TCONS_00045887 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045887
Unique NameTCONS_00045887
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2957

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045887 ID=TCONS_00045887|Name=TCONS_00045887|organism=Clytia hemisphaerica|type=transcript|length=2957bp
CNAATATATTCAATTGCTTTACAAGGTGTTTGAGTTTGGTTATGATAGGA
TGAAGAAAAACAATAACCTGAATGAGGCAGCTAGTGGTATCATAGACCAT
AATCCTGGAACACCTGGAAAATCACCAGCCATTCCAAAGAATTTCTCTTT
TAGAACATTAGAAAAACAATTTCATCTGGGAGATATTTGTGAAATATGCA
AAGATGGAATGGagGTCATAATGGAAGATGAAGTAACAAAACGTTTTTCA
GCGGCTGAACTCCCTTCCTGGAATCTACTAACAAGAACAAATGTACATTA
TCAATTCATTagCTTACGTCTTACAATCATTTGGGCACTTGGATTTTTTG
TTCGATACTTCATTTTCTTACCTGTTAGGTTATCTCTCGTTGTATTGGGC
TTTCTCATTATTTTCATATCGATGGCCCTGGCTCCTCATATTTCCAATGA
GGCGACTCGCAAGACGATTTCGAATTGGGGTACACTCCTTGGATTTCGTA
TTCTAGCACGTGGAATTTCTGCAGTGGTTCGATTTCATAATCGGGAAAAT
ATGGCTCAAGGTGGTGGATTGTGCGTTGCTAATCATACTTCACCTCTGGA
TGCTATTCTATTGGCATGTGACAGAAACTATGCATTGATTGGTCAAATGC
AAGGTGGAATTATGGGTATGATGCAGAAAGCCTTACTGAAAGCACAAGAT
CACATCTTTTTTGAACGTGGTGAAATGAAAGATAGGATGTTGGTGGTTAG
AAGgaTGCGTGAGCACGTGGAAGACCCAAATAAAAATCCCATCCTTATTT
TTCCTGAAGGAACTTGTATCAATAATACCTCTGTTATGATGTTTAAGAAA
GGTAGTTTTGAAGTCGGTGGTACCATCTACCCTGTCGCTATTAAGTATGA
CGCAACTTTTGGTAATGCGTTTTGGAATTCCATGAAAGAACCCATGTTAA
CCTATTTGATCAACATGATGACCAGTTGGGCCATCGTATGTGATGTATGG
TACATGCCGCCAACTGAAATCCTAGAGAATGAAAACGCGATAATGTTTGC
TAATCGAGTGAAGAGTGACATTGCGAAGAAAGGTGGCTTAGTCGATCTTG
TTTGGGATGGGGGTTTGAAACGAGCAAGTGTACCGACCAAGTTAAAAGAA
caagaacaaaagaaatatgCCAAGAATATCAAAACGGAATGATGAGAATC
TATGATAGAGTTCATTGGACGAATGGAGAGGGTGTGTAAGCTATTTATTG
TGATGATTGTATTATTGTGATTGGAATGGTGATTAAAATGTGGTACGTTT
ACGTAATTTTGGTTACGCTGACCCACATGGGTTACCGTGACAGCGCAAAT
CAAAAAATCGTATTGTCGAAAAAGTCGTATTTGAGTTTGTTTCGAAACTA
AAACTCGAGATGGTTGTTTATGGTGTTGACCTCAAAAAACTAAATACTGT
CAAGATAACTCTTTGAACGATATCAAGATATTATTGATAGTTataacaga
ttttgaatatttttccgagaatttttagaatattcgtattaaaatttgta
tcaaaatatatatttaagaaaagctaatttttttaacaaatcaTTTAAAG
TAATAAAGTTTTAGTTAGTGTTTATATTTTGACCCAAAATTGAGCCAATG
TCCTTTCACTATTTTTCAATGTCTTTGGAAGAACATTATTGCGCATGTGC
ACGTTGTTTTATAAATAcatcaaaaagtttgataaaatttaaaattaact
GTTCCCGCAAAATGCTGCTATTTTCAGCGTCTTGTGATATTTCAGAGTGG
TTTTGTCCGGTAAGATCTTGAAGCTATGATTGAAGCCCTTATATCCGCCT
AAAATATTCTgtaattatataaaaaaaacattgtcTTTTTGACAATTGAT
TTGAAAGCTGGAATTtatataagatacttcactaattagcattttgaagt
aatagagaatttttttaaaagtttttattcCACGTTAACAAACAACCAAC
TCAAATAAGAGCTTTTCAAAACTCCAACTTGACCCTTGAAATGAGATGTG
ACAAAGGGAACTTTGTCAGCCAGTCAGATATGATAAACATAAATGAATAA
TaatcgagtttttttttttttacaaaaaaaaaggtgCCAAGCGAGAAAAC
TGTGAATcaccttttgaaaattttagtaaTATACCTTTTGATTTGTAATA
GTGGTGAAATGTTAAGGGTACACTACCTTGGGGTAATTCTTTTGTGAAAG
GTCGTGATAAGACAggttttttcaaagatattctgatattcaaggaaaag
aaaaattaacctTTTTCTAGGAAATATCTCTCAAAGAATATTCAATTATA
CAGTGTGTAGATTTATAAAGTATAACCCTCATAATTTatgccaaatttta
tgacttgtatGCTTAATTATTCAATCTCAAATATATATTCATTCATCTTG
AGAATTGAATATCAATTGAGAGGATTGTAATCTTATTTTAATTATTCTAA
GCCCACGAGCTNATGAATGTTGAAAACTTGATTCAAGTTTATTCACTAAG
TTCTTGAAAACATTCTTATCTCTTCATACCATACTCACGCCTTATGATAT
GTGATTGAATGAGAGtgaaaaaagctgaaaagtgagacgagtgcaaatta
