TCONS_00047164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047164
Unique NameTCONS_00047164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3883

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047164 ID=TCONS_00047164|Name=TCONS_00047164|organism=Clytia hemisphaerica|type=transcript|length=3883bp
AAAGGATCATTGAACTTTTATTGAATCTCAGACAAAAAGTTCTTCCATTT
GAAAGACCTTCAGCACAATTCTTAAGGTGAAAACCACTCAAGCGTACCAT
atctcatcaattattcatAACccattcaaattttcaataatgTAAAATTA
CAATTCGGCATATTCTTAAGACGTAGAACAAGAAAGTTTAGATTCCTTTT
AATTAACTTTAATTGGATGAAGAATTAACCCAATTTAGgggttcaaatta
aaaaaaaatgaggcTTAGGCTGCTAGTATTATTACTAGCCCTAGCTTTAT
GCTTGACAAATGCAAAACCACTGACGGATACCCAAACAGAGGAAAGTCCC
GATGCAACTCCAGAGAAGAAAGACAATACTCCTGAACCAAACACTGAACA
ATCACCAGATGAAGACCAAAAGTCAACAGAAGAGGTTGATCAACCTTCTT
CATCAGAGAAAGAAACATCTACTGAATCACAACCAGAAGAAGCTTCAGAA
TCTGAATCCACCAAGGAGGTAGAAGAATCGAATGATGATACTACTGAAGG
TGCCAAGAAGACTGAAGTCCCTAATAagGACGCCGAAGCATCTGAAGAAT
CGTCAGACGATGTCGCAGATACTGAGGACAACACTGATGATGCTGCCAAG
AGGGATTTCGGCGGTGGACATGAGGGTGGTGGCCATCACGGAGACGAAGG
TGGTCACGAAGGCCAACACGGTCATCACGAACACGACAATCATCATCACG
GTCACCAACATCATGATCATGGTTATGAATTCTATGAAGAATGGGGAGAG
CATGGTGGTCATGAAGGTGAACATCATGGACACCACGAAGGAGGACATCA
CGGTGAGCACGGACATCATCACGGTGGTCACCACGGTGGCGGCGGCGGAT
ACAAACGTGAGAAAGTTGacaaaaccaaaaccaaaactGCTACCCCTCAA
AAAGCTGAAGATGCCACTGACGGTGAAGATGCTTCCAAGAAATGGTGGTT
AGTTGGAGATCACTGGGGAGGTTGGGGTCACTCCCACTGGGGACACCCTC
ACGCTATTGGTGATGGTGGTGGCTGGCAATGGGGTCACCATGGCTTACAC
GGCGGTCACGGTGGTGGCTACGGTGGCGGCTATGGCGGTGGTTTGGGTGG
ATACGGTGGCGGTTATGGCGGCGGTTTGGGTGGATACGGTGGCGGCAACG
GAGGCTACGGAGGAAATGGCGGTGGTTGCGGTCATGGTGGCTGCGGAGGA
GGATATGGTGGCTATGGAGGTCATGGATATGGCGGAAACGGCCATGGTGG
ATGTGGACACGGTGGTTGTGGTGGACACGTTGGTGGTCACTACAAGAGCA
AAATCCCTGACTGTTGCAAATCCAAAGATCCAAAGGTCACCAAGAGATGT
GGATGCCATTTGGGAACAACTGGACACGGTGGGTACCATTTTAGTGATCA
TGGTTCAGGGCATGATAACCATGATCATCGCATCCAAGGCCCATGGAGTT
TCGGATATGACCATTTCGGGGATGATTGGTCTGACTGGGATCATAACACG
CATTCGTTCCGTTATTTGACTGATATGACTCACTTGCCACATGATGATCA
TTGTGGACATGGCCGTGCATGTGTTCCATTGAACGGTGTTCACCGATTCT
CACGATTTTATCCTTCTCTTCATTTTGAAGGTCCAGCTGGTAATGGTTTC
TTCGGAGGACTCGGTGGTGGATACGGAGGACTCGGTGGTGGATATGGTGG
ACTCGGTGGTGGATACGGTGGATTGGGTGGTGGATATGGTGCAGGATCTG
GTGGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATGCCGGT
GGTTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAATTA
CGGTGTATATGGACATTCCGGATGGCCAGTACGCAAATTCGACAACTACC
GTGTTTGTCATAAATGCCACGATCTACCAAGCGGTGGATCACGATGTCTG
TGCAAGAGTGTTCGTCATCATCCATTGTACTTACCTGTTGTTCATCGACC
