATTGGTTAATCA
TTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAAGTTAGTACTGGACT
TAAAAGATAACCGTACAGATTTCCGGGTAATTAATCTGATGTTCGTTACT
GGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGCGTCGAAATTTCTGG
ATGTTAATTaatgttgttttgttacttCTCAACCCTGTTTAATGAGATTT
AATGTCTAATTTGACATTACCCATTTTCAACTGGCAAATTCGTGGAGAAT
TTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCTTCACGTCctacaaa
attatttttgttagtattttccAAAGGCGTTCACCTTTGAATTCGTGTAG
CTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCATATTATTCATATGT
TTTTTAAcggttttattttctttttttcaatattgtaCATAGTAATGAAG
AACATTATATATTGTaatttttcctgaattttctaGATGTATTATATTAT
GAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTCACAACAGAAGTTGT
CACTCAAAAAGATTGGAgctgaaaatgagtaaaattttcaaagattaatG
ATTTTATACATACATGACGATGATGTCATTATTAATTCAAAgagttttca
taatttttaaattcgAATAGTCAATATcatgtgtcaaaatttgaacatAA
TTAGATAATTAGTTCAccaataaattttgagttttaaacgatTTCAGCCC
CGGGTTTATGTTATGTTTCACAATAAACCCATCTGGACAACCTATATGAC
ACttctaataaaattttattaaaagccAAGAANctctagtttttccgacc
cttacagtgcatttgaggtgccttgaaaaagacacccttagtgcccgcac
atacccgtcggtccttttgcccagctgccccccccgggattaAAAGCCAA
GAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTCTACACCCTAGGCTA
GGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTTTAACATGAGATATT
CTATAATGCAAACTATATTTTTAACATGATATTTATCTTTCGTTCTGTAT
CTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGTAATTCTGCAAACAT
TCGTGATGATGTGGAAACTTCTGACGGTCTTCCATAAAACAAATTGGGAA
AAACTTCGGGGGTTTTACTGACTTATTATAGAGCAAAACTTTGATCCGTt
gggaatagaccttttcataaattacgtcacgagcaacgcttacctcgctt
tcaaaatattgctattgtGATTGAATCCCAGAGGAGCTCATAACAAGTCT
TCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGAAcataatcaccttg
gtaataatttcaaaacgaggcagtggTTGCACTCGAAATAATTTATGAAA
GGTCTATAAGTAGTccgaaaacgaggcaagtgttgtttatgacgtaattt
tgtATAATATGGAAAGACCTCTTCATCACAGgacaaaaaattataataaa
ccACGTTCTTAGAGTGTCAATTTTAAACCATATCGTGTTTTGTAGGGACA
TTGttgtatttttctatttttttcctaAATAAGAATTTCAGATATCATTT
TCATCGGTAATAATTTCAATACAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_123:348478..362054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047208 ID=TCONS_00047208|Name=TCONS_00047208|organism=Clytia hemisphaerica|type=transcript|length=13577bp|location=Sequence derived from alignment at scaffold_123:348478..362054+ (Clytia hemisphaerica)
ttcagttgcaAGATTACAATatgaaagtattaatataaaagaaatataaa
tcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAACACGT
CCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAAACATT
CAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGTAGCAT
TCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAAGATTA
TTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAGAAATC
ATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGATATTT
ATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTACGTCTC
ATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTATTGCT
ACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAATAAAT
TGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTCACTGG
GTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGGAGCGA
ATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGGTCTTC
ATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGGTTTGTATG
ATTCTCTATGACTCTATTctagaaataaatatttttattaaaatttgagg
CCGGGCAGGGAATTATTTAAAGCTTCAGGGCTCTTCTAGAAACACCTTAA
AATCAAATTGCTTGGATCTTTAtgtaaaggttttatttttacataagtgt
ttccgtttcatatcagacacatatttcatatcaggacagtgttttgctat
tgttatgttatgctgatataagcaagaaatgtttttcttttcttctttcg
gACCATTCTTTCTCCACATTCGTGTcgatccaatgtgaaaaagcttgtga
attaaaattgatgagttagcaaacgatatcactcttatttcaaaacaaaa
cctttgattcaagattttaaaattcaagATATTTTGTGTTTAGCTGAACG
AAGATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATAAGGTA
ATAACAATTCTCACTTTATTTATTGTCCTGTTAAAAGTGAAACAGTAATG
AGACAAGACCTCTAGCCTTTATTCCTTTtctgagagagagagagtggtCC
ATCCTATCAGAGGAACTGGcctaaaaaaaatatgttaaatataaatttta
agaaatcaCTACGCTAGGgacaaataagaaaaaaacaaaaaaacactatt
atcaaagatgtaaaagctATAAGAAAATCTAGCATTTCAACATTAAACAT
TTATCAACTTTTTCCATACACCACGATCAAAAACCAGATTATACCAAGAT
GCTCTATTAATATCGAACCATTTAAGAGATTTATACACCCCTCTTCCATA
TGTAAACTCAGGGGAGCCTTTCAAACGACGATTGTGCACCCAACNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAATTTTG
TACTTTTGACCTTAAAAATCGCGCAGAATGCCTCGCAATAGGttagattt
tcacaaaaaactaAAAGCACAACATCTTGAATGACCCAAAATGACTGTTG
ACCTCCTATGCTAAGAGCACTCAAGAAATTCACAAAGAAactaatttgtt
ttaaaaagctatactttagaGACTCTCATGAATGCAAGTTTGTGAAAAAT
TTATGCCTCAGAGACAATAGATGCAAAAGTAGGCGAggatacaaaacaaa
acaaattttggtttaCTAATTTTGGATCATTTTCCACTAAATTTCTGTCA
CTAAATTGCACAGCAATAGATTCTTTGGCTAATGTTGGTTGTTATGTTTT
CATATAGTGATGAAGATAACTGAGATAGGTTTATGGATATGATTGTCTAA
ATGTTGGTTCTTTTCATATAGAAGAACATATAATTATAGTTTTGAGCTTT
CGTAAAACCTCTTATTTAATTGAGGCCTTGCTAAATGTCAGTTCTAGAAT
GTCAAATAATGCAACAGAAGAGAGAAAATTGTTCATACAAATATCTAAAA
GATTAACAAAAGATGATGTTGATGCCATCAAGTTCCTGTATGCAGGAGCC
ATTGGAGAAGGTGTACTGGAAGAAGCAAAAACTAGTTTGCAGTTAATCGC
AATCTTGaaacaaaatggtaaaatagaaaacataaaacaattttgtgaaG
AAGTTCTAGATGATATAGATAGGAAAGATATTTCAAATGACATTCTGGGA
AGACCGACTCCTAATAATGAAGCAggtcaaaataaacaaacaaagaaagt
tgagaaattacCCAATGAATTGTTAGAATATGTTGCAGATCAAATTGCTG
GTGACTGGAAACGATTTGGTAGGAAATTAGCACTTGGTGAGAATGTTTTG
GAACAGATTGAGATTGACAATAGGACAACTTACGAAAgatcttatcaaat
tctgttgAGAtggaaaaaagactttaaaaatcaTGATTGGAAATCATTGG
AGAAAGTCTTATCTGATCTCCCGAGATATGACATTGTCAGAGGAGTAAAA
TCCAAATTCGGGCATATTGTATTTCCAAATAGCAACCCTGGTCCAACTAT
GCATCAAGAGTCAGCTGGTGATGATTCTATCAATAAAGATGAGTTTGCTT
TGATTGGTCCCGGCAATACCAATAGTTCTAGCAACAATATTGAGCAAGGA
GTAGCAGAAATCAAACTTGCTAAGGCTGAACCTAAGGAAAATTGAatgga
attttttctttttagaatttttctatttattatttttgtggCCTTACTTA
GCCCTGCTATCCTTGGTTTATCAGTAACAGTAAATGAATCAAGATAATTC
TATTTTGTTTTGGAATTCTGAAGGTGTATCAATAATTAAGCTATCTTcca
tatgaaaaatataaatcatttcaaaaatatcttttgattatGGTAAATGT
GTTCAAATTGATGTCATacatttttgtacttttaatGTTGTAAGGAATAT
ATTTTTCCTCTCACAACATCACAATTTGTATTACAATGTAAATGATAGGT
CTTATTTTGTAAGTTAATTTTTTGTATCTAGAATTTAGGCTTTGTATAAT
TACAATATTTTCCAGTTCAGTTTCTCTCATTTAAAACATTTCTgataaaa
ttgaatttgaaatgtttcatgacttttgttttcttataaatcaaaatatt
atgagtCATGCAATAGTAATGATTTTTACACCTGCTTTTTCACTTAAATG
TGTGAACAtaatattttgtacattttatgaaaatgtttgattATATTTGG
TTTCAAAgatctttttttataaagatgtactgtttttttgaaatcttgaa