cggtattttatcctttgttacgagtgattaatcgttaattgcacgacaaa
acatacgattccgaggtaatcgtcagtaaataatcattagtaaatcatag
ttNCCGTTTATTTGGGGACACACTGTAAGTGTTctagaaatattcaatga
attcTTAAGTATGTGAAATTTTataatgaaatgtttttaaatcaaGCATG
TAGATGGTTTTTACTTTGTTCTCTTTGTGATTATTATTTCatatcatttg
tataaaaaatatttgactgtccataaaaactttaaatataTTATTacaaa
atctcga
Run BLAST on NCBI

transcript from alignment at scaffold_102:294082..306543-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045887 ID=TCONS_00045887|Name=TCONS_00045887|organism=Clytia hemisphaerica|type=transcript|length=12462bp|location=Sequence derived from alignment at scaffold_102:294082..306543- (Clytia hemisphaerica)
CNAATATATTCAATTGCTTTACAAGGTGTTTGAGGTAATTACTTATATTT
CGTACATCATTTTTGAAGTCAATCTAGTGACTTTTTTCTCTAAATAAATG
ATGAGTTTATTTTATTCAACTTTTTATATAATAAATTAGCCCTTTGATTT
TAAAAAAGTAACATGTTTTACAGGTATATGTACTGCAACCTAAATGCCTT
GATTTCATAAGTGACTTTTAATAATGAAAAAAAAAATGTTTGTAAAATTG
TTTCTTTCATCATTATTTTGGATAGATCTGTTTTCTCTTTTCAGTTTGGT
TATGATAGGATGAAGAAAAACAATAACCTGAATGAGGCAGCTAGTGGTAA
ATTCATTCCCTTTTCTTACAATATTTAGAACCAAGATTTTAAGAGTTTTC
TAACATAATTTTTCTGCTACTAATTGGAATCAATTTAGATGTAAAGAAGC
TTATATATTTTCATTCTTAGGTATCATAGACCATAATCCTGGAACACCTG
GAAAATCACCAGCCATTCCAAAGAATTTCTCTTTTAGAACATTAGAAAAA
CAATTTCATCTGGGAGATATTTGTGAAATATGCAAAGATGGAATGGAGGT
AATTTTGAAAATAATAGAGCATCGCTCATCCTAGAATATTTAAAGTATGT
ATTAATCTTTTGCATTGTAGGATCGGGAGAATATTCAAAATTGACACACT
CAAGCCTTATTAATTAGACTTATTAAAATTTATTTAACTCCTTCATCAAA
AAATGCTTCCTATAGGCATGCATAAATTGCTTTTTGCAATGGATCATTTA
GTTGGCAGTCATTGAAACTCTCTCAGTTTGTGATGAATACTTTGTTTATT
TTGTAAAAAAAATAGCGTAATTTTGTAAACAGTACACGTAATTGATATGT
TGTTATTTCAAAGAGGATTTAATCTTGTGGTCAATTTCTTTATGAAAAAT
AAACAATGGCTTGTCATTTATGACAGCCTTCTTATTGTTTGTGACCAAAG
TGTGATCTTTGCTGGACAGCTCAGGGTTTGCACAGAGGTTTTCAAAGACA
TGAAAAAAATTATATTCCTTCCCTAAAAATGATATCGCTAGTCAAACAAT
CTTCTTTTTAGCAAGCTACTATAGAGATAAAAACTCTTCTTGTAAACTTT
CAATATAAATGACCTAAGGTTATCTTTTTAAATTTAGGGGGAAAGTGATT
ATAATAAGTTACAACCCTTTTTAGACCCAAGTGCTATTGGCTCATAAAAC
ATAGAAAACCAGTTTGGTCAATTTTATTTGTTCTGTGACATTCCATTTGA
ATTTTTATTCCACAGTAATTTGTCATCTCATTGTAACGACATCAATTTAA
ATTTGAATCACAAAATATTGAGATATGATTTATTCAAACGAAAAATAAAA
AGAAAAGGCCTCACCTATAATAGGTACTTTATGAGATTTCTGCTGGGATT
AAATTTCGCTGATTTTGTGGATTTGGGTGTCATCCACAAAATTTATGAAT
GGAATTAAAAATGGCATCAAAGATGTGCTAAAATATGCGTATTTCAACAA
TAACATGCACAATTTGGCAGTAAATGGCAGATATTTTGCAGCAAAATTTA
ATCCCCGCAAAATTGATCCCATTAAAGTATTCAAAAAAAAGTTTACTTTA
GCTTTTCCTTTTTTCAATAGATGAAAGCTTAGAATGTTACATGGTAACAT
GGTAAAAATGATATAGTGTCTTGCATGGCATCTCTTCAAAAATTACATTG
AATCCTCCTCTAAAAAATGTTATTTAAACTATTCAGGTCATAATGGAAGA
TGAAGTAACAAAACGTTTTTCAGCGGCTGGTAAGGCTTCATACAAAATCT
AAATAACTCTCTTGATTCAATTTTTTTTTGTCAAACATAAAATTAGTCTA
CCATAAGTTGGTTTTATGTCGAAATCCCTCATCTAATTCGGACAACCTTC
TTTAGAGATAGGAATAATAGGAAGGTCAGAATCACTGATTAAAAAAGATT
TCTTTCTCTCTACCGCTAAGCAGATCAATCAGTGATTTTGACCTTCCTTT
TATTCTCATCTCTAAAAAAAGTTGTTGGAATTAGATGAGGGACGTTGGCA
TTAGACCACTTTACGGTACTTTCTGACTGCTCTTCTATTGCTAGGGGCGG
GAGACTCAGCCAAAAATGGGTGCTGAGTATTATCCGGAGGATAAGGGTTG
ATTTTTTACCTTCCGAAGTCTTTAAAAATAACAAAAAGACAAAAAAAGAA
AATAGTGTCTTTGAGATAAAAATCATTACTGTAAGGGTCACATTTTTTAC
TAAAATTTAGTCTTTCGAAGGCTCTGTTTTCTGAGGTCTGAGGTTTTTTG
