TCONS_00045674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045674
Unique NameTCONS_00045674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2851

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045674 ID=TCONS_00045674|Name=TCONS_00045674|organism=Clytia hemisphaerica|type=transcript|length=2851bp
TGCCCTCAATTCAAGCTTTTTACAGTGATACCTGCGCTGAAGTGAAGTTT
GTTGTCGAAATTATACAATCATTCGCTAAATTGAACGTGACAGTATTTGG
GAGACAACAACCGATGCTTGACTTAGATGGGACCAACATTGTTCTTTACT
TACCCAAAAGAATAAATAGATCACAAGAGCTGACAGACAATTTGAGCTTC
TTTCAGCGTAAGGTCAAGGATATTTCGGATGACAATGACACTGAAATTAA
ATATGCTGTGCAGCTGACATCGTTTCATCCAGTTACTTTTGAATGTCCAG
TTATACAAAAGTTAAAAGACAGAAGAACAATTGTGAATGATCTTCTTAGC
AAGGAAGGAAGCCTTCTCAAACTGTGCACCGTTCATGTGGAGAGACCAAA
AATATTACCTGAAACCAGTTCTGATGTTACTGATGAGAAGTTTGAGCTGA
AAATCAGTTGTCCACTCTCTCATACGGAGGAATGTCCCAGAGAAAAAGTG
TCTTGGATCCACGATGAATGCAAGAAAATTATTAAGTACCAGGTCCTTTG
GAAACGTCTCAAATGTGATTGTGGCACGTTTGATCCACGAGATGCAACAT
TCAGATGCAGTGACCCCAACCATGGAATAAAGTATTGCCAACCTAACGAG
CATTCCTTTGAAGAAATGTCGAAGCTAAAGAAAAAGATCACGAATATATT
AATCGTAGGAGAAACTGGTGTGGGGAAATCGACTTGGATCAATTCGATCG
CCAAGTACCTTCTGTATGATACTTTGGAAGAGGCGATGAAGTTGAATGAA
AACACTGCTATCATTCCATCACACTTTTCACATACCAATGAAGAAGGTGA
AACAGTTGATGTTAAGATCGGGGACTTCAAAGGGTATGATAATGAGGACA
CAACGGCATCGTCAACTCAGAAACCAACTTCGTATCTCTTTGACATTGAC
GACGAAAACCAAGTGAAGCTGATTGATACACCAGGTATCGGAGATACTCG
TGGGATCAAAAAggataatgaaaattttgatatgattCTCCATCATATGT
CATACTTTACCGAAATAAATGGTATTTGCATTTTACTGAAACCAAATACT
GCAAGACTTGGAATAATGCTGAGGTTTTGTATCGGAGAATTATTGACCCA
TCTTCATAAATCTGCTGCTCATAACATTATGTTCTGTTTCACAAACTGTC
GTGGAACATTTTATCAGCCTGGAGAAACACTTCCTGTACTAAAGAAAATG
TTGGAAAACTACAAGGAAAGCAACGTCAGAATCACCAAAGAAAATCGTTT
TTGTTTCGACAACGAATCGTTTAGATTACTTGCCTGCCTCCAAAATGGTA
TCAAATTTAGTCCAGAGGATATAAAGGCCTACTCAGCAAGTTGGCAAAGA
GCTGCATCTGAAACACATAAGTTGTTTCAATATGTTTTCAAACTCAAGCC
ACATAAAACAGATGAAACTTTGAGCTTGAACGACACACGCAAATGGATTG
TTGAATTGAGCAGACCGATAGCTGAGATCCAAGAATCGATCCAAGACCGA
ATTGTGCAAGTGgaaaacaagaagaaggagctggaAGATATGAAAGACGG
TGCTAAAGATTTTGATGAGCTTGAAAGATTAAGTGAAATCACTGTCTGGA
CTCCGAAAGTTGTCAATTTAGATTACCCCAGAACAATATGTCGTCATAGA
AATTGTACTGAAGCTATAAAGGTCCATGGAGCTGAAATATTGCAAACTCC
AAAGCCGTGCCATGATCACTGTTATATTGACAGTGTGACGCCTGGAAGAC
CAGGTGATCCTGAGCTCCGTCATTGCATATGCTTCATCGACAAGCTGACA
TGTAACGTATGCGGTCATCATAGAGGAGAGCATCAACATGTCAAATACTA