AGCTCACGTCTACATTGATTGCGATACCAGTGCACACAAATTCGGACACA
ACAGATGTTACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAAACACA
GAGACTGGTGCAGCCAAACAAGGCGTGTTCTATCCATATGCCAACTATGG
TCCATGGTCTGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCACGGTC
ATCACGCTTTTGGAGAAGGTCACGGTTCGGGTCACGGTCAGGGTCAGGGT
CACGGTGGTGGATGCGGTGGATGTGATGGTTGCGGTAATCACGCAGGCGG
TTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACGAAATG
TTGGATTTAGCTTCGGTCATGGCGCCCATCTTCAAGCTTATCATTGTAAA
GATCAAGTTGAGAAAGTGAATGGAGCTGATGACCACGAAGATGCAACCAC
CAAGCGATTCTGCGTTCCCATTGGATACAATGGTGGATACGGTTTCCCAT
ACTTTCACGGATATCCAGGAGTCGGTACGGGACTCTGGGGATGGGGATGG
CCTTGGATCAAGAATAAGGTCCCTGGATCCAAActcaaagaaaagaaagt
gACATCCAAAGATAGCTCAGCATCCAAATCTACCAAGGATACTGCTTCTA
AAGATACAAAGAAGAGTGCTATCCCAAGACGACAAACCAAAAAACAAACC
ATCCATGTTGGTTACGGATACGCAAGTGGCGACAATTATCGCCTCGGATA
CGGAATGGGCGGCATGGGTGGCGTGGCTGGATTCACATCACCCCACGGTG
CACCTTTAACACAGTTCGCACGCTCACGAATTCCAGCTGCTGAATCAACG
AAAGATGTCACCGGTACCAAACGAAACATGGCTTTTTCTCAAGAACCATC
ATCTACAGGATCAATGTTAGGACATCCAGTCACACACCCAGGGTTTACAA
CCATGGGATTCCCAGGGCACGCTGATTCATCTATCGAAGCACAAAAATCA
AGGATCCCaaagaaattgtaaatttatcGCAATCACCAACCTAATGTCTA
ACCTATATTTGTATTACATCCATCCATCCACTCACCATACAAGATGATGT
TATCCTGTTATTAATTGGTGTTATAACGTCCCAATAGTACCATAGTTCGT
CTTTATAATTGTGTTATTCTGTAATACGTAGCTCTTGTAATAACCCCATA
TTTGTTAATGTAGTTTTATGTATGTTTTATTATGTGTGTTAGATCATTTG
TAAGATCACTCATTATAttattaggcgagaccaatttaatttgttgttct
acgggcccgaccgaccctattttcactaaaatcaaaaaaataataatatt
gaattcccactacaatatattttacacactagttatttgtaagaatcaaa
tttgaatataacGATCTGCccttagaacaacaaattaaattggtctcgcc
ttatttAACAAAATAGTCGTGTTATATGATTTTAACCATTTGTACAATAG
ATTTTATTCTAATAGAAAAattaatcaaagtcaatttcacaTTTTATATT
ATCTCCAAGAGTGCAGGTCAAATTTTATCTCACCCGcaaccaaaaaattt
tttcccaaaattgctATCCCgaaaaatctcgttttttctttgtcaatttG
ATTTAGGTTCACATTTATGTTGTCTCCAAGAGTGCAGGTCAAATTTTATC
TCAGCCGCAACCAaaacttttttcccaaaattgctATCCCgaaaaatctc
gttttttctTCCCTATGAGAAGTCAAAGTTACCTCACAAGATTTTAGCAT
TTCCTAGAATGCTTCGTTTAAGTCAAATAGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_123:57524..66929+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047164 ID=TCONS_00047164|Name=TCONS_00047164|organism=Clytia hemisphaerica|type=transcript|length=9406bp|location=Sequence derived from alignment at scaffold_123:57524..66929+ (Clytia hemisphaerica)