ACAAATCTGCGAAATTAAATTCCGCAAACAAGAATATTCTCATGATTTAA
AAAAACACTTATAGAATTGGTGTTTTTGGGGCAAAATAAGCCATATTTTA
AACAAAAAATTCCTCTCAACCGCGAAATTAAATTCCGCGAAACTTCCGAA
TTTTGAGCTGTGAACCGCAAAATTAAATTCTGCGAAAATTTCTTCCCTTA
AGGTACCTTGAAATTCCTATTTCTAATATTTGCTTTATATAATTTCTTTT
AGAACTCCCTTCCTGGAATCTACTAACAAGAACAAATGTACATTATCAAT
TCATTAGGTAAAAATTAATTTTAGTTTGAGGTAACTTGAGGTAATTTTTA
AATCTTTTGATAAAGATAGATGAATAAAAGGTGCATAAATTAAATGATTT
TCGTTTTAGTATGCTAATTGAAGCGTTATTGATTCGTTAATACAGTTTTA
AGAATTATCTTTGAATGAATAAAAATAGCAAAATCATTCGATATGAGTAA
ACCGCATGTATTTTATTTGCATTTCAGCTTACGTCTTACAATCATTTGGG
CACTTGGATTTTTTGTTCGATACTTCATTTTCTTACCTGTTAGGTCAGTT
TGATGCCATTATTAATTATATATTGGAGTGTCTTTAACTCGAACCTCTAT
AACTCGAATGACTTCTTAACTCGAACAAGTTTTATAGTCCCTTCACCGAA
CAATGCCTTATTAATCTAGCTCCAAAAATACACTTTTCTACTTTATGAAT
TACTATCATATTACAGTTTGCTCTCACTAATTCAAACTGAAATGGGAAAT
CTTATTTTGTTTAAAGTACAGACAGAGAGATTCGAATTAGAGATAGTATT
TTAAGAGGAATTTTCCTTGAATGTCTTTTATTCGGAATTGAATAATCGAG
ACATGAAGNGGTTTTTAAAATTAACCTTTGTCTGTTACCAGCTTTTCTCA
ACATTGGCTCATTAGTTTTTATTTAATATATATTTGGGAGAGGTGCAAAA
TAGGTGCAAAAGTGTGACGAAACACAATTATGGAAGAAAAAAAATCTGTT
TTTTGGCATTTTCTGGTGATTTCACCATTAGTTTTTTTTCTGATTTTTTT
GCACAAAGCTGCGTATTAGCAATGCCTAAATATGGCATATAGAGTCCGAT
TAAAATGTACTGGAGATGACCTGTAGGCGTTAATAATGTGCGCGCGCTCT
TTCGCGAGCGTGATGCGTGATGGAAGGCGGTCGTTTCAGTGTGGTTTAGA
TCCACACTGTGACCTAGTTTTAACTTTCGTTTTCAGTCAAGTTTTCTTTA
AATAGAACTTTTCAATGCCCTTTTGTAAGAGAATGAGAGAAGTCTTTGTA
TTTGAAATTCTCACAGGTCACTCACTTTTATATGGACTGTCTGGCTAATT
AAAAAGAATACTTCCAAATCCAAAGTTTAAATTTTGAGAATTTTGAAACG
ATACAAAATATATTTTGTCTCCACGATAATCGCGGAATTTAATCCAGTCA
GATTGTATATTTGTCATTTGAACTATGGGATAATTTTGTATTCACAGCCC
GTTTCGATTGGATTGTTGTAAAAGTTGCCCAAATTATATTAAATAAGAAA
TTTATATTATCTTATTATATTAAATTGTATGAAATATAACGAAGTCATTT
GGCTTTTTCTTTTCAATTGTAGGTTATCTCTCGTTGTATTGGGCTTTCTC
ATTATTTTCATATCGATGGCCCTGGCTCCTCATATTTCCAATGAGGCGTA
AGTATACCTTAATCCCATTAATTTTCCCATACCTTTTACATTCGCACCTT
TACTTTTTGCGCTTTTTACTTTTGCGCACCCGTTGCGAATAGGGTATTCG
CGCACGCTTTTTCGGCAAAGAAACCATAAAGTCAGAAGTTTAATTCACTT
TTACTATGCATATCTTACATACCAGAGGTGTATTTAACTTAATACGTTGA
CTTTTTTAACTTTCCATACACAACATTCTTCCTTTTATTGCCTAGTTTTC
TGTTTGTTAATACGATGCTTTAATGATATCAGTATCACATCTTTTTATCG
TTTTTCGAGAAATCATTTTGTCAACATTAAGTTCATTAAAAGATATGTTG
TTCTTTCTTCAGGACTCGCAAGACGATTTCGAATTGGGGTACACTCCTTG
GATTTCGTATTCTAGCACGTGGAATTTCTGCAGTGGTTCGATTTCATAAT
CGGTATGATAGTGAAGCTTAGTGTTTAGAATATTTTTTTCAGGGTAATGA
GGAAAAGGTGCAATTCGACAAATAGTGACAAAGTTCGTTAAGTTTGAACT
TTTTGTTACACTATAGAACATTATTGAAGTTCCATTTTAAAACTATAAAA
ATAATACCATATCGGCCCTTTTTACGCCGGCCCTAATTTAACGCCGGCCC
TTATTACGCCACAGCCTGATTTTGGGCTTACGCCAATTAGGACCGTAAAT
AACGCCAAAATTTGTTAGAATGGCTATTTATGCTTCAATTTACATTTAAA
ATATCGTTTTCAGTAGTAAACTGTTGAAAATTCCATTAAAAATCACTGAA
GTTTTAGATATGGAATAAAACAACGGATAATGATTTATCTTCGAATCATA
CCCAAAATCCTTTAACTAGAGAAAAATGGTCAAAAATTAACGTCACTTTT
AAGTAAAATTTTCAAAATTTTGGCCCTTTTTACACTGGCCCTTTTAACGT
CGGGCTTTATTACGCCAAGAGCCTAAAAATAACGCCGGTGTAAAATGGGC
CGATAAGGTACTCGTTTACCGTACTGCTGCTTACTCATACCTTCGCAATT
TGTATGGTACAAGATCGTAAAAATCCTAAAGAAAATGATAGAAAACTGGA
AAAATGGAGGGAATTGATATTCTGGCAATTTAGGCAAATTTCTCGCCAAA
ATCATAATAAAATATTTGGACAATAACATTATTTTTGCCTATAGTTGACG