CACTATCAAAGTCCCAACTAAAACAATCGACCCTAAAACGAAACAAATGA
ttgcaaagaaaaaagataaagctACAATCGTTGTTAAGGTTATTACAGAT
CACAATGAAAGAATCGAGGCAGAAAATCAGGAAATGAAGACCATCATGGA
AATCAGTGCTACGTTTGCTTGTTTCTTAACAAGTTGCTCCCTGGCATGTC
ATAATGATGGTGTCAAAGATCACTTGGATTACCTCATTGATGAGAAAACC
AAACtgggagaaaaagaaaaagtcaaagaattgatcaaaatgaaaaagga
gTACGAAACGCAAAAGGAGATCATAGAAAAAGCCATTAAATCGTCTACTA
TGCAGAAAACTAAATACGATATTGATGTTGAAGGTGCGGCAAAACTTAAA
GCACAGCTTTTTCAATTAAAATACAATGGTCAAACCTTCAAAAAGATGAG
TGAAGATATAGCAAGGGTCGAAGCTGATTATAATTACAAGGAAGTTACAT
ACATCACCAGCACCAAGGCTAAGCGTCTAAAAGGGAAACAAAATAATTCA
CATTATTTGCACCAAAACAACACAGCCCAAGGAGTATCTTATAATCACTC
TCCACCTCCTCCTTATAATCATCATTATGGATACCCTGAACAAAGATCAC
AATACAATCAACCAGGGATGAACCGGATGAACCGTAGGAATAACAACCGA
CAAGTGGAAAACCAAGaggaaaactttttcaaaaggatCACATATTTTGT
TTTCGGCCAATGAGAACAAAAAGGTAAACttgtttctttttgtattttta
cacccttttttataagaatggccaaaaaattaagaatatgctaagaatat
cacgaTCATAAAATTTGGTAATATAACGTAATAATACCATTTTTATAGCA
TTCTCAACTGTAAATTTCCAATTATCCCTCAAAAAAGCTCAATACTTTCA
C
Run BLAST on NCBI

protein sequence of TCONS_00045674-protein

>TCONS_00045674-protein ID=TCONS_00045674-protein|Name=TCONS_00045674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=886bp
PSIQAFYSDTCAEVKFVVEIIQSFAKLNVTVFGRQQPMLDLDGTNIVLYL
PKRINRSQELTDNLSFFQRKVKDISDDNDTEIKYAVQLTSFHPVTFECPV
IQKLKDRRTIVNDLLSKEGSLLKLCTVHVERPKILPETSSDVTDEKFELK
ISCPLSHTEECPREKVSWIHDECKKIIKYQVLWKRLKCDCGTFDPRDATF
RCSDPNHGIKYCQPNEHSFEEMSKLKKKITNILIVGETGVGKSTWINSIA
KYLLYDTLEEAMKLNENTAIIPSHFSHTNEEGETVDVKIGDFKGYDNEDT
TASSTQKPTSYLFDIDDENQVKLIDTPGIGDTRGIKKDNENFDMILHHMS
YFTEINGICILLKPNTARLGIMLRFCIGELLTHLHKSAAHNIMFCFTNCR
GTFYQPGETLPVLKKMLENYKESNVRITKENRFCFDNESFRLLACLQNGI
KFSPEDIKAYSASWQRAASETHKLFQYVFKLKPHKTDETLSLNDTRKWIV
ELSRPIAEIQESIQDRIVQVENKKKELEDMKDGAKDFDELERLSEITVWT
PKVVNLDYPRTICRHRNCTEAIKVHGAEILQTPKPCHDHCYIDSVTPGRP
GDPELRHCICFIDKLTCNVCGHHRGEHQHVKYYTIKVPTKTIDPKTKQMI
AKKKDKATIVVKVITDHNERIEAENQEMKTIMEISATFACFLTSCSLACH
NDGVKDHLDYLIDEKTKLGEKEKVKELIKMKKEYETQKEIIEKAIKSSTM
QKTKYDIDVEGAAKLKAQLFQLKYNGQTFKKMSEDIARVEADYNYKEVTY
ITSTKAKRLKGKQNNSHYLHQNNTAQGVSYNHSPPPPYNHHYGYPEQRSQ
YNQPGMNRMNRRNNNRQVENQEENFFKRITYFVFGQ
Run BLAST on NCBI

transcript from alignment at scaffold_100:402444..408568+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045674 ID=TCONS_00045674|Name=TCONS_00045674|organism=Clytia hemisphaerica|type=transcript|length=6125bp|location=Sequence derived from alignment at scaffold_100:402444..408568+ (Clytia hemisphaerica)