caTTCAAAACATTTGGTAAATCACCAAGGCAAAAACTCTtcacatttatt
tttttttcagttgcaAGATTACAATatgaaagtattaatataaaagaaat
ataaatcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGTTCAATAAAA
CACGTCCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAGCCAGAACAA
ACATTCAAATTTGTTATGGCACTATGTGCAATCATATTTATCTTGGCTGT
AGCATTCTTCACTTATGTCCGGACAAAATTTCGCCAAATCTATGCACCAA
GATTATTGCTTATTGAGAATAAGATGTTTGGTATTGGAAATCTACCAAAG
AAATCATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAAAGATGAAGA
TATTTATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTCGATTCTTAC
GTCTCATGCTTAAATTTGCGCTATGCACTATGCCATATGGTTTAATTGTA
TTGCTACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGATGGGCTCAA
TAAATTGAGCATGTCAAATATTGTGCATGAATCAAAACATTTATGGGCTC
ACTGGGTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTATTTTTGTTGG
AGCGAATGGAAAGTGTATATTCAATATCGTCAACGGTATCTGAAGAAGGG
TCTTCATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTGATGAGGTTT
GTATGATTCTCTATGACTCTATTctagaaataaatatttttattaaaatt
tgaggCCGGGCAGGGAATTATTTAAAGCTTCAGGGCTCTTCTAGAAACAC
CTTAAAATCAAATTGCTTGGATCTTTAtgtaaaggttttatttttacata
agtgtttccgtttcatatctgacacatatttcatatcaggacagtgtttt
GCTATTGTTAggttatgctgatataagcaagaaatgtttttcttttcttc
tttcggACCAATCTTTCTCCACATTCGTGTcgatccaatgtgaaaaagct
tgtgaattaaaattgatgagttagcaaacgatatcactcttatttcaaaa
caaaacctttgattcaagattttaaaattcaagATATTTTGTGTTTAGCT
GAACGAAGATCATTCACTTTATGAGTTTATGGACAAATTGTTCCCGAATA
AGGTAATAACAATTCTCACTTTATTCATTGTCCTGTTAAAAGTGAAACAG
TAATGAGACAAGACCTCTAGCCTTTATTCCTTTTCTAACTGCGATTTAAT
AcaattaaatttgatattttgctaATATTTTAAATAGTAAGATTTTGAAC
AACATCCTTATATAAATAACAGGTTAAACTAATTTTCAATCTGTCTTTTA
GATTTCAAGTGTGCATGTCGTAAGGGATTTGGATAATTGGAGAAGCTTAG
TGAAAAAGCACGATAAATTTCTTTTGAACTGGGAGAATGCTAAGGTATGT
TCTCACACATTATATTATGCCATAAAATATACTATACTTTTAGATAGGGA
AATCTGTACTGTCATAAAGACCACGCTATGAGATATAGAAATTTTGCTAA
ATTCACAAACCATACAAAATCTATGTTAGATTTTTCATTGTACAAACATT
CAGATTTATATTGCAATTTGTTTTCATTATAGTTTTACGAAGAGAGTGGA
AAAGCAAGAAGACGGATTCGTAAAAGTTGCTGTGGCGataaagttgatgc
aatcacTTATTATGAGAAAGAACTCGAGGTATTTTGATAACAACTCAATA
TTTTTACTACTCAACTTTCTTCTGATTACAGCTCACAGAGAATAcccttt
ttgataaaaatccatacaaattttctttcatattcaTGTCTGCCTTGGTT
CACAAGACTCTGTTTTTCCCTGAAACTTTGCTTTGCCAAGGATGAGCTTA
TTGGATATTTTATACAGTTTCTTACTGTTTCCCTGTTCAATTTAACTTCA
TTAAACACTGTAAAatatttgtttgaatttttatttaataaagCTTATTC
AAGAAGATCTGTTcactgaaaaatcaaaagacgGAAAGGAGGTTCTGAAT
TGCGCTTTTATTGTCTTCAAATCCATCAAAACTAAAGAACTTGCACTGAA
AAGTGTTTGGCGCAAAGAGTCAATGACTTTTTCAAAATACCCTGCACCAC
AGTCCTCAGAAATAAAATGGAGAGCTTTGAAGTATCCTTATACTGTCAGG
TACGTGTTTTGAGTAGTAGAGCTCTCATTTATAGTGGGGTGATAGCCAAA
TTTTTACTCCATAAATAACAGTCTCAAGCCAAAAAGTCGTCTGTCCATAA
GCTTTCAACGAAAAATCCTAAAATGTCTAGAGACCATTTTCGAAGAACCT
TTTTCATGGCATTTGGTTTTAACAACAACATGAAAATGTATTTTCATTGA
AAGTGCTTCATCTGTCGTACAGTAATGGTTACTGGCTTGTTTTGAAAGGC
TTTAAACGGAGGCTTTTAATACCAATATTGACTGTTAAACGTAATTTTTC
CATATCACATTCATTACAGAAAAATGTTGGAGCTGGTAGGCTTTATTACA
GTGTTTGCTTTGGTGCTATTTTGGGCTGTCCCTATCACTTTCATATCAAC
CTTGACCAAATTGGAGTCTTTATCTAAAGAATTCAAATGGCTTGACTCAA
GTAAGTGTCATACTTGTTCCGTTCAATAGAAAATCAATGATCTGTAATGG
