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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004599 ID=TCONS_00004599|Name=TCONS_00004599|organism=Clytia hemisphaerica|type=transcript|length=922bp
TGTCGATCCATTCTTTGATTCTTCTGAGTAATTACAAATAACTTAGAGGA
CCCCTGAACTAATGAGCCTCTTCCCCTGGACTAAGAACCTACCTCCCTCA
TAGGGGTCAGCCAATCTGACTGATCTTTTGGTAGGACAATAATATTAAAT
AATAAGTAATAAAACTGCACGTCCGCTGTCTTTGGCTGGTTGACAATTGC
CATCATTCCTTGTACTCGAAGTTTAACGTgaataaagataaagaaaaatc
gTTAATACGAATAGCTTATAAGTTTGAGTACACGACCTTACGTTTGATGC
GAGATGACACGTTGACTACCTTAACCCTTTTATAGCGCATGCTCAATATT
TCGCATGCCGTAACTTTCGTCCGTAATCGGTAAGATACTTGATTTCCGCT
TATTTCCAAACATCGGAAATCATGCATCTAAACTCTGTCATTTTATTTCT
CGTTTTTTTGTATAAACCGCTCAGACACGGAGTTCTAGGCCGACTTTTCT
TAGCTTTCTCACTTCTGTTGTTCTTCTTTCTCAAATGTACAGTGGGGATA
TACAACACCGTTGCCTTCTAGGATAGAGATGGCTGGTGGTTTGCAGACAG
CAGGAAGTGCTCACTCCAGGTACCGCACCAGACTCTAGgcatttgctatt
ttttgtagctgagagaaagagctttccaacaataccaaagttgatacctg
aatcatttgtcctggtcgagaaatggcctttgaaagaataaatttcccga
aagaatgatgaactttttgttagcgcgcttgaaaagttaaaaatcaaaat
gtttcagaatgtttcaaaaataattttgttgagctataaacaaaaagatt
gccttaaaagttaaaaagttgaaaaatgcacaaaataaaaaaaaatactt
tgataTCTTATGTCCGCTTTAC Run BLAST on NCBI transcript from alignment at sc0000045:741051..741972 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004599 ID=TCONS_00004599|Name=TCONS_00004599|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at sc0000045:741051..741972 (Clytia hemisphaerica)
GTAAAGCGGACATAAGAtatcaaagtatttttttttattttgtgcatttt
tcaactttttaacttttaaggcaatctttttgtttatagctcaacaaaat
tatttttgaaacattctgaaacattttgatttttaacttttcaagcgcgc
taacaaaaagttcatcattctttcgggaaatttattctttcaaaggccat
ttctcgaccaggacaaatgattcaggtatcaactttggtattgttggaaa
gctctttctctcagctacaaaaaatagcaaatgcCTAGAGTCTGGTGCGG
TACCTGGAGTGAGCACTTCCTGCTGTCTGCAAACCACCAGCCATCTCTAT
CCTAGAAGGCAACGGTGTTGTATATCCCCACTGTACATTTGAGAAAGAAG
AACAACAGAAGTGAGAAAGCTAAGAAAAGTCGGCCTAGAACTCCGTGTCT
GAGCGGTTTATACAAAAAAACGAGAAATAAAATGACAGAGTTTAGATGCA
TGATTTCCGATGTTTGGAAATAAGCGGAAATCAAGTATCTTACCGATTAC
GGACGAAAGTTACGGCATGCGAAATATTGAGCATGCGCTATAAAAGGGTT
AAGGTAGTCAACGTGTCATCTCGCATCAAACGTAAGGTCGTGTACTCAAA
CTTATAAGCTATTCGTATTAAcgatttttctttatctttattcACGTTAA
ACTTCGAGTACAAGGAATGATGGCAATTGTCAACCAGCCAAAGACAGCGG
ACGTGCAGTTTTATTACTTATTATTTAATATTATTGTCCTACCAAAAGAT
CAGTCAGATTGGCTGACCCCTATGAGGGAGGTAGGTTCTTAGTCCAGGGG
AAGAGGCTCATTAGTTCAGGGGTCCTCTAAGTTATTTGTAATTACTCAGA
AGAATCAAAGAATGGATCGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004599-exon-sc0000045-1491911889:741051..741972 | TCONS_00004599-exon-sc0000045-1491911889:741051..741972 | Clytia hemisphaerica | exon |
| TCONS_00004599-exon-sc0000045-1510915933:741051..741972 | TCONS_00004599-exon-sc0000045-1510915933:741051..741972 | Clytia hemisphaerica | exon |
| TCONS_00004599-exon-sc0000045-1575043694:741051..741972 | TCONS_00004599-exon-sc0000045-1575043694:741051..741972 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045 | supercontig | sc0000045:741051..741972 . |
Blast
The following BLAST results are available for this feature:
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