TGCCCTCAATTCAAGCTTTTTACAGTGATACCTGCGCTGAAGTGAAGTTT GTTGTCGAAATTATACAATCATTCGCTAAATTGAACGTGACAGTATTTGG GAGACAACAACCGATGCTTGACTTAGATGGGACCAACATTGTTCTTTACT TACCCAAAAGAATAAATAGATCACAAGAGCTGACAGACAATTTGAGCTTC TTTCAGCGTAAGGTCAAGGATATTTCGGATGACAATGACACTGAAATTAA ATATGCTGTGCAGCTGACATCGTTTCATCCAGTTACTTTTGAATGTCCAG TTATACAAAAGTTAAAAGACAGAAGAACAATTGTGAATGATCTTCTTAGC AAGGAAGGAAGCCTTCTCAAACTGTGCACCGTTCATGTGGAGAGACCAAA AATATTACCTGAAACCAGTTCTGATGTTACTGATGAGAAGTTTGAGCTGA AAATCAGTTGTCCACTCTCTCATACGGAGGAATGTCCCAGAGAAAAAGTG TCTTGGATCCACGATGAATGCAAGAAAATTATTAAGTACCAGGTCCTTTG GAAACGTCTCAAATGTGATTGTGGCACGTTTGATCCACGAGATGCAACAT TCAGATGCAGTGACCCCAACCATGGAATAAAGTATTGCCAACCTAACGAG CATTCCTTTGAAGAAATGTCGAAGCTAAAGAAAAAGATCACGAATATATT AATCGTAGGAGAAACTGGTGTGGGGAAATCGACTTGGATCAATTCGATCG CCAAGTACCTTCTGTATGATACTTTGGAAGAGGCGATGAAGTTGAATGAA AACACTGCTATCATTCCATCACACTTTTCACATACCAATGAAGAAGGTGA AACAGTTGATGTTAAGATCGGGGACTTCAAAGGGTATGATAATGAGGACA CAACGGCATCGTCAACTCAGAAACCAACTTCGTATCTCTTTGACATTGAC GACGAAAACCAAGTGAAGCTGATTGATACACCAGGTATCGGAGATACTCG TGGGATCAAAAAggataatgaaaattttgatatgattCTCCATCATATGT CATACTTTACCGAAATAAATGGTATTTGCATTTTACTGAAACCAAATACT GCAAGACTTGGAATAATGCTGAGGTTTTGTATCGGAGAATTATTGACCCA TCTTCATAAATCTGCTGCTCATAACATTATGTTCTGTTTCACAAACTGTC GTGGAACATTTTATCAGCCTGGAGAAACACTTCCTGTACTAAAGAAAATG TTGGAAAACTACAAGGAAAGCAACGTCAGAATCACCAAAGAAAATCGTTT TTGTTTCGACAACGAATCGTTTAGATTACTTGCCTGCCTCCAAAATGGTA TCAAATTTAGTCCAGAGGATATAAAGGCCTACTCAGCAAGTTGGCAAAGA GCTGCATCTGAAACACATAAGTTGTTTCAATATGTTTTCAAACTCAAGCC ACATAAAACAGATGAAACTTTGAGCTTGAACGACACACGCAAATGGATTG TTGAATTGAGCAGACCGATAGCTGAGATCCAAGAATCGATCCAAGACCGA ATTGTGCAAGTGgaaaacaagaagaaggagctggaAGATATGAAAGACGG TGCTAAAGATTTTGATGAGCTTGAAAGATTAAGTGAAATCACTGTCTGGA CTCCGAAAGTTGTCAATTTAGATTACCCCAGAACAATATGTCGTCATAGA AATTGTACTGAAGCTATAAAGGTAGGTTcttattttctcaattttcacaa ttttcataaaattttatgcttccgaaaaaacagtttttaagcGCTCTGAC CATCATTATTGATTTAGAgagtgtcccgaaaaaaaaaaattctgctaGAC CATTTCTATAAATTcgacaagagccgcaaagatgcggataaatatttcct ttacaaatgataaaataGTTATTGATGTCCTTAATAGATTAAAGTGCTTT ATCTCAGATAACACCAAGTGATAACacacaagtccctaagaatttcaaaa ttccattcatGTAATAAATTGCCAGTATTTATAGGATTATTTCTAAGATA CCTTAtctgggaaaaaaatgtcgggtgaaagtgacgaaaattttgagggg