TTGATATTCTGTTTATCAAAACTATACCACACTGTCCCAAAAATAGCAAT
ACAAACAATTCTGAAGAATACTTGTATTTACCATTTAAATAATCCTTGCT
ATCCATTCAGCCTATCATATGTATAAAAATGTACTAAagtaatttcattg
ttttcttgttttttagtACTGGCGGGATCATCCAAGATGTTCATCAGTTT
TTTACAAGGCGTATTACCAGTCATTCTCATCGCCGTCTTTTATCTTATTC
TTCCTTATGTATGTATCAgaaaacaaacctttttgaTTTACGATTGAATG
TATTACGGTCAGGCACATCCCCGCTGCCATAATATACTTGTAGGTTACTA
TATGCCGGACTATATACAAAGTTTACCTAACGTTGCTTGGTGAAGTGGCA
TACCAACAACTGAAAATTAGAATATGCCTTGATCTCGGGACTGATGTTTA
GTATGGGTCTGGTTTCTGAAAATCATCTTGTCTTATCATCTCATCTTGTT
TTTTAGTAATTTACTAGTCTCAATTTCAAGactttcttttttcataaaaa
gaaaaCAGTATTAATTGAAAAGGAGAAGGACTTTTCAAGCTTGGAATTAT
AATCTAAGGTCCCGATTAGTAGGAGGAAGGGGGTCCCAGGGGGTCCGAAT
AAAAGGGgaggttggaaattgtaccGGAAATATTTCGAAAGTTAATAAAT
GAGACGTTTATTCAGTACCTTAAGAGTTGTTAATTCGTGGTCTAGCTCTA
AAATAATAGTGTCCTATTaaagcttttttcttttcacaatTTCTAGATTT
TGTTCTTCATCGCAACTATTCAAGGATTATTCTCAAACAGCCGTTGTGCT
GAAATGGTGTTCAAATGTTTATTTGTATTCCAGGTATAGAGATATTATAT
TTAATCACatgctttttttaaacaaattggATTTTACTTTGAGATTTCGT
GAGCATACCTTAAGTGGATCATATACGCGAGGGTTATATTAAAATTATAG
ATTATATAAAACCGTAGGTTATTTACCAAAacctctaggaaaatgaaaga
aattagttaaaaaataaaatcacgcGAGAATTGAGTTATTTTTCAATCGC
AAAAACATctactcgcgaaagtttatccacTAAAGATATTTGTAAAATTG
AACAGTAGTATTGTCTCTTGCTTCGTCACTGTGTATGCTCTGTTTACCTC
GAGCCGGTGACGAACCTTTAGTATTTGTACGATCTGTTTGTGGCCCCTAA
GATGAGACCAaataaatttattgttctacgggcccgaccgaccctggtTC
ACCCAAATTTGAAAAgctaataatattgaatttgcaaAGCTGGAGGATGG
GCTTTTGATTTTTCGCAAATATGTTTAAATGAACTTAAAATAGCCCAATG
GAAATGACACGAAAATCGCACGTTAAAAGTTTTCTGcttcaaaatgtcac
aaattttttagacttttaccttccgaccctagattttaggaaatttattt
ttataataccGACCtaccaatatttttctgaagctCTTTCCatggaacaa
aaaaaaattgtttcgcCTAATAGATAAAAAATAACTTCTTATAATATCTC
TTGtaaaatctattttaactttttaatgaATCTAATTTTCCGTTTTTAGA
CGTTCAATACTTTCTTCATCTACATCTTATCCGGATCTGTTCTCCAAAAC
CTCTCGCAAATCGTTCAAGAACCTTTCAAAATACCTAGCTTGCTAGCTAA
ATCGCTGCCCAGTCAATCAGGATTTTACGTCAACTACTTGGCTATAACCT
CGTTTGTTGGGTTAGCCATAGAACTCACACGTATATGGCCGTTGATTCGC
ATTTCGGTCACCTTGAAATGGTAAGAAAGGGTATTTTAAAACTTACTTAA
GCTTACCGGAAAGGTCTAGCCAATACAGATATAACACGGTTGTATCATGA
AGGTAGAGTATCCAGCAACAGTACgcagggttgtgggttcgatccccagc
tgAGTCATACCAAATATTCCCTAAATGGTACTTGCAAACCTACTACTAAC
CAATGCAGAGCAACTTTAATGGATTGAAATATTATGCTTATTGAAAACTC
AGCCGTTTGAAACTACAATAAACTTTCTTATTCGAgcttctattattcaa
atctttctataattcgaacttattctcaGTTTCCATCAGTGAGAAACCTC
TCTTACAATACTCTCTATAATTAaaatctctctataattcgaacaaatag
gATTCCCCGTTTCAGTTCGACTCGCGTTTATtggaacttctattattcga
atctttctataattcgaacttattctcaGTTTCCGTCAGGGAGAAACCCC
TCTTACAATACTTTCTACAATTAaaatctctctataattcgaacaaatag
gATTCCCCGTTCGCGCGAGTCCACTGTACCTTAACGAAAATCCTATCAGT
AAACCCTCTTTctacaatttcatttcatatccATAGTACTTGGTGCATAT
CACAAGAGATGGGAAAGCATTGTGTTAAATAGTTAcacaattttatgatt
tttcttgTTCTGTTTAAGGTTTGCAAAAACGTCACGCCAAAAGCTGGAAG
CCTGGAAACCGAAGCGTGCTGAATATGAAGTCATGGTATGCTGTACATCA
AGTAGATTaaattattttctcaaattttgtttcttttcgcgaaatttaat
ccacgcgaaaattttacATTCTCAATTCGCGAGAAAAAGTCTGCGCGAAA
ATTACTCCTAAGATAGAAATGTTAAATTCTTAACATGGTTCTGcaaatta
tataaaatattgatgcAATTTTCTGACAACTAAAGTCCCTAAATCGTCAT
TTGAAATgtattattttctcttttatttacATTAAGTATTCACAAGCATT
GTTGTTCTTCTTAATCGGGCTCTCCTTCTCGGTGCTCTCACCCATCATCG
