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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045840 ID=TCONS_00045840|Name=TCONS_00045840|organism=Clytia hemisphaerica|type=transcript|length=474bp
GAGAAAATGAAAAGGGAGAATTaaataaatgattaaaaaagaagagcATT
AGAGAAACTGGACAACttacgaaaatatcaaattttcatcgaagcTATCG
GTCGATAGAGTCAACAAACACATGGTCGTTAGTTATATGGTCGTTATATT
CCGCGGTTACAGAAATATATCATACCCAGCAGGTGGTACTGAACAATCTT
AGATACTTGAGAGAGGGAGAAGATTATCAATAACGCTCTGGTTAACTCTA
AGATTTGTCGACAAATTGATAAGAGAAAACGTatgatacacccctgtatc
agtgacccggtcacaGATCCTGTCCGATGGAAACCGGTGAAACAATTACA
AAGAATGACCTAACTCTAACAAGTTCACTGTCaagccattttcagaaatt
tgacttcattgaatttcatcgaaagtttgactttcagaggCTCCGGTGGC
CTTGGTTCTGCTTTAAGTGCGTAC Run BLAST on NCBI transcript from alignment at scaffold_102:346892..347755+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045840 ID=TCONS_00045840|Name=TCONS_00045840|organism=Clytia hemisphaerica|type=transcript|length=864bp|location=Sequence derived from alignment at scaffold_102:346892..347755+ (Clytia hemisphaerica)
GAGAAAATGAAAAGGGAGAATTaaataaatgattaaaaaagaagagcATT
AGAGAAACTGGACAACttacgaaaatatcaaattttcatcgaagcTATCG
GTCGATAGAGTCAACAAACACATGGTCGTTAGTTATATGGTCGTTATATT
CCGCGGTTACAGAAATATATCATACCCAGCAGGTGCNGACAACttacgaa
aatatcaaattttcatcgacGCATCGACCGATAGAGTCAACAAACACATG
GTCGTTAGTTATATGGTCGTTATATTCCGCGGTTGCAGAAATATATCATA
CCCAGCAGGTGCGTATTTCTTTTAATCCCAGAAGAGTCTAGCATACCCAC
AGCTCTGTTTCACATTCACAGGCTAGGTTAGGTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTGTTTTCCCGTTATTTCAGGTGGTACTGAACAATCTTAGATACTTGA
GAGAGGGAGAAGATTATCAATAACGCTCTGGTTAACTCTAAGATTTGTCG
ACAAATTGATAAGAGAAAACGTatgatacacccctgtatcagtgacccgg
tcacaGATCCTGTCCGATGGAAACCGGTGAAACAATTACAAAGAATGACC
TAACTCTAACAAGTTCACTGTCaagccattttcagaaatttgacttcatt
gaatttcatcgaaagtttgactttcagaggCTCCGGTGGCCTTGGTTCTG
CTTTAAGTGCGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045840-exon-scaffold_102-1491911889:346892..347073 | TCONS_00045840-exon-scaffold_102-1491911889:346892..347073 | Clytia hemisphaerica | exon |
| TCONS_00045840-exon-scaffold_102-1510915933:346892..347073 | TCONS_00045840-exon-scaffold_102-1510915933:346892..347073 | Clytia hemisphaerica | exon |
| TCONS_00045840-exon-scaffold_102-1575043694:346892..347073 | TCONS_00045840-exon-scaffold_102-1575043694:346892..347073 | Clytia hemisphaerica | exon |
| TCONS_00045840-exon-scaffold_102-1491911889:347464..347755 | TCONS_00045840-exon-scaffold_102-1491911889:347464..347755 | Clytia hemisphaerica | exon |
| TCONS_00045840-exon-scaffold_102-1510915933:347464..347755 | TCONS_00045840-exon-scaffold_102-1510915933:347464..347755 | Clytia hemisphaerica | exon |
| TCONS_00045840-exon-scaffold_102-1575043694:347464..347755 | TCONS_00045840-exon-scaffold_102-1575043694:347464..347755 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:346892..347755 + |
Blast
The following BLAST results are available for this feature:
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