gtgacgaaattttcccccgacgaattttttccccgatattttatcacccg accaaaactttgacccgatttttttatccatgaccaaaacttttaccaaa ttttaaaactcaaaccaaaattaaaatctagttttcctgcacctttatta accgaaattagtgctctGTCCAAAACTTTAGCgctttttgtaaataaact tgCAAACTTCCTATCAGCAAATATAGTAAAAATATCAACCTTCTGCAAGC AAAGCAAAGATTTCAATTTCTTCACAGTAAAAATTGCATCTAAAATCAGA CTGGAGGATGTTTTCTTAGCCTGGTTGTCGATttttaaaccaataaaatt gGAGAAGTGAAGAGCTGAAGCTGTAGCTTGCTCCACACACGGATCTATAT CTGAAATCAAAACAGCAGTTAATTTCATAATGGCGGAATAGAGCCACACA GCCGTGTATAAACAATGGATTGAaagtcattttttaaaatttaaagcaCA ATCAGTGATCATAAAAATGACAGACTACAAAACCTGCAATATTTgctatc attttcaaagttttcatggaATTTCATAGCACTTTTAGCAGATAGCATCT ACAGCATTTATAGTAAGTGAAACATAAATAGGCccttaaacgtcgaatta caagatctttttcgagctagtgaaggaaaccatttcatttggacaattta gttgggtaaaagtgactaaattgtaaatttcgatggggaaaagtgacgaa tttgaaattttggtcgggggaaagtgacgaaaatgcctctagatgacgaa atttttccctgtcgaaaaaaaaaacgaccCCGACCATTTCAAGCCTATAA Actttcttaacatattcttattttcagcattttttaagtaattttgtcca ttttcctaagaaaacaagtgttttagagcccacaaagtcttaaaatagcc ttaaaatgttcttaattcgTTCTTTAAGATTTTCGCCACCGatgccttat gtttttatatagtttgttcttatgaaaaaaacggGTGTGATGTGGTGCGT CTTTTCGGGTGCGATGCGCAAGGTTGTAAGTTAAATCCCCAGTCGTATAA TACCAGAGGCTTTGTACTTAGGGTATATTCactattgagtttaaagcccg agtGGCTAGAGTAGAATTTATaatctttcccaggcaagaaaaagtaaagc cacttatttcccatccagaacgcgcctagaacgcgctGCAATCATGATGA CGGATTgaaccattttttttttgaaatctagtgaTAGATAGATTTCAAGC CGGCGTTTGTGCTATAACgacacgcgcgggcgttctggctGTGAAATATC ATCAAATGCTTTTATGGTAAAACAATATTTCTATCAGTGAGAAGGCAATC CTTGAAGTGTGTACATCAAAGTGAATTCTCGTTttatttcgaaaagtttt ttaagTTCATTCTTTAAACATTTCAAGTTACTTCAAATCTACGCCAAAGA AACAAAGGCAATGATTACTATCGCTTGAACATTTTACTTACATCAGCAAG AAGTACTACTAGTGTATTTCAAGCTAATGGTCTTAACGTGtttgaatcct aaaaatttttctGTCGATAGAACGAGGAAAGTCtaggaaagaaaataatt tttactacGTCTTTCTGATGTACGCGAAGCGTTCAAGCGAGTGTAATCAT TGCTTTTGTTTCTCTGGTGTAGGTTTTCAATCACTtgaaacgttgaaaca atgaaCTTAAATTACCTAACGGTTCAAAATACAACGAATTCACGTCGATA TACACACTTCATGGTTGTCTTCTCACTGATAAAAGTATTGTTTTACCATT AAGGGGACGTGCAGGGTTTGCGATTTctgaaataccgaataatttcgCTA cgtaaaatttccgaaattctgtaaaaaaaatacttgcaattccgataccg atttctTTGGGTAATTTTCCtcattttgactaatttttcatcaaatttga ttttttatgtatgaattccgaaaaagggggataaaaacctTATGATACGG AAATTCCGAAGCagaaattcatggatttccgataccgaaacaatttcagc attccgaaatacataataaaagaatataataaaatttaataaaatgcatt aaaaatgtcGACACTCTTCTTAGAGGTAGGATTAaaaggaaggtcggaat