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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047085 ID=TCONS_00047085|Name=TCONS_00047085|organism=Clytia hemisphaerica|type=transcript|length=923bp
ccgAAACTGTGCGgtccatttttaaaaagtattaatcaagaggcccgaac
atgttcgggccatgccgtgggttgTATCTAGGATTTGGAGGGTACCATGC
AAAAGAGCAAAACAAAGCCATaattagaaatagaaattcttgttgataca
aaaaaatattgtatctgttttgaaatttattttgcaatctCGAATTCCAA
GAGTTCCATAAAAAATGTCATTTGACTGTAAATCCCATGTTGTAATTTGA
TCAGTCCAAAGGCTCAATCTCGCTGCCTTAGTCCACAGTGGGGCtgaatt
gtatgcaaagttCTATGATTACGCAAATGAATATAATTAATACACATCCA
AATTTAAAACTAGCCACGTCAACCAGAACAGAGCCAAGTTTCTGAGCAGT
CAGTATGCTAGATGATGTGGAACATTCATACTGTGATTGACTGGAATAAT
CTTGAGGGTCACATTGTTTGTATAtgtaattttttatgaatttcagAATT
TAGTTCTACAAAAAAGAAGAATCCATTTTAGCATTAATTTTCAAGCCAGC
acataaatgatgttttctGCAACCACATCCTTGTAGCATGACCTTTGATG
TGTTTGTGtttggattttcaagagaagggaaagtcatgactcttgactct
ccaccTGCTAACCAACttgatccattttgaaatactgtacttgagtCAAA
CTGCACTGAGGTGACACTACTTTAGAAAATTGttgtttcttaaaattcta
ACGGTAATTTATATCAATAAGATCTCATAAAACTAGAACAAGTTTAgtca
atgctgacaaaataGCACAAGCTTCAACGCACCATATAGGATTCAAACTC
TTGAAAATTACAACCTTCAGCTGTTAGTTCACCGCCTTATCCACTCGGCC
ACACAAATGTGGAAAAGTAGAAC Run BLAST on NCBI transcript from alignment at scaffold_120:90082..91004 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047085 ID=TCONS_00047085|Name=TCONS_00047085|organism=Clytia hemisphaerica|type=transcript|length=923bp|location=Sequence derived from alignment at scaffold_120:90082..91004 (Clytia hemisphaerica)
GTTCTACTTTTCCACATTTGTGTGGCCGAGTGGATAAGGCGGTGAACTAA
CAGCTGAAGGTTGTAATTTTCAAGAGTTTGAATCCTATATGGTGCGTTGA
AGCTTGTGCtattttgtcagcattgacTAAACTTGTTCTAGTTTTATGAG
ATCTTATTGATATAAATTACCGTtagaattttaagaaacaaCAATTTTCT
AAAGTAGTGTCACCTCAGTGCAGTTTGactcaagtacagtatttcaaaat
ggatcaaGTTGGTTAGCAggtggagagtcaagagtcatgactttcccttc
tcttgaaaatccaaaCACAAACACATCAAAGGTCATGCTACAAGGATGTG
GTTGCagaaaacatcatttatgtGCTGGCTTGAAAATTAATGCTAAAATG
GATTCTTCTTTTTTGTAGAACTAAATTctgaaattcataaaaaattacaT
ATACAAACAATGTGACCCTCAAGATTATTCCAGTCAATCACAGTATGAAT
GTTCCACATCATCTAGCATACTGACTGCTCAGAAACTTGGCTCTGTTCTG
GTTGACGTGGCTAGTTTTAAATTTGGATGTGTATTAATTATATTCATTTG
CGTAATCATAGaactttgcatacaattcaGCCCCACTGTGGACTAAGGCA
GCGAGATTGAGCCTTTGGACTGATCAAATTACAACATGGGATTTACAGTC
AAATGACATTTTTTATGGAACTCTTGGAATTCGagattgcaaaataaatt
tcaaaacagatacaatatttttttgtatcaacaagaatttctatttctaa
ttATGGCTTTGTTTTGCTCTTTTGCATGGTACCCTCCAAATCCTAGATAc
aacccacggcatggcccgaacatgttcgggcctcttgattaatacttttt
aaaaatggacCGCACAGTTTcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047085-exon-scaffold_120-1491911889:90082..91004 | TCONS_00047085-exon-scaffold_120-1491911889:90082..91004 | Clytia hemisphaerica | exon |
| TCONS_00047085-exon-scaffold_120-1510915933:90082..91004 | TCONS_00047085-exon-scaffold_120-1510915933:90082..91004 | Clytia hemisphaerica | exon |
| TCONS_00047085-exon-scaffold_120-1575043694:90082..91004 | TCONS_00047085-exon-scaffold_120-1575043694:90082..91004 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_120 | supercontig | scaffold_120:90082..91004 . |
Blast
The following BLAST results are available for this feature:
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