CCCTCTAATTCGATTTTCAAGGAGCATTAGATTTTCATCAAATTATATAT
ATAATAGCATTGTTTATGAGAGTTTCCGCAATATTATCGAATAATGGAGT
GCATTGGTAGAATGTCGAATCTTAGATGTTGTTATATGTTTACAGGGAAA
ATATGGCTCAAGGTGGTGGATTGTGCGTTGCTAATCATACTTCACCTCTG
GATGCTATTCTATTGGCATGTGACAGAAACTATGCATTGGTAAGAGAGCT
TGTTCAATAGATTTTTCGTGTCGTATTTAGCAATCCTATTTTTGCCACTT
AAAGTCTTAAAAATGCAATTCTCCAAACAGATTCCTTGCACATACCTTAT
ATCTCGAATAAAAGAAGGCAAGTAATTTAACGGCCTTGAAATCAACACGC
AAAATATTAACACGAATTTTTCTGTCTTTTCAAGGAAACAGCGGCTAATT
TTAAGTAAGGGGTTTTTAATGACTAGTAATATTCGTGTAATACGGTGTTC
ACTCTAAAGGTCATTGCTCTGGAAAAAAATCTGCCCAGGTTGGCGTTAAG
ATCGATCTTTTTCATCCAGATTTGTCATGTATATTAAATAAGCTTTTGAG
CGCTGTTATTGGCTAAAGCAAAACAATCGGACTAAAATCAAAAGCCAATC
ATAAAGATTAGAACGCTTTCGCTTTCGTTTTTAAACAAAAAGCAACGCGG
CTTTGATTGTTTTAGTTGAACAGCCAAGTCAGACTGTAGTATCTTCGATG
CGTGTACTGTTCTCCAGTTGAGCTAGAATCTGACAATGTCTGTATGTCCG
TCCGAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTCGATTTGGC
TGAAATTTCGCACACTTGTTCCTTGGGTGAATATCTGGGGGCGTTTTTTT
TTTCATTTTTCAAAAATTTAGATTTTTGGGGCCTGGGGACGAGTTTTTCG
CCAAAACGACTGTAAAGCTATGATGGTAGACTTTAAGAATAGGGATATAT
GTAAACATTTGTGAACCCAAGAAAACTTTAATATCTTGATTAGTTTTAAA
TCAATTTTCGTATATGATAAATTGTGGGAAATTAATTTTGCAAAGCAACG
TGTAAACAAAAACCACAAAAGGTTTTCTTTCCTCCGAAGTTATTTATTTT
GAAAGGCTCTGAGGACTAGGACACTATTTTAACGTATATAAAAAAATGAA
AAATGAAGATAAAAACAACCCCAGGTATTCACCCAAGGAACAAGTGTACC
AAACTTCAGCCGAAACGGACAAAGTTATAATATTTGTTACCTAATACTAA
ATATTTGAAATGTTACAATTGGGCTTTCGAATAACAAAATATCTGAAGTT
GAGCCCAGTGCGGTGCCCACGTTCGACTATTTGTAAGAATAGCGGCGCTA
ATGATTTAGACTAAACGCTGATCAGCCTCTATCATGAAGGTTACAATCAT
TAACAAATTTTTCAACAATTCACTCATAGATTGGTCAAATGCAAGGTGGA
ATTATGGGTATGATGCAGAAAGCCTTACTGAAAGCACAAGATCACATCTT
TTTTGAACGTGGTGAAATGAAAGATAGGATGTTGGTGGTTAGAAGGTAGG
TTAAGTGGCAGGAAAATGCCCTCAAAATGAAATTTTGTTTTGAGAAAGAG
AATGAAAAATGAGTAATTGATCAGAATTTTTTTTTTTTGAGGTTTTTGTT
ATAATAAGGGACTTTTTCGATGATTGAAGCAAATTTAAGTCTTGGATGCT
TGACAGTTTGAAATGTGTTATCTCCTTCCGGACTCCCTTGGACTACTTTG
TAGCAAAGTGTATCTCACGTTTATCATTTCGTAGTACACTCTGCACATTG
TCTGTTTGATAAAAAAATTCCCGCACGGAAGCCTCTGCGATGAAGTATGA
TTTATAATTAGCAACCCTTCTCTCGTCGTCTCCTCTCTATCAACCGCACT
CCATCGCAGCGGTCGGTTTGGAAAATCTCAAATCAGAAAAAACAATGACA
ACAGACCCTGTACAGGATAAAAGCAAGTCCGAGAAAATTCATCAAGGCAA
GATATTCAAAGCAAAAGATGAAAATTTTGATTAAAAAACAGCTATATTTC
GTATAGTATCATATACATCATTCAGGCAAAATCAGACCCTGTACAACAAT
GAATTTTGAAATTAGCCTTAGATATCGGGTCTGTGTGCAGACTAGGTGAT
GACTGGTAGAATAGTCAGAAAAAAATGATAACAATCGAACATTTTCTTCT
TTCTTTTCAAAGGATGCGTGAGCACGTGGAAGACCCAAATAAAAATCCCA
TCCTTATTTTTCCTGAAGGTATGTAGACTTGGTTTATGATTGGCTTATTG
CTTAAATTTGTGCATTGTTGGAAATATTTTTCTTTTAATCATTAAAATCA
ATGAAAATAAAAATCGTTTTTAAATGTAGAACCATGCTCTGCCATGCTAA
CAATCATACAAGTTTGATCTGGTTTGATCATGTGAAAAAATTTACAGAAT
TCAAAAAATACTAGAATCGAAAAGTCGTTTTATATTTTTTGAAGAAAGAA
TTGAGATGTATTGCTCCTTTTCCGTAGAGCACTGTCTTTGGTGATGCAAA
CCCACCTTTATTAGTATATTGATAAAAATATACATGGCTTGTAGTTAAAC
TACCTCTTCTTCTTGGAAAAACTTTTACCTTAAAGGAACAAATTTTTCGC
GGTCGAAAGAAATTCGGAAAAATTGCATTTTGCGGGAATTAATTTTCGTA
GTTTTGCCCTATTTTGGATACATTTTTTTCATTTTCTTAGGGATTTTTCA
ATTTTTTTTTAAAGAAAATTGACCAAATTTGTATTTCGCGTGTTCTTATT
TTCGCGGTTTTGCCGAAAAACCGCGAAAAAAGCGAAACTTAGTTCCCGCG
GAAATACTTAAGGTACTTTATTCCGATTCGTCCTTATTTATATCCTATAC