cactgatagaaaaaaaaaatttcctctctgacCGTTTATTAGcgatcagc gattccgaccatTTATTATCCCAAGTTTGGAGAAAGATCATTAGATCTAC TTACTGTACACTGTCTTATTACCGTGAAAAACACAGGCCGAAATCATAGA TTGACCTGTgtcgaccaatccagattctatttagcgcgcaatcaacgcaa agaaaagtaaccatgatcttggatgaagttcaaagttgatattttaattc ccgtcgttgaaaacacaactcaaaagtGTCATCAATGCTTATTAAAAAGA GTCAGttatagagaatcataacataaattaaagtctgtctattatttcga ttcaattaaagtaacGTTTCcaaaattaatagtttagtaattactgttct atacatttggggatcatgtaaaagatttctttcgaaaaaagctcatttca attacacttggaggtttctggggaattcataagtagtaaactgcatactg atacagtctgctagacattaatatggtaatattttctcttcatctttgat tctttctaccagtgattagattgacacatgcgcgataaaatttctattat ttatcTTCAGAGGTTGAGACATTCTTTGAagactcaacctctgatactca gagTCCTATATAATTGGACATTTATTGGAGTTTATTTGTTAATAGGTCCA TGGAGCTGAAATATTGCAAACTCCAAAGCCGTGCCATGATCACTGTTATA TTGACAGTGTGACGCCTGGAAGACCAGGTGATCCTGAGCTCCGTCATTGC ATATGCTTCATCGACAAGCTGACATGTAACGTATGCGGTCATCATAGAGG AGAGCATCAACATGTCAAATACTACACTATCAAAGTCCCAACTAAAACAA TCGACCCTAAAACGAAACAAATGAttgcaaagaaaaaagataaagctACA ATCGTTGTTAAGGTTATTACAGATCACAATGAAAGAATCGAGGCAGAAAA TCAGGAAATGAAGACCATCATGGAAATCAGTGCTACGTTTGCTTGTTTCT TAACAAGTTGCTCCCTGGCATGTCATAATGATGGTGTCAAAGATCACTTG GATTACCTCATTGATGAGAAAACCAAACtgggagaaaaagaaaaagtcaa agaattgatcaaaatgaaaaaggagTACGAAACGCAAAAGGAGATCATAG AAAAAGCCATTAAATCGTCTACTATGCAGAAAACTAAATACGATATTGAT GTTGAAGGTGCGGCAAAACTTAAAGCACAGCTTTTTCAATTAAAATACAA TGGTCAAACCTTCAAAAAGATGAGTGAAGATATAGCAAGGGTCGAAGCTG ATTATAATTACAAGGAAGTTACATACATCACCAGCACCAAGGCTAAGCGT CTAAAAGGGAAACAAAATAATTCACATTATTTGCACCAAAACAACACAGC CCAAGGAGTATCTTATAATCACTCTCCACCTCCTCCTTATAATCATCATT ATGGATACCCTGAACAAAGATCACAATACAATCAACCAGGGATGAACCGG ATGAACCGTAGGAATAACAACCGACAAGTGGAAAACCAAGaggaaaactt tttcaaaaggatCACATATTTTGTTTTCGGCCAATGAGAACAAAAAGGTA AACttgtttctttttgtatttttacacccttttttataagaatggccaaa aaattaagaatatgctaagaatatcacgaTCATAAAATTTGGTAATATAA CGTAATAATACCATTTTTATAGCATTCTCAACTGTAAATTTCCAATTATC CCTCAAAAAAGCTCAATACTTTCAC

Coding sequence (CDS) from alignment at scaffold_100:402444..408568+

>TCONS_00045674 ID=TCONS_00045674|Name=TCONS_00045674|organism=Clytia hemisphaerica|type=CDS|length=5322bp|location=Sequence derived from alignment at scaffold_100:402444..408568+ (Clytia hemisphaerica)
CCCTCAATTCAAGCTTTTTACAGTGATACCTGCGCTGAAGTGAAGTTTGT
TGTCGAAATTATACAATCATTCGCTAAATTGAACGTGACAGTATTTGGGA