TGCCCTTCGTCGTCTTGTATTTCGCCTTCGCATACGTCGTATGGATGTAT
CAACTGTTACACGTCTATATTCCTGACTATGATCACGGTGGCCGGTTCTG
GACTTTCGTTTTTAATAGGTGAGTATACAATCGCTTTCTTATTGGACTAT
CCTTTTTCTTGTGATTATTATCGGGGTTTGGTTTCATTTATTGTTGATCT
GACTGTATATGTATCTTAATTTTGTAGTAGTTTAATGAGATGAAAGAGTA
TTAAGATTTTCCCCATCGAAATTTATCCTGAAGTATTTTTTTCACCAAAA
GAGATTTTCCTTCTTTACTtcatagaatgatggtatgcgTTTTGGTCTTT
CAATTATTAATGGTGGGCGTGTTCTTGCTCAAGGAGGTTTGGTTTGCCGC
TGTCTTTTTAGCGCCGCTCATCATTGTTACGGTGGCATTCTGGCTTTACA
TTAACGAAACATATCTCCCGTACAGTCGCTACTTGACCGTCGAAGAAACA
ATCGGCTTGAAAGGGGCAGAACAACGATTTCTAGAGGTAAGGATTCTCTG
GATGGGATGtagggccgtccacatagtacgtacgcactaaaatgtcgaaa
atcgagtaccccctcccccctgtacgcaagcgtacgcaaatggctatatc
CCCTCTgttaagtacgtactttttcattcaccccccccccccccctgtac
gcaagcgtacgcaaatggctatatcccctctggtaagtacgtagtttttc
attcaccccccccccccccctgtacgcaagcgtgcgcaaatggctatacc
ccctctGGTAAGGGCGTGTTTTttccttcccccccccccccctcggttga
agaaaatttagaattcaaatcgtttggttcggacctttattccatacatg
aaactcaatgtttatcaagaaactttttcttttccttaatGCGTATAAca
agcgtaaaagtcgacaaaaaaacaaaaagggctatgaaaaaattttctct
gcgcacgtacattttcctttgacccctccactccccctgtacgcaagcat
acgcttttgagaagaccccccctcccccgttagtgcgtacgtactatgtg
gacggccccataGGGTGAATTCGGCCAAGTAAGAACGGACTTTCATAATA
CCACGATACAAAGTATTTGTAACCTTGTTAGCGATTAAAACTGAGACGAG
GTTTAAGAAGCTGTTCTCGTCATGGAGAAACCtcgtaaaatactttctat
aatacTGTGGTTAAGTCCCTTGAGCTTTTATGTGTTGCTTTTATGAAAAG
AGTCAACTGCTTATGTGAACTCCTCTGAGttttagcaatattttgaaaac
gatctaAGCGTTGCTCGTGACTTAATTTATGAAAACAGTCTATTAGAATC
TAACATTTCTGTggttcgaacaaataagattccccgatGAATGAAAACAA
ATTGTTCTGGGGACCGGGTAATTTCTTACTTCTTCTTACTCCTTAGACCG
TCACGCAAagtcttttttttgatttttttaaactttcatcaTTATAGGAG
GTGAAGAATCGATACATCCTCGATCAAACCGTTCCCGAAGTATTCGAGTT
GAGTACAGACAAACAACCATCGAGTGAAGATTATATTCCAATCGATTCAA
TCAATAATCCGGATACTGACGAAGAAAATCCACAAGACATGAAAGAGAGC
ACGCGACTGCTTGGTATCTGACGATTAGGTCTGGATTTATTGGTTAATCA
TTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAAGTTAGTACTGGACT
TAAAAGATAACCGTACAGATTTCCGGGTAATTAATCTGATGTTCGTTACT
GGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGCGTCGAAATTTCTGG
ATGTTAATTaatgttgttttgttacttCTCAACCCTGTTTAATGAGATTT
AATGTCTAATTTGACATTACCCATTTTCAACTGGCAAATTCGTGGAGAAT
TTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCTTCACGTCctacaaa
attatttttgttagtattttccAAAGGCGTTCACCTTTGAATTCGTGTAG
CTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCATATTATTCATATGT
TTTTTAAcggttttattttctttttttcaatattgtaCATAGTAATGAAG
AACATTATATATTGTaatttttcctgaattttctaGATGTATTATATTAT
GAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTCACAACAGAAGTTGT
CACTCAAAAAGATTGGAgctgaaaatgagtaaaattttcaaagattaatG
ATTTTATACATACATGACGATGATGTCATTATTAATTCAAAgagttttca
taatttttaaattcgAATAGTCAATATcatgtgtcaaaatttgaacatAA
TTAGATAATTAGTTCAccaataaattttgagttttaaacgatTTCAGCCC
CGGGTTTATGTTATGTTTCACAATAAACCCATCTGGACAACCTATATGAC
ACttctaataaaattttattaaaagccAAGAANctctagtttttccgacc
cttacagtgcatttgaggtgccttgaaaaagacacccttagtgcccgcac
atacccgtcggtccttttgcccagctgccccccccgggattaAAAGCCAA
GAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTCTACACCCTAGGCTA
GGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTTTAACATGAGATATT
CTATAATGCAAACTATATTTTTAACATGATATTTATCTTTCGTTCTGTAT
CTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGTAATTCTGCAAACAT
TCGTGATGATGTGGAAACTTCTGACGGTCTTCCATAAAACAAATTGGGAA
AAACTTCGGGGGTTTTACTGACTTATTATAGAGCAAAACTTTGATCCGTt
gggaatagaccttttcataaattacgtcacgagcaacgcttacctcgctt
tcaaaatattgctattgtGATTGAATCCCAGAGGAGCTCATAACAAGTCT
TCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGAAcataatcaccttg
gtaataatttcaaaacgaggcagtggTTGCACTCGAAATAATTTATGAAA
GGTCTATAAGTAGTccgaaaacgaggcaagtgttgtttatgacgtaattt
tgtATAATATGGAAAGACCTCTTCATCACAGgacaaaaaattataataaa
ccACGTTCTTAGAGTGTCAATTTTAAACCATATCGTGTTTTGTAGGGACA
TTGttgtatttttctatttttttcctaAATAAGAATTTCAGATATCATTT
TCATCGGTAATAATTTCAATACAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030074XLOC_030074Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047208-exon-scaffold_123-1491911889:348478..349168TCONS_00047208-exon-scaffold_123-1491911889:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:348478..349168TCONS_00047208-exon-scaffold_123-1510915933:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:348478..349168TCONS_00047208-exon-scaffold_123-1575043694:348478..349168Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354076..354129TCONS_00047208-exon-scaffold_123-1491911889:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354076..354129TCONS_00047208-exon-scaffold_123-1510915933:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354076..354129TCONS_00047208-exon-scaffold_123-1575043694:354076..354129Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354329..354421TCONS_00047208-exon-scaffold_123-1491911889:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354329..354421TCONS_00047208-exon-scaffold_123-1510915933:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354329..354421TCONS_00047208-exon-scaffold_123-1575043694:354329..354421Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354610..354705TCONS_00047208-exon-scaffold_123-1491911889:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354610..354705TCONS_00047208-exon-scaffold_123-1510915933:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354610..354705TCONS_00047208-exon-scaffold_123-1575043694:354610..354705Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:354971..355176TCONS_00047208-exon-scaffold_123-1491911889:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:354971..355176TCONS_00047208-exon-scaffold_123-1510915933:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:354971..355176TCONS_00047208-exon-scaffold_123-1575043694:354971..355176Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:355497..355627TCONS_00047208-exon-scaffold_123-1491911889:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:355497..355627TCONS_00047208-exon-scaffold_123-1510915933:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:355497..355627TCONS_00047208-exon-scaffold_123-1575043694:355497..355627Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