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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000025:2786979..2794343+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00044281 ID=BlTCONS00044281|Name=BlTCONS00044281|organism=Branchiostoma lanceolatum|type=mRNA|length=7365bp|location=Sequence derived from alignment at Sc0000025:2786979..2794343+ (Branchiostoma lanceolatum)
TGAGACTTCAAACGTTCTGACGGGTTCTGTAGCTCGTCTTGTTAGCCCTA
CCGTCTCTGACAGCGGACAGTATTGTCTCCAGTTCGCCTACCACATGTAT
GGGGCCGACATCGATCAACTACGTGTGCGGGTCGGGTCAAGTGTCGAATG
GATACGGTCCAACAACCAAGGAAACAGCTGGCATCAGGCCTCCGTGGACG
TCTACATATTCTACGACCAGGTTTGTAGTCAACAAGTATTATATTCTACG
TTCTTTCTTTTTAACAGTATGTCTTGCGTAAGATAAACATGAGCTCTTAA
CGTCCCTTATTTTTGTTGTGTCTAGATCGTTTTCGAAGGTTTTGGCGGTA
ACGGCTACAGAGGGGACATTGCCATTGACGACGTTGTCCTGTACCCTGGA
TCATGTCAGTGGACAGGTTGGTAATAGATCTCACACTCATTTTCAAGGTG
TAAGACATTCATTCTTGAGGACAGAAAGGTATTCCTAGTACATGAACCTC
ACTCTCAGTGCAAGAAACTCATTCTAGGTGTAAGAAATTCATTCTTGAGG
ACAGAAGAAATAAGAAAAAGTCAGTGAGGACGTAAACTTTTTCTTAGAAC
ATTTTTTCTCTGAATTTATATCTTAGATACAAATTCTGTACCACAGAAGA
GTTATAAAAACAAGAAAATTTATCTAGACGTTTCTAGTCACATATGTGTG
AGAAAAAACAGCTTGGTCAGAGAAAAATATTTGAAGAAAAAGGTATCGTC
CTCACTGACGTTTTCTTACTTTTTCTTTTTCCTGCACACAGAATAGTTTT
CTTTCTGGAAGAGAACTTTTCTTCAACAAAGAAAAAACAAGAATGACATT
TTTTGTAGTGTGTGTAGTTGCCGAGGCCTAAAACCGTCATATCTTGATTT
CGATTACCATGTTTCATATTGAAATAAGTATGTTGGTCATCTGACTCTTT
CCTAAAACCTGACATTATATTCACTTTTGTTCAACTCGTGGAAGTGACCA
CTTTAAACATTGTTAAACCAAATGCCTTTTGTACATTCAGAAAGTCCAAC
CACATACTTGACCGAAGAACCGACCACGCCTCCTGACATCGACACTTACG
TGTGGACCATGCCCTCGGACTACTATCACAGTTAATGCTATATGTTGATT
TATTGTGACGCTTATTTAACACAATGGCATATGATAGTTAAGGAAAGTCT
ACCATGACACAAGATTTGAATATAGTTTTATGACTAATTGGAAAGTTTTT
TGCAATGATTCAGGTGCCAGCCTGACGGGATAGCATTGTGTGCAGGCTGC
AAGAATCCCAGTAATTCGTTAGGCATGTACTTTTTGTGTCCACGAACAGA
ATAACTCTCATAACTCAATATCGATTGTCTTGATATACGTGGTAGGTCTT
GGTGAGACCTCAAATTGATTAGATTTTGGGCCCCTATCGGCTTGTTACGG
TACTTGCGGTGTTGATATGTCGTGTTTTGTACATGCCATGGTCGACATAG