ATCAGCAACTGTAGTGCAGTGATATGGGCTCAAACCCCAGCCGGGTCATA
CCAAAGATTCCCAAAATGGTACTTGATGCCTCTCTGCTTGATGCTCAATA
ATTATGAGAAAGTTCAAAGGTAAGTGGAGCAATCCAGGGAAAAAGAGTGG
CGCCCTCTCTTACCTTCGGGTAGATAGCTATCGGAAAAAGAGCCTTGCCT
CCGACTGCTCCAGTCGCAGACTTACTTGCTTTAAACCCTGCCTCAGCTAA
TAGTTTGTAATAACTGACTTGTGTAAATTCGATTTTTTCATTCTTTCCAG
GAACTTGTATCAATAATACCTCTGTTATGATGTTTAAGAAAGGTAGTTTT
GAAGTCGGTGGTACCATCTACCCTGTCGCTATTAAGGTAGTGTGTAATTT
ATTTCAAAACGTTGCTAGTTTCTATGGAAACACGTCATTTATTAACAATT
CAATAATTTACTTTCTAACGACCTTTACTTTTTCACTACATCGATGTTTA
GAAAGTTGTTTTATTGGCCAAATTTCGTCTTTTGTAATTGTGTGACTTGA
TCGCAATTGGCATTATTTCAGAGTGTTATTTTTTACGGTCTGTATTCTGG
ATATGCAACACTGCTAATCTTTAGATATTTTTCAATTTTTAATGATTGAA
ATTCGATTGATGTTTTTGCTTACGTTAATTTGTAATTTCATGCGAACTTG
TAATTTCCCTCCTAGATTTTGTAATTTCCCGCAAAAGTGAAATTTCCATC
GTTTGGAAATTCATCACCTTTTTCGAATCTCTTACTAACTTCGAAGGCTT
AAGTAAATGATATACTATCCAATTAAAACTCGATTCGCGTTTCTATAACT
TTTTCTATTTTCCAGTGTTAAATTGACGTCTTTCAGAATTGTTAGAATTT
CAATCCAAACCATGAGATTAACCAGGAATCCCATGCTTGTTCTCGTGAAA
TTCGGGATAGATTACCTTCGGTTAAATTTGAAATGTTTTTACTAGTACGA
GTTTTTCCAACCATTTTGACTCATTGGTCTTGAAGACATTGCAATGTTGC
ATATCAAGAATTCGAGATGAGCTGGAGATTTTATAAAATACTTCACTAAT
TGGTCATTTGAAGTAATAGAGATTACGCGTTCGCAAAAATTTCAACCTGT
CCCATAAGATGAATTCCAGCTCTTATGTATGTTTCAACTTTCGTTCTTAG
TATGACGCAACTTTTGGTAATGCGTTTTGGAATTCCATGAAAGAACCCAT
GTTAACCTATTTGATCAACATGATGACCAGTTGGGCCATCGTATGTGATG
TATGGTACATGCCGCCAACTGAAATCCTAGTAAGTTGTTTTAAACAAATC
AATTATATTAATTGTATTTCCGGTTTCACTGTATTGCTCACTATTTATTT
GGGGAAAAGTCTCCAGGTAATTTGAGCAATTTTGAACGCCTTTACAAATA
TTCGGTCATAAGCCCCCTTCCGGGAAAGATTTGATAACCCCTCAAGTTTT
TGGTCACTAATATTTTGAGTTCAAAAGACTTTTTTTCTGACTCCAATTTT
AATGTGCCTGAAAAAAGCGAGAAAGTGAGACGATGAAAATGTGTTCATCT
TTTTTAGGAGAATGAAAACGCGATAATGTTTGCTAATCGAGTGAAGAGTG
ACATTGCGAAGAAAGGTGGCTTAGTCGATCTTGTTTGGTAAGTCAAATTT
AAATAATATTTTGATTGTTTTTATGTCGTTAAAACTTTGTGCAATAGTGT
GAGGATTTCATTCTCAGTTGAGCTTGCTAGAATCTGGAAATGTTTGCCAA
TGTTTCTCTTTGTATTTGGGGAAACCTTTTGGAAAGGCTCATCATTTGGT
AATGGCTGGATTTTCGATGAAATTTGATACACTTTTTTGGGTGAAATATC
TCGTGATGTTTTGTTTTTCCAAAGTTTTGATTTTCTCAAATCGACCGCAT
ACCTTATCGGGGAAAAAAATGTCGGAGTTTTATTTAGTTGGGGGTGTTTG
TCGTTGGGGAAGCTCGAAAATGGATCTTGTAATTCGACGTTTAAAGCACT
AATTTCGGTAAATAAAGGTGTAAAAAAATTAGATTTGAATTTTGGTTGCT
GTATAAAATTTCGGGTAAATGTTTTGGTTGGGGATAAAAAAATCGGGTAC
AAGTTTTGGTCGGGTGATGAAATGTCGGGGAAATATTTTGTCGGGGAAAA
ATTTCGACATTTTTTTCCCCGATAAGGTATAGCGATCCTTTAAACCTAGG
TATACATGGGATAATAGCTGCGCTCTTATACACCTGTTTTGCAGTTTTCA
TAATTATGTTGAACAGTTCTTCTTGATCAGATAATGTTACGTTTCTCTTT
TTCTTGCAGGGATGGGGGTTTGAAACGAGCAAGTGTACCGACCAAGTTAA
AAGAACAAGAACAAAAGAAATATGCCAAGAATATCAAAACGGAATGATGA
GAATCTATGATAGAGTTCATTGGACGAATGGAGAGGGTGTGTAAGCTATT
TATTGTGATGATTGTATTATTGTGATTGGAATGGTGATTAAAATGTGGTA
CGTTTACGTAATTTTGGTTACGCTGACCCACATGGGTTACCGTGACAGCG
CAAATCAAAAAATCGTATTGTCGAAAAAGTCGTATTTGAGTTTGTTTCGA
AACTAAAACTCGAGATGGTTGTTTATGGTGTTGACCTCAAAAAACTAAAT
ACTGTCAAGATAACTCTTTGAACGATATCAAGATATTATTGATAGTTATA
ACAGATTTTGAATATTTTTCCGAGAATTTTTAGAATATTCGTATTAAAAT
TTGTATCAAAATATATATTTAAGAAAAGCTAATTTTTTTAACAAATCATT
TAAAGTAATAAAGTTTTAGTTAGTGTTTATATTTTGACCCAAAATTGAGC
CAATGTCCTTTCACTATTTTTCAATGTCTTTGGAAGAACATTATTGCGCA
TGTGCACGTTGTTTTATAAATACATCAAAAAGTTTGATAAAATTTAAAAT
