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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046749 ID=TCONS_00046749|Name=TCONS_00046749|organism=Clytia hemisphaerica|type=transcript|length=1085bp
caaaattagccatatttggtgacatttgttttgattttgtatccgctgca
tacaggttgtttacaaatttattcgcaagtactgttatgtccctctAAAA
TTAATAGCTAATTGCTTATAGCAGTAAGATGAGTTCAAATGAAAAAAGGA
TGAAAGATCCTCTGTTAGACATCATACTCTAGTCAAGTttcaaatatttg
atttaaGATTTGATATCGATTTCGCTTTGTCAATAATGACAAGAACATAT
TTTGATGATTATTAAAGGTGTTTGTGTGTTTTAAAGagatttaaaaagcc
ttaaaatctagATTTCATTTGGATACGTGAAAGGTAAAGTTTACTTTTCT
TTATTGAGACTTGTATTATATGTATGGAGTGAAATGAGTGTCATAAATAC
CCAGTTCAGACACTTGACGGAAGTTTGCTACCAATCGGGTCAGTTCAGTT
TATgtagcgatggccaagtggtcaaaggcgtcagcatCTTAAACCAGGGA
TTCGCGGTTCGAATCctcgctccttccaatgttccgttcagttcatagat
agccgagccggctggccgtggacgctgtgaaaataatcgaaagactgtct
aagaGTCCTAAATTACTGGGccatccacgtaaaatatcgactctagaACC
CAATTAAGTCAGTTTAGAACCAGTTTAGACAGagaaatttcctttgtttc
tttTCTGGATTTTGATGGCAGTGGAATTCTATGGTAGTCCCACTCTACTT
CAGTGGGACTATTTGCACCATCCTTATaatataacacccctgtctcgcag
ccagTTGGAGTttcttcccacagtggggatgaaaatttctatcaaaatcc
tGATGGGATTTAGAAATAGTATTAGTCGCTCAGGTCAAAATATCCAGGGG
GAATGGATTTGGAGTGCAACTTcttacattgaatttcaaatggcgATGAA
AATAAGTCTGGgccttgaaattgaaaataggGGCAATGAATATAGAGTCC
AAGAAGgcgaaaccaaaaatatttacttttcaaaagCCCCCCTGGCCCCC
CGGTGGCGTGGGCCCTGAAGTTTCAAGTAGACCTG Run BLAST on NCBI transcript from alignment at scaffold_116:596630..597714 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046749 ID=TCONS_00046749|Name=TCONS_00046749|organism=Clytia hemisphaerica|type=transcript|length=1085bp|location=Sequence derived from alignment at scaffold_116:596630..597714 (Clytia hemisphaerica)
CAGGTCTACTTGAAACTTCAGGGCCCACGCCACCGGGGGGCCAGGGGGGc
ttttgaaaagtaaatatttttggtttcgcCTTCTTGGACTCTATATTCAT
TGCCcctattttcaatttcaaggcCCAGACTTATTTTCATcgccatttga
aattcaatgtaagAAGTTGCACTCCAAATCCATTCCCCCTGGATATTTTG
ACCTGAGCGACTAATACTATTTCTAAATCCCATCaggattttgatagaaa
ttttcatccccactgtgggaagaaACTCCAActggctgcgagacaggggt
gttatattATAAGGATGGTGCAAATAGTCCCACTGAAGTAGAGTGGGACT
ACCATAGAATTCCACTGCCATCAAAATCCAGAaaagaaacaaaggaaatt
tctCTGTCTAAACTGGTTCTAAACTGACTTAATTGGGTtctagagtcgat
attttacgtggatggCCCAGTAATTTAGGACtcttagacagtctttcgat
tattttcacagcgtccacggccagccggctcggctatctatgaactgaac
ggaacattggaaggagcgagGATTCGAACCGCGAATCCCTGGTTTAAGat
gctgacgcctttgaccacttggccatcgctacATAAACTGAACTGACCCG
ATTGGTAGCAAACTTCCGTCAAGTGTCTGAACTGGGTATTTATGACACTC
ATTTCACTCCATACATATAATACAAGTCTCAATAAAGAAAAGTAAACTTT
ACCTTTCACGTATCCAAATGAAATctagattttaaggctttttaaatctC
TTTAAAACACACAAACACCTTTAATAATCATCAAAATATGTTCTTGTCAT
TATTGACAAAGCGAAATCGATATCAAATCttaaatcaaatatttgaaACT
TGACTAGAGTATGATGTCTAACAGAGGATCTTTCATCCTTTTTTCATTTG
AACTCATCTTACTGCTATAAGCAATTAGCTATTAATTTTagagggacata
acagtacttgcgaataaatttgtaaacaacctgtatgcagcggatacaaa
atcaaaacaaatgtcaccaaatatggctaattttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046749-exon-scaffold_116-1491911889:596630..597714 | TCONS_00046749-exon-scaffold_116-1491911889:596630..597714 | Clytia hemisphaerica | exon |
| TCONS_00046749-exon-scaffold_116-1510915933:596630..597714 | TCONS_00046749-exon-scaffold_116-1510915933:596630..597714 | Clytia hemisphaerica | exon |
| TCONS_00046749-exon-scaffold_116-1575043694:596630..597714 | TCONS_00046749-exon-scaffold_116-1575043694:596630..597714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:596630..597714 . |
Blast
The following BLAST results are available for this feature:
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