AAAGGATCATTGAACTTTTATTGAATCTCAGACAAAAAGTTCTTCCATTT GAAAGACCTTCAGCACAATTCTTAAGGTGAAAACCACTCAAGCGTACCAT atctcatcaattattcatAACccattcaaattttcaataatgTAAAATTA CAATTCGGCATATTCTTAAGACGTAGAACAAGAAAGTTTAGATTCCTTTT AATTAACTTTAATTGGATGAAGAATTAACCCAATTTAGgggttcaaatta aaaaaaaatgaggcTTAGGCTGCTAGTATTATTACTAGCCCTAGCTTTAT GCTTGACAAATGCAAAACCACTGACGGATACCCAAACAGAGGAAAGTCCC GATGGTATGttcaatttttattgttttgcttctttttcatttataacTGA CTGGTTTCAGCAAAGTTGTTTTTCTAGGGTAATATTTATTCCtgagaaat ttttcttgaaagcaTTCCTAATAAAGTCTTTTCTCTTGATAGttgatttt tttcgtttttctctTAATTGTATTTGCATACAGATTCCATTAAATCATGA GTTTTGAGCTTGTGGACAACGCACTTTTTCGTTGTTTGAATTTTCGGTTG GCTAATAAATGCTGAAACTTGCCAGAAAATTATCTTTAATTGTATCAGAA AGAACCGAgaatagattttaaaattgGACTTCGTTTCCTCCGAAAGCTTA AGTTAACCAAGATCAAATACCAAGCTTCTCCAAAAACCTTCTTATAAATT CCCTGGTTATTTCATCTTCTATTCACACATTACAGCAACTCCAGAGAAGA AAGACAATACTCCTGAACCAAACACTGAACAATCACCAGATGAAGACCAA AAGTCAACAGAAGAGGTTGATCAACCTTCTTCATCAGAGAAAGAAACATC TACTGAATCACAACCAGAAGAAGCTTCAGAATCTGAATCCACCAAGGAGG TAGAAGAATCGAATGATGATACTACTGAAGGTGCCAAGAAGACTGAAGTC CCTAATAaggtatttttcttttcttatacaAGTTTGTTGCCAATCTATTG GCATTTTTAAAATCTATGGCTCAAACATGAGGTTTGAAGTACTCACAATT TAGTTAAGCACGAGAATGTTAAAAAAAGACTTTCGAATTCTGTTTGATTA TCTGTTTCATTACAACACTCTAAGTTGAACCGTTTATGGATTTAGAAAAT CACACTGTTATACAAAATATCCAGTCATGGCATAGTACAGTTTGTCGGAA AGATATATTCTACAAAGAAATACACCAGCAAACATTAAATAGTTTTCATG TTTTAAGTAACTAGATGATTTTCGTCCTGAACAAGATGATaggcaaaaaa ttttctttcttttccacaAATGGAATGCAGTCAACGGAGTTGAtgagaaa aaaactgaatttcggTTTTCTGAAAATACTTTTTGTTAATAGTTAGTAGT TTTTTCACGTAACCTTTCCCCATGAAAACAGCTCTGTTGGCTGCTTTTGA TCAAACTTGcatgtttttatcaaatgatgTATATCAATTTGCTGTCCAAA AAAAGCCAATTTTTATGGTGAAAGAATCCTGAAGATTATCCTTTATTGAT CTGGAATGTTCTTAGTTCCCGACCGAATAAGGTACGTGCTTTTCAAAAGC AGCAGTCAACACGGGTTGTTTTTAATGAGAAAGGGCTGTCTCTATCACAC AAacaatttgaaagttttaataatAATTACAAGTCTCAAAGTTTTATTGG GCACAGGCTTTCTCGTAAAGACAGCTCTGTTGATTGCTgaccttttgttt cttttcacttttttttctaatttctgaaaattttgatcAGTTCTTTAAAT AACCTATTTACCTTTCAACCATTGCACAAAAAGGTTGCATGAAAAAAGGT TCTACCGAGGGTCGAATAACGTTAAACGGAGTATCATTGCTTTGCGTTAA CGGAGTCGGTAGTACTGACATTTGACGTCATCGACCCTTGTAAATTGCTC ACACTTATTTCAAGTGTCTTGTTGCTTTTTTACTCCTTTGGTGATTATCG AACGCCGTTGAACGCCATGAACTTGTACTATTAGACAAAATTCTTATCTT AACTTATCTGCTGCATTTTACGCACATTTACTTAATTTACATTTACTTCA TAGCGGAACCAATCTAACCCCAGTTCTTTTATCGcattctcttttttttc atttttagaaaccgaagaagaagaagaaatcttccaaaagcaaGAAAACA AAATCCAAAGCCAAATCTACTAAAGAAATAGACCGTCGATATGGTATGGG CGGTTATGGCGGTGGTATGGGCGGACATCATATGGGTGGACATCACATGG GTGGACACCACATGGGACATCACGGTCACCATGGACACCATGATCACGAT CACGGACATGAGCATTATGAAGAATGGGATCACCATGGAGAGCATGGAGA CCACCACGGTGGAGGACACGGACATCACCACGGTCACCATGGACACCACG ATCACCACGATCATGGTCACCATCATGGTTTCCACCACGATTGGCATCAT