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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000029:621439..629542- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00047837 ID=BlTCONS00047837|Name=BlTCONS00047837|organism=Branchiostoma lanceolatum|type=mRNA|length=8104bp|location=Sequence derived from alignment at Sc0000029:621439..629542- (Branchiostoma lanceolatum)
AATGTTGAGACAGCTTTGCACGCGAAAACAGCTTAATTCCGCTAAGTGCG
TTCCTTAAGACTGTTGCAAAGGACGTAAAGTGGTTAGTTACTGACTGCTT
GAAGGAACGTGGCGCTTTCTTGGCGCTTTCTTCCATTTGGCAAGACCCGA
TCGCAAGATGGAAGAGAAGACCGCAAGTATACTTGGAACTCTACGAGAGT
ATGGAGAAACCACCTCGGCGCATGGCATCCCTCGCGCCGTCACCACCAAG
TCGGTACCCCGGCGACTGTTCTGGACGTGCCTGTTCCTCGCTTCCTTCAG
TTACTTCTGCTGCCAAGCCTACGACCTCGTGAATAAGTACATAGACTACC
CCGTCACTACGGACATAAAGATCCAGTGGTCAGAGCTTGAGTTCCCCGCT
GTTACGATCTGTAACGCCAACCCTCTTCGGTTTTCCAAGCTTCTACGACT
CGGGCATGAAGGTTTCCAGAACGCTGGTTTTATACCAAGACCTGCCAAAA
CTTCACAGGGCAATCAGGGCAAAGCACAAGGTGGACCATTCCAACAAGCA
CAGACTACTACAGTGCCGAGTCCGACGACTACAGCAACGACAGAGGCGAC
GACGCCCGACTACGACTCGGTAAGGAAATGTTTTAACGTTTAAGAGCTCA
CACAAAAATAGCATGCGAAAATAACAAGGGTAACGGATATAGAGTTAAAC
CTGGATTCAGCAACCTCTCAATGGACAGAGGAAAATGGCTGATGAGGACA
GTTGGTTTTTCAGTACAGGGTTGGGGAAACTAATAGTATGTAAAAATGGA
CGGAACTATCTTAATGTTGTTTGTGACTGGAGGTGGTTACCTTTGCCAGG
TGGTTGCCCCACAAGGTTTTACTATGTAGAGAAAAGTGCAGATTAAGTTG
CAGATATACATGTACCACCCGATATCAGCTTTGAGACCGTTTCTCTGAAT
TGTATTTAACAGCTTGTCACACATAATCCTTGCATTGTCTGAAGTTGTAT
ATATATACATTTATCATAAAATCTACCGCCAAACTATAAAAGGCGTAGGA
AATGTTGGATTTCTTTATAGCTAGGTTAAGAACAGACGCGCATAGCCAGT
ATTATCACAGTTAATCGCAACGTATGATACATCTAAAACTGTGTTGAAAC
CCTGACAAAACGAAATCCATGATTTTCGGATCACCCCAGAAACTGCGCCA
CGCAGGAAAGAACATCGATATCACTGTAACTGATGGGTTTAACTCTTTTG
AGCAGGTAAATGTATTTACCTACCTAGCTGTACAGAAGGCAATTCGAATT
CGCCACAATGCACCAGCCTACATGACTAAAATGTTTAAATGGCTATCACC
CCCAGTGCTCAGACACGCACTGCCACGAAGCAGCTCTATAGCTACGACCC
TCACATACTGGACTGGCACCCCTGAAGCCCCCCTCTCACTGGACCCGCGG
CACGCTGGCGGCGTCGCTGCGCCCTAAACTGGACTTGTGTTACCCTTGAC
TTTGTAATGGGAATATCATTCAAAAAGTACAAGTATGACCAAAAAGACAA
CAGAACACACAAAGCTTTAAAAGATTCGTTTTTTTGTCGATGAAATTCGT
TGAGTGCTTTGTCAATTCGATCGGCCGCAGCGACGCCGTCAGCGTGCCGC
GGGTCCAGTGAGAGGGGGGCTTAAGGCAAACATAGAAACCTTCAAGGGGA
GCCTGCAGTACCAAGGGCCACTACTGTGGAACAATCTCACTGAGGACCAA
CGGCACATTGCAACAACATCAGCGTTTAGAAATAGACTGTAGCGGAACTG
TAACTAAACTGATTGGGATAAGTTGGAATACTGTAATATATGTATGTACA
TGTAACGTTATCTGCATATCTGTATATACCTGTGTGTTTTTTCCATGATT
GTATTTTTTAATGTTTGAGCCCAGGGTCATCTGAAAAGCAGATCCATGGA
TCTGAGATGGACCCTGGTAAAATAAAATAAATTGAAATTAAATTGAAATT