GACAACAACCGATGCTTGACTTAGATGGGACCAACATTGTTCTTTACTTA
CCCAAAAGAATAAATAGATCACAAGAGCTGACAGACAATTTGAGCTTCTT
TCAGCGTAAGGTCAAGGATATTTCGGATGACAATGACACTGAAATTAAAT
ATGCTGTGCAGCTGACATCGTTTCATCCAGTTACTTTTGAATGTCCAGTT
ATACAAAAGTTAAAAGACAGAAGAACAATTGTGAATGATCTTCTTAGCAA
GGAAGGAAGCCTTCTCAAACTGTGCACCGTTCATGTGGAGAGACCAAAAA
TATTACCTGAAACCAGTTCTGATGTTACTGATGAGAAGTTTGAGCTGAAA
ATCAGTTGTCCACTCTCTCATACGGAGGAATGTCCCAGAGAAAAAGTGTC
TTGGATCCACGATGAATGCAAGAAAATTATTAAGTACCAGGTCCTTTGGA
AACGTCTCAAATGTGATTGTGGCACGTTTGATCCACGAGATGCAACATTC
AGATGCAGTGACCCCAACCATGGAATAAAGTATTGCCAACCTAACGAGCA
TTCCTTTGAAGAAATGTCGAAGCTAAAGAAAAAGATCACGAATATATTAA
TCGTAGGAGAAACTGGTGTGGGGAAATCGACTTGGATCAATTCGATCGCC
AAGTACCTTCTGTATGATACTTTGGAAGAGGCGATGAAGTTGAATGAAAA
CACTGCTATCATTCCATCACACTTTTCACATACCAATGAAGAAGGTGAAA
CAGTTGATGTTAAGATCGGGGACTTCAAAGGGTATGATAATGAGGACACA
ACGGCATCGTCAACTCAGAAACCAACTTCGTATCTCTTTGACATTGACGA
CGAAAACCAAGTGAAGCTGATTGATACACCAGGTATCGGAGATACTCGTG
GGATCAAAAAggataatgaaaattttgatatgattCTCCATCATATGTCA
TACTTTACCGAAATAAATGGTATTTGCATTTTACTGAAACCAAATACTGC
AAGACTTGGAATAATGCTGAGGTTTTGTATCGGAGAATTATTGACCCATC
TTCATAAATCTGCTGCTCATAACATTATGTTCTGTTTCACAAACTGTCGT
GGAACATTTTATCAGCCTGGAGAAACACTTCCTGTACTAAAGAAAATGTT
GGAAAACTACAAGGAAAGCAACGTCAGAATCACCAAAGAAAATCGTTTTT
GTTTCGACAACGAATCGTTTAGATTACTTGCCTGCCTCCAAAATGGTATC
AAATTTAGTCCAGAGGATATAAAGGCCTACTCAGCAAGTTGGCAAAGAGC
TGCATCTGAAACACATAAGTTGTTTCAATATGTTTTCAAACTCAAGCCAC
ATAAAACAGATGAAACTTTGAGCTTGAACGACACACGCAAATGGATTGTT
GAATTGAGCAGACCGATAGCTGAGATCCAAGAATCGATCCAAGACCGAAT
TGTGCAAGTGgaaaacaagaagaaggagctggaAGATATGAAAGACGGTG
CTAAAGATTTTGATGAGCTTGAAAGATTAAGTGAAATCACTGTCTGGACT
CCGAAAGTTGTCAATTTAGATTACCCCAGAACAATATGTCGTCATAGAAA
TTGTACTGAAGCTATAAAGGTCCATGGAGCTGAAATATTGCAAACTCCAA
AGCCGTGCCATGATCACTGTTATATTGACAGTGTGACGCCTGGAAGACCA
GGTGATCCTGAGCTCCGTCATTGCATATGCTTCATCGACAAGCTGACATG
TAACGTATGCGGTCATCATAGAGGAGAGCATCAACATGTCAAATACTACA
CTATCAAAGTCCCAACTAAAACAATCGACCCTAAAACGAAACAAATGAtt
gcaaagaaaaaagataaagctACAATCGTTGTTAAGGTTATTACAGATCA
CAATGAAAGAATCGAGGCAGAAAATCAGGAAATGAAGACCATCATGGAAA
TCAGTGCTACGTTTGCTTGTTTCTTAACAAGTTGCTCCCTGGCATGTCAT
AATGATGGTGTCAAAGATCACTTGGATTACCTCATTGATGAGAAAACCAA
ACtgggagaaaaagaaaaagtcaaagaattgatcaaaatgaaaaaggagT
ACGAAACGCAAAAGGAGATCATAGAAAAAGCCATTAAATCGTCTACTATG
CAGAAAACTAAATACGATATTGATGTTGAAGGTGCGGCAAAACTTAAAGC
ACAGCTTTTTCAATTAAAATACAATGGTCAAACCTTCAAAAAGATGAGTG