TAACTGTTCCCGCAAAATGCTGCTATTTTCAGCGTCTTGTGATATTTCAG
AGTGGTTTTGTCCGGTAAGATCTTGAAGCTATGATTGAAGCCCTTATATC
CGCCTAAAATATTCTGTAATTATATAAAAAAAACATTGTCTTTTTGACAA
TTGATTTGAAAGCTGGAATTTATATAAGATACTTCACTAATTAGCATTTT
GAAGTAATAGAGAATTTTTTTAAAAGTTTTTATTCCACGTTAACAAACAA
CCAACTCAAATAAGAGCTTTTCAAAACTCCAACTTGACCCTTGAAATGAG
ATGTGACAAAGGGAACTTTGTCAGCCAGTCAGATATGATAAACATAAATG
AATAATAATCGAGTTTTTTTTTTTTTACAAAAAAAAAGGTGCCAAGCGAG
AAAACTGTGAATCACCTTTTGAAAATTTTAGTAATATACCTTTTGATTTG
TAATAGTGGTGAAATGTTAAGGGTACACTACCTTGGGGTAATTCTTTTGT
GAAAGGTCGTGATAAGACAGGTTTTTTCAAAGATATTCTGATATTCAAGG
AAAAGAAAAATTAACCTTTTTCTAGGAAATATCTCTCAAAGAATATTCAA
TTATACAGTGTGTAGATTTATAAAGTATAACCCTCATAATTTATGCCAAA
TTTTATGACTTGTATGCTTAATTATTCAATCTCAAATATATATTCATTCA
TCTTGAGAATTGAATATCAATTGAGAGGATTGTAATCTTATTTTAATTAT
TCTAAGCCCACGAGCTNATGAATGTTGAAAACTTGATTCAAGTTTATTCA
CTAAGTTCTTGAAAACATTCTTATCTCTTCATACCATACTCACGCCTTAT
GATATGTGATTGAATGAGAGTGAAAAAAGCTGAAAAGTGAGACGAGTGCA
AATTACGGTATTTTATCCTTTGTTACGAGTGATTAATCGTTAATTGCACG
ACAAAACATACGATTCCGAGGTAATCGTCAGTAAATAATCATTAGTAAAT
CATAGTTNCCGTTTATTTGGGGACACACTGTAAGTGTTCTAGAAATATTC
AATGAATTCTTAAGTATGTGAAATTTTATAATGAAATGTTTTTAAATCAA
GCATGTAGATGGTTTTTACTTTGTTCTCTTTGTGATTATTATTTCATATC
ATTTGTATAAAAAATATTTGACTGTCCATAAAAACTTTAAATATATTATT
ACAAAATCTCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029320XLOC_029320Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045887-exon-scaffold_102-1575043694:306510..306543TCONS_00045887-exon-scaffold_102-1575043694:306510..306543Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:306198..306249TCONS_00045887-exon-scaffold_102-1575043694:306198..306249Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:305946..306073TCONS_00045887-exon-scaffold_102-1575043694:305946..306073Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:304715..304757TCONS_00045887-exon-scaffold_102-1575043694:304715..304757Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:303887..303941TCONS_00045887-exon-scaffold_102-1575043694:303887..303941Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:303601..303666TCONS_00045887-exon-scaffold_102-1575043694:303601..303666Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:302447..302521TCONS_00045887-exon-scaffold_102-1575043694:302447..302521Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:301992..302081TCONS_00045887-exon-scaffold_102-1575043694:301992..302081Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:301005..301098TCONS_00045887-exon-scaffold_102-1575043694:301005..301098Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:299649..299764TCONS_00045887-exon-scaffold_102-1575043694:299649..299764Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:298926..298981TCONS_00045887-exon-scaffold_102-1575043694:298926..298981Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:297908..297993TCONS_00045887-exon-scaffold_102-1575043694:297908..297993Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:296965..297093TCONS_00045887-exon-scaffold_102-1575043694:296965..297093Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