GTATAGTTCTTGCAGGTTGTATGTTTTGTGACTAGTCATTTAGTCCAAAT
AAGTTGACATCTTTTGGGGTCTGATTTAACACTTAACAACACCTGTAATA
TGTCCTATCCTCACCGACTGAAACATAGGCTTATGTTAGTCACAAAACCT
TTACAGTGTTCACCACCCAAAACGTTACAAGTCACAGACTGTTGCCATTT
CTTAAGTCATGCCTTGCGACGTTTAAGTAATAACGTTAACTGTTATTTCA
CAACGGTGATTTCTGAATATACAAGTGGCTTGATTTCTGAATATACAAGT
GGCTTCAAAGCTTTGTTGGGATTAACCCCCTGATCCGGTATTTTCGTCAA
CAGGTCAAGTTTTACGCAGTGTTTTCATCATATGTGTTTAAAATGGTTGA
GGGACAGATAGTAACTTCAGTGTACTTGTATGCAAATAGGGGTTCCTGCG
TACTATACAGAAAGGCGTGAGAAGCACTTAAATGTCGTCTTTTTACATCC
GATTAGTCCTATTGAAAGAAAAAGGAAAACTTAATTTTCCATGACGGTGG
CAGCACACCGTGTAACCGCGTCATCAGCGATCAGAGACGCTAGAAATGAT
TCAAGAAGACGCTAGAAATGATTCAAGAAGACGCTAGAAATGATTTAAGA
AGACGCTAGAAATGATTCAAGAAGACGCTAGAAATGATTTAAGAAGACGC
TAGAAATGATTCAAGAAGACGCTAGAAATGATTGAAGAGTACGCTATGAA
TGATTTAAGAAGACGCTAGAAATACATATTTTCTTCATATGTTGAGTCTT
ATTATATGACGGCACCTCCTGTGTGTTTGAAAATGAGACATCTTAATTTT
TTTTAATCTAAACTTTATAATCCAGCAATGTACATGCTTTGTTTATGTTG
TAAGTATGTGGATACATACAGACGTTAACTATGAAATCATGAAACTTTTA
TCCGTTTAGAGATCAAGTCGGCTGTAGGTTGTAATTAATTAATATCAAAT
ACCCTCTCTAAGCAATATACACATGTCCCGAAATAACTGTTGAGGGCACG
TGTAACAAGAATAGTCACTGTACCTTACTACTGTGCCCAGCGTTCTCGCT
GGTTAGAGAACAAGAATAGCTAAGGTGTACAAGGACGGGGGGTGATACAA
ACTTCCGCCAGCTACCTGTCCATCTAAAATCAAGGAAATTTCGCTCCCTT
TCCAGGAAGATGACGATGATTACGACTATGACTACGACGATCACCATGAG
GATTTTAAGACAGCCAATACCTTCATGGGACTCATCGCCAACTTGAACAG
CTCTACTCGACAGGCCATTGGTCATCAAGCACGTGACTTCATTCAAGAAT
GTCAGTTCGATGGGAGGGCGTGCTCGCCGAAGTAAGCTTGTGGACCAATC
AGCTACTTTGTCGTGCAGTTTTACATGGTTCTATGTGAAGTCAGATGTGT
TAAATGCAATTTTGTAAGCAATTTGTTTCATCAAAAACTACTGGTGCAAA
TTCATATTACTAGTTTTTTTTTCGTCATGATTCTTTTTCAGCCTTTCTCT
GAAATTAACTTGACAATGATGATACATCATGAATATCAAATAATAAGTGT
TTCTGGGTTATAATTTCAGGAATTTCTCCATATTTACGGATAGCACCTAC
GGAAACTGTTTCACCTTCAATAAGGCCAGCGGCAACACAGCGCCACAGAG
TGCCACAAGTGCAGGACCTTTAAACGGTACTCCGGATGTTTACACTCTTA
AAGGCACCCAGAGCATTTTATGAGGCTTGAAAACTGGAAATATTCTAATT
GCTGTAATCTTTATGAAATTGACATCTAATGCCACTGTTTACCACATTTG
CGTGCGGATTTCTTATCAAAAGTGCTAAAAAGCGGCACAAAAATAAGCTA
CATGGTGATCTTTTAGTTTCACGCGCCTAGTGTAAATAGACCGATACCAT
AGCCCCGCCCACCTCCGTCAAAACGTAGAAATGCAAAATTAAAACATAAA
AATGCAAATATTTGACGAGCATGCAGTCACTCTCTCATTGGGTAGGATAG
TCAGGATCAGTCTATTAGGGCTTGGAGTTTCTATTAGTTCTCACCACACA
ACGACAACGTATCTTTGCTCCTTTATTGTCGATATGTAATGATATAGTGT
TATTGAAACCTACCACGTGTAGGAATGAATAGACATTGGAGTTTTTCTAA
TTCAAGTTTCAAGCCTTATAAAATGCTCTGGATGCCTTTCATAACTTTAC
GTACATTGCATCTTTGTACCAAGGGAAATTGGCCCTGTCTTACCATGATG
AAAAATCTTTTCAGATATCTGCGTTCAAATTTCGAATCCAAATCTTAATA