AAGATATAGCAAGGGTCGAAGCTGATTATAATTACAAGGAAGTTACATAC
ATCACCAGCACCAAGGCTAAGCGTCTAAAAGGGAAACAAAATAATTCACA
TTATTTGCACCAAAACAACACAGCCCAAGGAGTATCTTATAATCACTCTC
CACCTCCTCCTTATAATCATCATTATGGATACCCTGAACAAAGATCACAA
TACAATCAACCAGGGATGAACCGGATGAACCGTAGGAATAACAACCGACA
AGTGGAAAACCAAGaggaaaactttttcaaaaggatCACATATTTTGTTT
TCGGCCAATGACCCTCAATTCAAGCTTTTTACAGTGATACCTGCGCTGAA
GTGAAGTTTGTTGTCGAAATTATACAATCATTCGCTAAATTGAACGTGAC
AGTATTTGGGAGACAACAACCGATGCTTGACTTAGATGGGACCAACATTG
TTCTTTACTTACCCAAAAGAATAAATAGATCACAAGAGCTGACAGACAAT
TTGAGCTTCTTTCAGCGTAAGGTCAAGGATATTTCGGATGACAATGACAC
TGAAATTAAATATGCTGTGCAGCTGACATCGTTTCATCCAGTTACTTTTG
AATGTCCAGTTATACAAAAGTTAAAAGACAGAAGAACAATTGTGAATGAT
CTTCTTAGCAAGGAAGGAAGCCTTCTCAAACTGTGCACCGTTCATGTGGA
GAGACCAAAAATATTACCTGAAACCAGTTCTGATGTTACTGATGAGAAGT
TTGAGCTGAAAATCAGTTGTCCACTCTCTCATACGGAGGAATGTCCCAGA
GAAAAAGTGTCTTGGATCCACGATGAATGCAAGAAAATTATTAAGTACCA
GGTCCTTTGGAAACGTCTCAAATGTGATTGTGGCACGTTTGATCCACGAG
ATGCAACATTCAGATGCAGTGACCCCAACCATGGAATAAAGTATTGCCAA
CCTAACGAGCATTCCTTTGAAGAAATGTCGAAGCTAAAGAAAAAGATCAC
GAATATATTAATCGTAGGAGAAACTGGTGTGGGGAAATCGACTTGGATCA
ATTCGATCGCCAAGTACCTTCTGTATGATACTTTGGAAGAGGCGATGAAG
TTGAATGAAAACACTGCTATCATTCCATCACACTTTTCACATACCAATGA
AGAAGGTGAAACAGTTGATGTTAAGATCGGGGACTTCAAAGGGTATGATA
ATGAGGACACAACGGCATCGTCAACTCAGAAACCAACTTCGTATCTCTTT
GACATTGACGACGAAAACCAAGTGAAGCTGATTGATACACCAGGTATCGG
AGATACTCGTGGGATCAAAAAggataatgaaaattttgatatgattCTCC
ATCATATGTCATACTTTACCGAAATAAATGGTATTTGCATTTTACTGAAA
CCAAATACTGCAAGACTTGGAATAATGCTGAGGTTTTGTATCGGAGAATT
ATTGACCCATCTTCATAAATCTGCTGCTCATAACATTATGTTCTGTTTCA
CAAACTGTCGTGGAACATTTTATCAGCCTGGAGAAACACTTCCTGTACTA
AAGAAAATGTTGGAAAACTACAAGGAAAGCAACGTCAGAATCACCAAAGA
AAATCGTTTTTGTTTCGACAACGAATCGTTTAGATTACTTGCCTGCCTCC
AAAATGGTATCAAATTTAGTCCAGAGGATATAAAGGCCTACTCAGCAAGT
TGGCAAAGAGCTGCATCTGAAACACATAAGTTGTTTCAATATGTTTTCAA
ACTCAAGCCACATAAAACAGATGAAACTTTGAGCTTGAACGACACACGCA
AATGGATTGTTGAATTGAGCAGACCGATAGCTGAGATCCAAGAATCGATC
CAAGACCGAATTGTGCAAGTGgaaaacaagaagaaggagctggaAGATAT
GAAAGACGGTGCTAAAGATTTTGATGAGCTTGAAAGATTAAGTGAAATCA
CTGTCTGGACTCCGAAAGTTGTCAATTTAGATTACCCCAGAACAATATGT
CGTCATAGAAATTGTACTGAAGCTATAAAGGTCCATGGAGCTGAAATATT
GCAAACTCCAAAGCCGTGCCATGATCACTGTTATATTGACAGTGTGACGC
CTGGAAGACCAGGTGATCCTGAGCTCCGTCATTGCATATGCTTCATCGAC
AAGCTGACATGTAACGTATGCGGTCATCATAGAGGAGAGCATCAACATGT