GATCATGGAGGTCATCATGGTGGACATCACGGTCATGGAGGTGGAGGAAT GATGGGAGGTGGAGGATACCGTCGTGATGAGCTGACTGCTAACAAGAGGT TTTTCATGCCATTCAGTCCTTTCAGTGGAGGAAATCCTGGACCCTTCAAT GAGGGAATAGTTGATGTTTTTAACATGAATCCACTTCAATGGCCCAACCC CTGGACACGAAATTGGATCGGTGCTAACGAAGGAGGACCACCTGTCTCTG GTGTCTTCAACACACAATACCAAATACCCGCACTTCCTGTTGTAGCCGCT TTGAATTCAGGATTACTAAGCAATTCAGCGGGATCATGGGAAAGTCCGGC AGTGTTGGCTGGTAGCAGAAGATCATTAAAGAGCACTGGATGTCAACCAG GAGATTCTGGTAAACGTGGATGCGGATGTGCTGGTAATCATGAGAAATGC GGTGGACAGGGATACAGCGGTGGGTTTGGTTTGAACCACGGTGATCATTA TGATGATGGCTTCCACGGTGGCCTACATTTCCCACTTGGTGGATGGTATG GTTGGGGTGCATGGCCATGGGGCACTTACGGTGATTTTGTCGGCCACCAT GGTAATGCTGTACCATGTGATGTACCACACCACGAACATCATTTAGATAA CAACAGTGGTTATGATGAAGGTGAAGGACGAGTTGGTCATACCGGTGGCT ACGGTGGTGGTGAATACAGCGGGCATCACGGTGATTGTGGTCACGGACAC GGCGGTTGTGGAGGTCATGATGGACACCATGGATCAGGATACGGTGGATA TGCAGGTCATCACGGTGGTCACGGCAGCTACGGAGGAGTTGGAACACAAA GCGGACACGGTCATCACGGAGGTGGTCATGGTCACGGCGGCTACGGTAAC CACGGAAGTTACGGCGGCCATGGACACGGACATTGTAGAAGTCAAATTCC TAAAAGCACAATCGATAAACCATTCTTACCAATGTCAGCTGTTATGGAAG ACTTTTAGATCAATCAAATAATAATAGCCAATAAACACTATTTATATAAC CGTCatagtattttttcattgattAATATTTAATCTTTTGTCATCCTGTG TTTCGTCTTGTAAATATTCTAGCATCcattattcaaaaagaaaagaagta tGTTTTTGTTAATTATTTTTGAACACGTTTTGATTCGGACAGAACCGGCG GATAGAAGAAGAGATCTCGCATTAATTTTGAATTCGCATTTTATGCTTTT TCATCAACTCCGTTTACTACAATGAAAccttttttaagctaaaaacaTTT AGACCACATATCAAATATCTTCATAgttattcaaaatgaaattaaatttt taaaaaccaacACTTTCGTAAGGACCCCTTTTTAGCCTCATTTTCAAGTA TTGCTTTCCCTTATGACTtgtcaaggaaaatgaaaaacagtGTACTGTAA ACACTGTAAATCTTCTATCTTTCTTAATCAGGACGCCGAAGCATCTGAAG AATCGTCAGACGATGTCGCAGATACTGAGGACAACACTGATGATGCTGCC AAGAGGGATTTCGGCGGTGGACATGAGGGTGGTGGCCATCACGGAGACGA AGGTGGTCACGAAGGCCAACACGGTCATCACGAACACGACAATCATCATC ACGGTCACCAACATCATGATCATGGTTATGAATTCTATGAAGAATGGGGA GAGCATGGTGGTCATGAAGGTGAACATCATGGACACCACGAAGGAGGACA TCACGGTGAGCACGGACATCATCACGGTGGTCACCACGGTGGCGGCGGCG GATACAAACGTGAGAAAGTTGacaaaaccaaaaccaaaactGCTACCCCT CAAAAAGCTGAAGATGCCACTGACGGTGAAGATGCTTCCAAGAAATGGTG GTTAGTTGGAGATCACTGGGGAGGTTGGGGTCACTCCCACTGGGGACACC CTCACGCTATTGGTGATGGTGGTGGCTGGCAATGGGGTCACCATGGCTTA CACGGCGGTCACGGTGGTGGCTACGGTGGCGGCTATGGCGGTGGTTTGGG TGGATACGGTGGCGGTTATGGCGGCGGTTTGGGTGGATACGGTGGCGGCA ACGGAGGCTACGGAGGAAATGGCGGTGGTTGCGGTCATGGTGGCTGCGGA GGAGGATATGGTGGCTATGGAGGTCATGGATATGGCGGAAACGGCCATGG TGGATGTGGACACGGTGGTTGTGGTGGACACGTTGGTGGTCACTACAAGA GCAAAATCCCTGACTGTTGCAAATCCAAAGATCCAAAGGTCACCAAGAGA TGTGGATGCCATTTGGGAACAACTGGACACGGTGGGTACCATTTTAGTGA TCATGGTTCAGGGCATGATAACCATGATCATCGCATCCAAGGCCCATGGA