AGATTTGTTCAACGCTAACTTCTAAACAAGTTAAATGAAAGTTAGGTCAA
AAATGTTCTCGTTTTGTTGACAAACTGTACAGCCAAAAGACGTCAGTAGA
AACCTAACCTCATTGGTAAAGGTAAACATAAGGCTGATTCAATTATGCAA
ATGACGATGGGAAGGTAAGGGAGGTCAATGCTCCATATAAACACAATTGG
TGGTGGCCCATTTTACCCTTCAACTCAATTAGTCGACAGTGGTCGCCACT
TAGTTGTCAACCACAAGTAATTTTTTCTTTAGTGAAAGAAATTAAATCTC
TACAACATTTCTTTCAAGAAAACGTACAAAGGACCATATCAAGGCTCGTA
GTTCACAAAATCTGTGATGAAGGCTTGAATGGGGTAGGATAAATTATTAT
TACAGAGGCTTACTAAGTCCATTAATCTTTTAGGCAGTTGAAAGGTCTAT
GATCTGGTCGGATATGTCATTGTGTCTGAACAAGAGAGAACACGTAGCAA
ACCTTGGGGGATGATAATGTTTTAGTTAATAATATCTACTTACTGTCTTT
AGAATAGTTTCTTCTCGTTTGTGGCTCGGGTAGTCCACCACGTTTGTTTT
TAATGCTTCGTATATAGTTAAACTTGTTTCATGTCATTTCAGGCCTTTCC
CTGATCCTGTACATAGAACAGGAGGAGTACATCCCCTCTCTGACAGAGAA
GGCAGGTGTGCGTGTAGTTGTGCACTCCCCCGCTAGGTGGCCCTTCCCAG
AGTTCGAAGGATTTGACGCAGCCCCGGGTTTTCTGACCTCGGCTGGACTC
AGACTGGTACCTTTTCAACACTTCAATTCTTCCGTTAAATTTGATATAAA
ACATATATAGCACAAAGCGATGATAGAAATACTTAATCCGATTATTTTCA
AATCATTGGTTATAGTCCACTCAAATAATGATCTTATAATGCACAGTAGG
TAGTCACGTGATCACAGAAAGCCTGTAACGCCCACCGTCCGCCTTCCTTT
AATGCGATTGTGAACTATTTTCATACATTGCAGACGTCTATCACTCGCCT
TGGAGGACGGTATGGTGACTGTACAAATGGAGGTGGATATGAACTTCTGT
ACCCGGGGACCTACACCCAGACGGTAAGTATCGTAAGGCTGGTTAGTTCA
CGGGTAGTTTTTGGCACTTTCGAGCGTGACCCCTAAGTGTCCCCATGGGG
CACGCTGCGACTGCCAGGCTATTTTTAGACCAGGCCGGGACCCAGAATCA
TTTTAACCCGGACTTAAAGTCAACGCGGGACCCGGTAACAAATAGACGCC
GTGAGCTAATCGTTTCTGAACATATTGACCATTTCGCTTCCAGAACTGCC
TTGTCACGTGCCACCAGCGGCACATGGTCAGTGTGTGCGGCTGCGCAGAC
CCTAGTCTGAGGGCACCGGGCAACACGACCTTTTGCGACAGTACCACCAC
ATCTGGTCAGTCATATACATGTTGTTCTTTTCACACATGGTGTAATATAA
CGTAACACCAGATTTCCATATATTAGAGTGTAAGGCAATCATACAATACA
TCTATACCGGTGATTATGACAGTTTTCACCGTCAAGAATAATTTAATCAC
GTATCTCTGATCATTAAAACATTCACACAGCTGTGTCTGTCCTTGGTGCT
GAACAACATCACTTCACTTGTCTATGATGTCAAACAGTCACACTGCAGCC
ACGTGAATTGAATGTTTTGTTGTTCTAGTGGACTGTAAAAACAGAGTGAG
GCGGGAAATCGTGACAGGCGTGCTGGCGTGTACGTGTCCAGCAAGCTGCT
CGTAAGTGGTCGAACTTTCAATCGATCATCAACAGACTTAAGAATCATGA
TGTCATGGATTGAATTTAAAACATCTGAATTATGTTTACGTCAAGAGAAA
AACTTTTCCTACCGTGCACTGCATTATCATGAACACGTTGTACCGCCAGA
ACAATGTTTTTATGAATGATTGATGTAAGTTAGCATATAAAAAGCATAAT
AACTACACAAACATGACTTTCAGATCATGAATCGAACATAAACAGGATGC
TCCCAGTTGTTTTTGTTTCTTTACACAGGGACAAGGTGTACGGAAAGGCG
ATAGGGCTGTCGGAGTGGCCTGCTGACTCCTACTTAGTAAGTATATCATT
CATGTATGAATAACGTAAAGAATTTGATTCACAATGATATGTATAGTACA
CCAAATGATTAGGTGATGATAGTGCTGATGGTGTAGCTGATGATGATGAT
GACGTAGCTCATGAAGATGATAATGCTTACGATGATGTAGCTCATGAAGA
TGATAATGTAGCTGCTTATGGTGATGATGATGACGATGATGTAACTGATG