:355844..355935TCONS_00047208-exon-scaffold_123-1491911889:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:355844..355935TCONS_00047208-exon-scaffold_123-1510915933:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:355844..355935TCONS_00047208-exon-scaffold_123-1575043694:355844..355935Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:356474..356560TCONS_00047208-exon-scaffold_123-1491911889:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:356474..356560TCONS_00047208-exon-scaffold_123-1510915933:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:356474..356560TCONS_00047208-exon-scaffold_123-1575043694:356474..356560Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:357327..357547TCONS_00047208-exon-scaffold_123-1491911889:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:357327..357547TCONS_00047208-exon-scaffold_123-1510915933:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:357327..357547TCONS_00047208-exon-scaffold_123-1575043694:357327..357547Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358246..358328TCONS_00047208-exon-scaffold_123-1491911889:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358246..358328TCONS_00047208-exon-scaffold_123-1510915933:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358246..358328TCONS_00047208-exon-scaffold_123-1575043694:358246..358328Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358564..358745TCONS_00047208-exon-scaffold_123-1491911889:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358564..358745TCONS_00047208-exon-scaffold_123-1510915933:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358564..358745TCONS_00047208-exon-scaffold_123-1575043694:358564..358745Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:358953..359163TCONS_00047208-exon-scaffold_123-1491911889:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:358953..359163TCONS_00047208-exon-scaffold_123-1510915933:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:358953..359163TCONS_00047208-exon-scaffold_123-1575043694:358953..359163Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1491911889:360175..362054TCONS_00047208-exon-scaffold_123-1491911889:360175..362054Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1510915933:360175..362054TCONS_00047208-exon-scaffold_123-1510915933:360175..362054Clytia hemisphaericaexon
TCONS_00047208-exon-scaffold_123-1575043694:360175..362054TCONS_00047208-exon-scaffold_123-1575043694:360175..362054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:348478..362054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.16997e-08	0	8.26581e-10	1.11797e-09	2.90633e-10	0.619966	1.74549	0.425016	0.424272	0.336822	0	0.278136	0.387305	0.289089	0	0.0884901	0	0.112948	0	0	0	1.85347e-09	0	9.92623e-11	0.284951	1.65425	3.37397e-09	1.27383e-07	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047208 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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