GTTTCGGATATGACCATTTCGGGGATGATTGGTCTGACTGGGATCATAAC ACGCATTCGTTCCGTTATTTGACTGATATGACTCACTTGCCACATGATGA TCATTGTGGACATGGCCGTGCATGTGTTCCATTGAACGGTGTTCACCGAT TCTCACGATTTTATCCTTCTCTTCATTTTGAAGGTCCAGCTGGTAATGGT TTCTTCGGAGGACTCGGTGGTGGATACGGAGGACTCGGTGGTGGATATGG TGGACTCGGTGGTGGATACGGTGGATTGGGTGGTGGATATGGTGCAGGAT CTGGTGGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATGCC GGTGGTTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAA TTACGGTGTATATGGACATTCCGGATGGCCAGTACGCAAATTCGACAACT ACCGTGTTTGTCATAAATGCCACGATCTACCAAGCGGTGGATCACGATGT CTGTGCAAGAGTGTTCGTCATCATCCATTGTACTTACCTGTTGTTCATCG ACCAGCTCACGTCTACATTGATTGCGATACCAGTGCACACAAATTCGGAC ACAACAGATGTTACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAAAC ACAGAGACTGGTGCAGCCAAACAAGGCGTGTTCTATCCATATGCCAACTA TGGTCCATGGTCTGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCACG GTCATCACGCTTTTGGAGAAGGTCACGGTTCGGGTCACGGTCAGGGTCAG GGTCACGGTGGTGGATGCGGTGGATGTGATGGTTGCGGTAATCACGCAGG CGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACGAA ATGTTGGATTTAGCTTCGGTCATGGCGCCCATCTTCAAGCTTATNTCATA ACACGCATTCGTTCCGTTATTTGACTGATATGACTCACTTGCCACATGAT GATCATTGTGGACATGGCCGTGCATGTGTTCCATTGAACGGTGTTCACCG ATTCTCACGATTTTATCCTTCTCTTCATTTTGAAGGTCCAGCTGGTAATG GTTTCTTCGGAGGACTCGGTGGTGGATACGGAGGACTCGGTGGTGGATAT GGTGGACTCGGTGGTGGATACGGTGGATTGGGTGGTGGATATGGTGCAGG ATCTGGTGGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATG CCGGTGGTTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAAC AATTACGGTGTATATGGACATTCCGGATGGCCAGTACGCAAATTCGACAA CTACCGTGTTTGTCATAAATGCCACGATCTACCAAGCGGTGGATCACGAT GTCTGTGCAAGAGTGTTCGTCATCATCCATTGTACTTACCTGTTGTTCAT CGACCAGCTCACGTCTACATTGATTGCGATACCAGTGCACACAAATTCGG ACACAACAGATGTTACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAA ACACAGAGACTGGTGCAGCCAAACAAGGCGTGTTCTATCCATATGCCAAC TATGGTCCATGGTCTGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCA CGGTCATCACGCTTTTGGAGAAGGTCACGGTTCGGGTCACGGTCAGGGTC AGGGTCACGGTGGTGGATGCGGTGGATGTGATGGTTGCGGTAATCACGCA GGCGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACG AAATGTTGGATTTAGCTTCGGTCATGGCGCTCATCTTCAAGCTTATCATT GTAAAGATCAAGTTGAGAAAGTGAATGGAGCTGATGACCACGAAGATGCA ACCACCAAGCGATTCTGCGTTCCCATTGGATACAATGGTGGATACGGTTT CCCATACTTTCACGGATATCCAGGAGTCGGTACGGGACTATGGGGATGGG GATGGCCTTGGATCAAGAATAAGGTCCCTGGANGACTCGGTGGTGGATAC GGAGGACTCGGTGGTGGATATGGTGGACTCGGTGGTGGATACGGTGGATT GGGTGGTGGATATGGTGCAGGATCTGGTGGGTTTGGCCTTGGTGGCGCTG TCGGAGGTTGTGGATGCAATGCCGGTGGTTGCGGTTGCGGCCCTGGTTTC