:296607..296686TCONS_00045887-exon-scaffold_102-1575043694:296607..296686Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1575043694:294082..295934TCONS_00045887-exon-scaffold_102-1575043694:294082..295934Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:306510..306543TCONS_00045887-exon-scaffold_102-1510915933:306510..306543Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:306198..306249TCONS_00045887-exon-scaffold_102-1510915933:306198..306249Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:305946..306073TCONS_00045887-exon-scaffold_102-1510915933:305946..306073Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:304715..304757TCONS_00045887-exon-scaffold_102-1510915933:304715..304757Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:303887..303941TCONS_00045887-exon-scaffold_102-1510915933:303887..303941Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:303601..303666TCONS_00045887-exon-scaffold_102-1510915933:303601..303666Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:302447..302521TCONS_00045887-exon-scaffold_102-1510915933:302447..302521Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:301992..302081TCONS_00045887-exon-scaffold_102-1510915933:301992..302081Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:301005..301098TCONS_00045887-exon-scaffold_102-1510915933:301005..301098Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:299649..299764TCONS_00045887-exon-scaffold_102-1510915933:299649..299764Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:298926..298981TCONS_00045887-exon-scaffold_102-1510915933:298926..298981Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:297908..297993TCONS_00045887-exon-scaffold_102-1510915933:297908..297993Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:296965..297093TCONS_00045887-exon-scaffold_102-1510915933:296965..297093Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:296607..296686TCONS_00045887-exon-scaffold_102-1510915933:296607..296686Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1510915933:294082..295934TCONS_00045887-exon-scaffold_102-1510915933:294082..295934Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:306510..306543TCONS_00045887-exon-scaffold_102-1491911889:306510..306543Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:306198..306249TCONS_00045887-exon-scaffold_102-1491911889:306198..306249Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:305946..306073TCONS_00045887-exon-scaffold_102-1491911889:305946..306073Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:304715..304757TCONS_00045887-exon-scaffold_102-1491911889:304715..304757Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:303887..303941TCONS_00045887-exon-scaffold_102-1491911889:303887..303941Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:303601..303666TCONS_00045887-exon-scaffold_102-1491911889:303601..303666Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:302447..302521TCONS_00045887-exon-scaffold_102-1491911889:302447..302521Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