ATAATGATGATGACGATGTAGCTGATGATGATGACGATGATGCAGCTGAT
GATGATGACGACGATGATGATGTAGATGATGATGATGATGATGATGATGA
TGATGATGATGATGCAGCTAATGATGATGACGACGATGACGACGATGATG
ATGATGATGTAGCTGATAATGATGATGTTGACGATGATAAAAGTTCTATA
CATCAACAGCACCAGAGGAAGCTACATGTACATTCATTTTGCATACAACT
TGTATCTCATTTGGTCATCCCTACCTGAGTTGTATACGATATAACTATGA
AATCCCTGTCATTTCAGACCAACGTACTTACCAAGCTTCAGACCAAAAAA
GGACGTCGTCCTGGAACGGCCATTTTGGGGGACACGGATCGGTTCAAGTA
AGTAGTATATGATGTGTACCATAACAACAATCTTGGCTTGATAACCGTTT
TAAACAGGCAGCTATGTCGTCGAGCAAGGGTAAATGTGGATTCTCCTAGA
AAACCACCGTATGCGTAAAGTCAAAGTAGCCAAAGTAAGAACGAAAGAAG
GGAATGTGTAAAATTATTGCTTTACCTTCAAGTTGACTACATTGTGGATG
CTACATTTGTAACTTTTATATTTACCATGGACAGACAAAAAATGGAATAA
ATATAACTGTGTGAAACTAATAACATCTATTCATTGTTTCCCATGCAGGA
GAAATCTGTTGAAACTGAACATCTACTATGAAGCCCTGAACTATGAAAAG
ATCAGTGAATCTCCCGGATATGAGGTAACAAAGATTATACTTAATTACGT
GTTTTACATCAAAGTCTTTTTTGACACATCTATAACATATTTCAATGACA
TGTATACAGTTTGGAACTTCAGTTTGGGATATTTACACCAAGACATCCAA
ACTCATTATCAAAACTTTAAAAAATCATGCAGGACCAAATATTGAGATTA
CATTTAACCAAGGCTGGGTTTGTTTACCAATCCGTTATTGGCTTCCCAGG
TTGATAGTTAACTGAGTGACCTGGGTGGTAAGCTGTGTTTTGAGGTCGGA
TTATATCCCCATACAAACAGTTGAAATCAACCCTGTCTTTTCACTTCCCC
AGGAGGAGGGTTTGCTGGGTGACCAGGTGGGTTTGTGGGTCAGACTATAT
CCCTCATACAAACAGTGAATATTAACTGTGTATTTCCAATGCCCCAGGAG
GAGAGATTACTAGGTGACCGGGGTGGCCAACTGGGTTTTTGGGTCGGGTC
CCTCATACATTATGACATTAACCCAGTCTTTTCCCACACTCAGGTGGAGA
CTTTACTGGGTGACTTGGGTGGTCAACTGGGTTTGTGGGTTGGACTATAT
CCCTCATACAGTCTTTTCACTTCCCAGGAGGAGAGTTTACTGGGTGACCT
GGGT Coding sequence (CDS) from alignment at Sc0000029:621439..629542- >BlTCONS00047837 ID=BlTCONS00047837|Name=BlTCONS00047837|organism=Branchiostoma lanceolatum|type=CDS|length=1425bp|location=Sequence derived from alignment at Sc0000029:621439..629542- (Branchiostoma lanceolatum)
ATGGAAGAGAAGACCGCAAGTATACTTGGAACTCTACGAGAGTATGGAGA
AACCACCTCGGCGCATGGCATCCCTCGCGCCGTCACCACCAAGTCGGTAC
CCCGGCGACTGTTCTGGACGTGCCTGTTCCTCGCTTCCTTCAGTTACTTC
TGCTGCCAAGCCTACGACCTCGTGAATAAGTACATAGACTACCCCGTCAC
TACGGACATAAAGATCCAGTGGTCAGAGCTTGAGTTCCCCGCTGTTACGA
TCTGTAACGCCAACCCTCTTCGGTTTTCCAAGCTTCTACGACTCGGGCAT
GAAGGTTTCCAGAACGCTGGTTTTATACCAAGACCTGCCAAAACTTCACA
GGGCAATCAGGGCAAAGCACAAGGTGGACCATTCCAACAAGCACAGACTA
CTACAGTGCCGAGTCCGACGACTACAGCAACGACAGAGGCGACGACGCCC
GACTACGACTCGGAAGATGACGATGATTACGACTATGACTACGACGATCA
CCATGAGGATTTTAAGACAGCCAATACCTTCATGGGACTCATCGCCAACT
TGAACAGCTCTACTCGACAGGCCATTGGTCATCAAGCACGTGACTTCATT
CAAGAATGTCAGTTCGATGGGAGGGCGTGCTCGCCGAAGAATTTCTCCAT
ATTTACGGATAGCACCTACGGAAACTGTTTCACCTTCAATAAGGCCAGCG