CAAATACTACACTATCAAAGTCCCAACTAAAACAATCGACCCTAAAACGA
AACAAATGAttgcaaagaaaaaagataaagctACAATCGTTGTTAAGGTT
ATTACAGATCACAATGAAAGAATCGAGGCAGAAAATCAGGAAATGAAGAC
CATCATGGAAATCAGTGCTACGTTTGCTTGTTTCTTAACAAGTTGCTCCC
TGGCATGTCATAATGATGGTGTCAAAGATCACTTGGATTACCTCATTGAT
GAGAAAACCAAACtgggagaaaaagaaaaagtcaaagaattgatcaaaat
gaaaaaggagTACGAAACGCAAAAGGAGATCATAGAAAAAGCCATTAAAT
CGTCTACTATGCAGAAAACTAAATACGATATTGATGTTGAAGGTGCGGCA
AAACTTAAAGCACAGCTTTTTCAATTAAAATACAATGGTCAAACCTTCAA
AAAGATGAGTGAAGATATAGCAAGGGTCGAAGCTGATTATAATTACAAGG
AAGTTACATACATCACCAGCACCAAGGCTAAGCGTCTAAAAGGGAAACAA
AATAATTCACATTATTTGCACCAAAACAACACAGCCCAAGGAGTATCTTA
TAATCACTCTCCACCTCCTCCTTATAATCATCATTATGGATACCCTGAAC
AAAGATCACAATACAATCAACCAGGGATGAACCGGATGAACCGTAGGAAT
AACAACCGACAAGTGGAAAACCAAGaggaaaactttttcaaaaggatCAC
ATATTTTGTTTTCGGCCAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029198XLOC_029198Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045674-proteinTCONS_00045674-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045674-exon-scaffold_100-1491911889:402444..404164TCONS_00045674-exon-scaffold_100-1491911889:402444..404164Clytia hemisphaericaexon
TCONS_00045674-exon-scaffold_100-1510915933:402444..404164TCONS_00045674-exon-scaffold_100-1510915933:402444..404164Clytia hemisphaericaexon
TCONS_00045674-exon-scaffold_100-1575043694:402444..404164TCONS_00045674-exon-scaffold_100-1575043694:402444..404164Clytia hemisphaericaexon
TCONS_00045674-exon-scaffold_100-1491911889:407439..408568TCONS_00045674-exon-scaffold_100-1491911889:407439..408568Clytia hemisphaericaexon
TCONS_00045674-exon-scaffold_100-1510915933:407439..408568TCONS_00045674-exon-scaffold_100-1510915933:407439..408568Clytia hemisphaericaexon
TCONS_00045674-exon-scaffold_100-1575043694:407439..408568TCONS_00045674-exon-scaffold_100-1575043694:407439..408568Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:402444..408568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0335127 0.0654739 0.118113 0.0447083 0.0181089 0 0 0.0342296 0.0772472 0.0325363 0.396677 0.0188341 13.4334 11.902 104.11 105.051 18.3012 15.2302 51.3836 50.5692 1.67037 1.35519 4.3621 5.09853 0.0587289 0 1.70611 3.20701 38.0837 41.3131
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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