:301992..302081TCONS_00045887-exon-scaffold_102-1491911889:301992..302081Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:301005..301098TCONS_00045887-exon-scaffold_102-1491911889:301005..301098Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:299649..299764TCONS_00045887-exon-scaffold_102-1491911889:299649..299764Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:298926..298981TCONS_00045887-exon-scaffold_102-1491911889:298926..298981Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:297908..297993TCONS_00045887-exon-scaffold_102-1491911889:297908..297993Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:296965..297093TCONS_00045887-exon-scaffold_102-1491911889:296965..297093Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:296607..296686TCONS_00045887-exon-scaffold_102-1491911889:296607..296686Clytia hemisphaericaexon
TCONS_00045887-exon-scaffold_102-1491911889:294082..295934TCONS_00045887-exon-scaffold_102-1491911889:294082..295934Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:294082..306543 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.48086	2.71596	2.59483	1.61013	1.2401	2.58859	4.80061	2.98843	6.51323	6.712	9.44528	4.44773	4.52835	4.61552	2.79	3.66427	5.51557	2.49899	3.50268	4.72728	3.12224	5.18864	4.31139	3.61594	1.68267	2.75032	4.31623	6.92393	13.5248	8.31548
Blast
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BLAST of TCONS_00045887 vs. Swiss-Prot (Human)
Match: GPAT4 (Glycerol-3-phosphate acyltransferase 4 OS=Homo sapiens GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 4.893e-121
Identity = 209/401 (52.12%), Postives = 289/401 (72.07%), Query Frame = 2 
Query:    5 YIQLLYKVFEFGYDRMK-----KNNNLNEA-ASGIIDHNPGTPGKS-PAIPKNFSFRTLEK--QFHLGDICEICKDGMEVIMEDEVTKRFSAAELPSWNLLTRTNVHYQFISLRLTIIWALGFFVRYFIFLPVRLSLVVLGFLIIFISMALAPHISNEATRKTISNWGTLLGFRILARGISAVVRFHNRENMAQGGGLCVANHTSPLDAILLACDRNYALXXXXXXXXXXXXXKALLKAQDHIFFERGEMKDRMLVVRRMREHVEDPNKNPILIFPEGTCINNTSVMMFKKGSFEVGGTIYPVAIKYDATFGNAFWNSMKEPMLTYLINMMTSWAIVCDVWYMPPTEILENENAIMFANRVKSDIAKKXXXXXXXXXXXXKRASVPTKLKEQEQKKYAKNI 1180
            Y++ L K+F +   RM+     KN+ L +   +GII  +P +  +    I ++ S + L+   +F L DI   C+ GME IM+DEVTKRFSA EL SWNLL+RTN ++Q+ISLRLT++W LG  +RY   LP+R++L   G  ++ +   +  ++ N   ++ +S    L+ +RI  R ++A++ +H+REN  + GG+CVANHTSP+D I+LA D  YA++GQ+ GG+MG++Q+A++KA  H++FER E+KDR LV +R+ EHV+D +K PILIFPEGTCINNTSVMMFKKGSFE+G T+YPVAIKYD  FG+AFWNS K  M+TYL+ MMTSWAIVC VWY+PP     +E+A+ FANRVKS IA++GGLVDL+WDGGLKR  V    KE++QK Y+K I
Sbjct:   46 YMKSLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPEFELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFKEFMSKHVHLMCYRICVRALTAIITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREADEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMI 446
The following BLAST results are available for this feature:
BLAST of TCONS_00045887 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPAT44.893e-12152.12Glycerol-3-phosphate acyltransferase 4 OS=Homo sap... [more]
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