GCAACACAGCGCCACAGAGTGCCACAAGTGCAGGACCTTTAAACGGCCTT
TCCCTGATCCTGTACATAGAACAGGAGGAGTACATCCCCTCTCTGACAGA
GAAGGCAGGTGTGCGTGTAGTTGTGCACTCCCCCGCTAGGTGGCCCTTCC
CAGAGTTCGAAGGATTTGACGCAGCCCCGGGTTTTCTGACCTCGGCTGGA
CTCAGACTGACGTCTATCACTCGCCTTGGAGGACGGTATGGTGACTGTAC
AAATGGAGGTGGATATGAACTTCTGTACCCGGGGACCTACACCCAGACGA
ACTGCCTTGTCACGTGCCACCAGCGGCACATGGTCAGTGTGTGCGGCTGC
GCAGACCCTAGTCTGAGGGCACCGGGCAACACGACCTTTTGCGACAGTAC
CACCACATCTGTGGACTGTAAAAACAGAGTGAGGCGGGAAATCGTGACAG
GCGTGCTGGCGTGTACGTGTCCAGCAAGCTGCTCGGACAAGGTGTACGGA
AAGGCGATAGGGCTGTCGGAGTGGCCTGCTGACTCCTACTTAACCAACGT
ACTTACCAAGCTTCAGACCAAAAAAGGACGTCGTCCTGGAACGGCCATTT
TGGGGGACACGGATCGGTTCAAGAGAAATCTGTTGAAACTGAACATCTAC
TATGAAGCCCTGAACTATGAAAAGATCAGTGAATCTCCCGGATATGAGGA
GGAGAGTTTACTGGGTGACCTGGGT
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00047837-exon-Sc0000029-1564993656:628924..629542 | BlTCONS00047837-exon-Sc0000029-1564993656:628924..629542 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:626162..626337 | BlTCONS00047837-exon-Sc0000029-1564993656:626162..626337 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:625817..625923 | BlTCONS00047837-exon-Sc0000029-1564993656:625817..625923 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:624387..624550 | BlTCONS00047837-exon-Sc0000029-1564993656:624387..624550 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:624070..624159 | BlTCONS00047837-exon-Sc0000029-1564993656:624070..624159 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:623738..623849 | BlTCONS00047837-exon-Sc0000029-1564993656:623738..623849 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:623392..623464 | BlTCONS00047837-exon-Sc0000029-1564993656:623392..623464 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:623057..623114 | BlTCONS00047837-exon-Sc0000029-1564993656:623057..623114 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:622446..622525 | BlTCONS00047837-exon-Sc0000029-1564993656:622446..622525 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:622069..622144 | BlTCONS00047837-exon-Sc0000029-1564993656:622069..622144 | Branchiostoma lanceolatum | exon |
| BlTCONS00047837-exon-Sc0000029-1564993656:621439..621465 | BlTCONS00047837-exon-Sc0000029-1564993656:621439..621465 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:621439..629542 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF023781 |
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