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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046221 ID=TCONS_00046221|Name=TCONS_00046221|organism=Clytia hemisphaerica|type=transcript|length=1036bp
TTATTGGCTTTGCCCTACATTGTTTCAACTTCCAATTGTCTTATAGATTC
CTAAGTCCCCTACTCTTAGGTCCCGAATAAACATACCCCATTTATTAACT
TTCAATGGTTTTCAGATCGTAACCCGTTCCTTTTAGGACCCAACTGTTCT
TTTAAGGGACCCCCTCTCGTTTTAAGGGACCCCCTCTCGTTTTAAGAGAC
CCCCGTCCCGTTCATTGATTTATTAATTTTCTAGTTTTCTCATTTTCAGT
TAAAGTGTAATAATTTTCGAACGTCCGAATTTGTTATCCCATGTTTGATT
TCCATTTTATCAGTAGGAACCGCTTGAAAGTTCATAAAATTAGATAAAAG
CAAAAATTAGAATTTTTTTCAGTCTACCAACTCCCCCCCCCTGTTTATTC
GGACCCTCTGCTTGTTAAATTGAAAAAAAATTCGAACCCCTTTTGTTTTG
AACCACCTACTATTCGGGACCATAGAGTAGGGTATCGCTTTTACACCTTC
CCTTTTCCTGAAACCAAAATAAATTGTTATCAAATTATCGAAGGATTATT
TTCAGAATTTTATCAGTATCATTCCAGAAATGGATGCGTTTCATTAAGAT
ACTTAGACCTGGGATATTTTTTGCCGTATCAGCATTGTGTTCATATTTTT
ATTTTATACAAAAGAAAAAGTTTATTTTAGAACCTACATATGATATATTT
ATATTTTTAGATGTATATAGTTTAAAATGTACATAGTTTTTATTTTGAAG
CATTTTTCTACAGTACCCGGCTAAATGACTGACTTCTGTGCTTTAAGGAT
TTCAAGGCTCCAAGTGCCTCCAATCCATTTTATGTTTGCCAGTCACTATG
TCGAAAATCTTTTAAGCCAAGATATTCTAaacatttttaagttttaagcc
taaatatATTCTTAGAGCGTTCTTATTTccacaattttttgataaaagtg
ttggtaaataaaacctttttaacttaatattttggccatcgaagtcttaa
AGCTTCTTAAGATTCTTAAAGCTCTTTTGACAAAAG Run BLAST on NCBI transcript from alignment at scaffold_106:302945..303980 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046221 ID=TCONS_00046221|Name=TCONS_00046221|organism=Clytia hemisphaerica|type=transcript|length=1036bp|location=Sequence derived from alignment at scaffold_106:302945..303980 (Clytia hemisphaerica)
CTTTTGTCAAAAGAGCTTTAAGAATCTTAAGAAGCTttaagacttcgatg
gccaaaatattaagttaaaaaggttttatttaccaacacttttatcaaaa
aattgtggAAATAAGAACGCTCTAAGAATatatttaggcttaaaacttaa
aaatgttTAGAATATCTTGGCTTAAAAGATTTTCGACATAGTGACTGGCA
AACATAAAATGGATTGGAGGCACTTGGAGCCTTGAAATCCTTAAAGCACA
GAAGTCAGTCATTTAGCCGGGTACTGTAGAAAAATGCTTCAAAATAAAAA
CTATGTACATTTTAAACTATATACATCTAAAAATATAAATATATCATATG
TAGGTTCTAAAATAAACTTTTTCTTTTGTATAAAATAAAAATATGAACAC
AATGCTGATACGGCAAAAAATATCCCAGGTCTAAGTATCTTAATGAAACG
CATCCATTTCTGGAATGATACTGATAAAATTCTGAAAATAATCCTTCGAT
AATTTGATAACAATTTATTTTGGTTTCAGGAAAAGGGAAGGTGTAAAAGC
GATACCCTACTCTATGGTCCCGAATAGTAGGTGGTTCAAAACAAAAGGGG
TTCGAATTTTTTTTCAATTTAACAAGCAGAGGGTCCGAATAAACAGGGGG
GGGGAGTTGGTAGACTGAAAAAAATTCTAATTTTTGCTTTTATCTAATTT
TATGAACTTTCAAGCGGTTCCTACTGATAAAATGGAAATCAAACATGGGA
TAACAAATTCGGACGTTCGAAAATTATTACACTTTAACTGAAAATGAGAA
AACTAGAAAATTAATAAATCAATGAACGGGACGGGGGTCTCTTAAAACGA
GAGGGGGTCCCTTAAAACGAGAGGGGGTCCCTTAAAAGAACAGTTGGGTC
CTAAAAGGAACGGGTTACGATCTGAAAACCATTGAAAGTTAATAAATGGG
GTATGTTTATTCGGGACCTAAGAGTAGGGGACTTAGGAATCTATAAGACA
ATTGGAAGTTGAAACAATGTAGGGCAAAGCCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046221-exon-scaffold_106-1491911889:302945..303980 | TCONS_00046221-exon-scaffold_106-1491911889:302945..303980 | Clytia hemisphaerica | exon |
| TCONS_00046221-exon-scaffold_106-1510915933:302945..303980 | TCONS_00046221-exon-scaffold_106-1510915933:302945..303980 | Clytia hemisphaerica | exon |
| TCONS_00046221-exon-scaffold_106-1575043694:302945..303980 | TCONS_00046221-exon-scaffold_106-1575043694:302945..303980 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_106 | supercontig | scaffold_106:302945..303980 . |
Blast
The following BLAST results are available for this feature:
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