GCTCTTGGTGGTGGCTTGAACAATTACGGTGTATATGGACATTCCGGATG GCCAGTACGCAAATTCGACAACTACCGTGTTTGTCATAAATGCCACGATC TACCAAGCGGTGGATCACGATGTCTGTGCAAGAGTGTTCGCCATCATCCA TTGTACTTACCTGTTGTTCATCGACCAGCTCACGTCTACATTGATTGCGA TACCAGTGCACACAAATTCGGACACAACAGATGTTACGCCAGAGCTGATA TTCCTACTCCTGAAGAAGAAAACACAGAGACTGGTGCAGCCAAACAAGGC GTGTTCTATCCATATGCCAACTATGGTCCATGGTCTGCCTACCCATGGTG GGGAGACTGGTGGGGTGGTCACGGTCATCATTCTTGGGGAGAAGGTCACG GTCAGGGTCACGGTGGTGGATGCGGTGGATGTGGTGGTTGTGGCCATCAC GCAGGCGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGG ACGAAATGTTGGATTTAGCTTCGGTCGTGGCGCTCATCTTCAAGCTTACC ATTGTAAAGATCAAGTTGAGAAAGTGAATGGAGCTGATGACCACGAAGAT GCAACCACCAAGCGATTCTGCGTTCCCATTGGATACAATGGTGGATACGG TTTCCCATACTTTCACGGATATCCAGGAGTCGGTACGGGACTCTGGGGAT GGGGATGGCCTTGGATCAAGAATAAGGTCCCTGGATCCAAActcaaagaa aagaaagtgACATCCAAAGATAGCTCAGCATCCAAATCTACCAAGGATAC TGCTTCTAAAGATACAAAGAAGAGTGCTATCCCAAGACGACAAACCAAAA AACAAACCATCCATGTTGGTTACGGATACGCAAGTGGCGACAATTATCGC CTCGGATACGGAATGGGCGGCATGGGTGGCGTGGCTGGATTCACATCACC CCACGGTGCACCTTTAACACAGTTCGCACGCTCACGAATTCCAGCTGCTG AATCAACGAAAGATGTCACCGGTACCAAACGAAACATGGCTTTTTCTCAA GAACCATCATCTACAGGATCAATGTTAGGACATCCAGTCACACACCCAGG GTTTACAACCATGGGATTCCCAGGGCACGCTGATTCATCTATCGAAGCAC AAAAATCAAGGATCCCaaagaaattgtaaatttatcGCAATCACCAACCT AATGTAAGTTTACCTCAGATTTATAATTTGGCTTTATACAGGGAACTAAT TACGTTACGTTTATGAGAGAAACCTCCTTAGGCTAAAATCAAATGTGATA TTTGTAGATATTTTTTTCTTCGCTTTTGTTATTAAATTTGGACTGAAGTT TTGATTTTGttattgaaaactttttgctttCAATTGATTTTTCATTGACC AATCAAACAAAAGAATCAATCATTATAATTGGTATTGTGATTTATTTTCC TATATTTTATCTTTACAGGTCTAACCTATATTTGTATTACATCCATCCAT CCACTCACCATACAAGATGATGTTATCCTGTTATTAATTGGTGTTATAAC GTCCCAATAGTACCATAGTTCGTCTTTATAATTGTGTTATTCTGTAATAC GTAGCTCTTGTAATAACCCCATATTTGTTAATGTAGTTTTATGTATGTTT TATTATGTGTGTTAGATCATTTGTAAGATCACTCATTATAttattaggcg agaccaatttaatttgttgttctacgggcccgaccgaccctattttcact aaaatcaaaaaaataataatattgaattcccactacaatatattttacac actagttatttgtaagaatcaaatttgaatataacGATCTGCccttagaa caacaaattaaattggtctcgccttatttAACAAAATAGTCGTGTTATAT GATTTTAACCATTTGTACAATAGATTTTATTCTAATAGAAAAattaatca aagtcaatttcacaTTTTATATTATCTCCAAGAGTGCAGGTCAAATTTTA TCTCACCCGcaaccaaaaaattttttcccaaaattgctATCCCgaaaaat ctcgttttttctttgtcaatttGATTTAGGTTCACATTTATGTTGTCTCC AAGAGTGCAGGTCAAATTTTATCTCAGCCGCAACCAaaacttttttccca aaattgctATCCCgaaaaatctcgttttttctTCCCTATGAGAAGTCAAA GTTACCTCACAAGATTTTAGCATTTCCTAGAATGCTTCGTTTAAGTCAAA TAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030066XLOC_030066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047164-exon-scaffold_123-1491911889:57524..57877TCONS_00047164-exon-scaffold_123-1491911889:57524..57877Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1510915933:57524..57877TCONS_00047164-exon-scaffold_123-1510915933:57524..57877Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1575043694:57524..57877TCONS_00047164-exon-scaffold_123-1575043694:57524..57877Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1491911889:58309..58532TCONS_00047164-exon-scaffold_123-1491911889:58309..58532Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1510915933:58309..58532TCONS_00047164-exon-scaffold_123-1510915933:58309..58532Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1575043694:58309..58532TCONS_00047164-exon-scaffold_123-1575043694:58309..58532Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1491911889:61555..63417TCONS_00047164-exon-scaffold_123-1491911889:61555..63417Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1510915933:61555..63417TCONS_00047164-exon-scaffold_123-1510915933:61555..63417Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1575043694:61555..63417TCONS_00047164-exon-scaffold_123-1575043694:61555..63417Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1491911889:65223..65876TCONS_00047164-exon-scaffold_123-1491911889:65223..65876Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1510915933:65223..65876TCONS_00047164-exon-scaffold_123-1510915933:65223..65876Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1575043694:65223..65876TCONS_00047164-exon-scaffold_123-1575043694:65223..65876Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1491911889:66142..66929TCONS_00047164-exon-scaffold_123-1491911889:66142..66929Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1510915933:66142..66929TCONS_00047164-exon-scaffold_123-1510915933:66142..66929Clytia hemisphaericaexon
TCONS_00047164-exon-scaffold_123-1575043694:66142..66929TCONS_00047164-exon-scaffold_123-1575043694:66142..66929Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:57524..66929 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.440003 0.327536 0.282223 0.0876963 4.87307 5.97072 98.6133 106.035 15.7532 15.986 97.143 64.9248 115.523 101.113 98.2409 282.853 138.939 132.895 0.316471 0.503993 75.6511 85.3084 79.7413 79.2454 94.0194 113.338 14.7527 4.79388 0.297418 0.601227
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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