ATAGCTCTTATTTATGATGGTTCTGTATTGGAATATCCTCTGCTCTACCT
TAACTTCACATGTAAACTTTATGTCAAATCAAACAGGCTTCCAGATCCGA
CTGAGTGGAGGTAACAACTACAGCTACGGTAGAGTGGAGGTCTACTACAA
CGGAGAGTGGGGGACTGTCTGTGACGACAGCTTCGACCAACACGTCGCCA
TAGTCGTCTGCGGTGAGCTGGGATTTGATCAGTTCGGCTCGCACTACTAC
GATAATGCGCACTACGGCTCGGGCAGCGGCCGGATATGGATGGACGATGT
CGACTGCACCGGGTTCGAGACTTCCCTGCAGTTCTGCCAACATCGCGGTT
GGGGGAGCCACAACTGCGGACATGAGAAAGACGCCTCGGTTTTCTGCAGT
CTCCAATCGAACCAATCAGGTGAGTATCGCACAACTTACATGACAATTGA
CACATACTTTACATCTTCGTGAATTGACAGACCAACACACTTTACACGAA
CACACTTAAAATAACAAATGTGAAATCTATTGTGTTCTTTAGAGCCAAGA
ACTACTGAGAGGCCACGCCGGTGGTGGTGGGCAACTACTGATGGTTTGAA
AACAGTATCTGGTTTGTGGCAAATTATCTGATTTGTTGAAATATCCTCAG
TTTTAATGAATAGGTCTAATTTTGAGCTTATTAGCTGGTGGATATTGGTA
AGTGCATTGGAGTAAAGTATTTACTTACATCTCATCCTGTAGAGCATATG
ATAAGGCTGGGGTTAAAAACTCTTCATATTTCACAAAGATATGCGAGTCT
TCTATTAACGACATGTCTATACTATGCATGATGTACAAAATCACTAATAA
ACTGGTGGACGTACCGACTAATAAGTATCTAATACCAGCTCAGAAAAGGA
CAAGAAATAGCCATGCCTTTAAGTATCAGACTTTTAAACCTACGATTCAT
GTGTTCAAAAATTCGTATTTTCCTAGAACGATCGTAGAGTGGAACTCGTT
GCAACCAAGTACCGTTGAAGCATCCTCATTAGACAGCTTTAAACAATGCA
TGTAGTTAGATATGCGAAGGTTAGACGTGACAGGTGTAATATAACCAGCT
GCTGCTGCGCCGCGTGCCTGCGAAGTTGGTGTGTTACGCCGAATGGTGGT
TATACCGGGTATATAGACACAGATACAGATCTTATGTTCACTGAGTCATT
GCTATGCGTTCATCTCAGACAGGAAACCGTGTGGGGACTTTCCATGGGAT
ACCGATGACGTCACAGTGTACTGCGACTACGATTGGCTTGATGCATTGGA
GAATTTTTGGGTGCGAGGATACTGCAATGTCAGCTGCCCCTCGGGAGCCG
ACATGTTGACTGGACCTCCCGATGATGACTACACGCGCAACAGTGCATTC
TTACCGCACGGGAGCTACTACTGTGATTATAGGTCATGGCAGGGAACAGA
ACCCGTGTGCCTGGGTATGACTTTTGTCCATCATCTTTCTTTGACTTATG
AAGACCCTTTGACACAACCAATGGTCGCAAATCTGACAGGATATCAAATA
TCAGTTGGCCGATTCTCAGTTCACTCTCGTGCCGATAAGCTCTCGCGAGA
TTCAGGAAAACGACTTGATTAACTTCGCCGAGGAGGTTAATATGTTTTCG
CCAGATCAGAGTTCGTGTGTGTGTCCGTCTGTAAACACGATACCTCGAGA
TTGCCTAGATGGATTGTCTTGATACTTGTTGTTGCTGAACTAGTTGGCCA
TTGCTGTAATGGGGCCTACTATAGGGGCGGGGACTATTCCACTTACATTA
TCGCCATAGCCATTTGATCGGAAAATGTTTGAATGAAAGCAGAAACTTTT
CTTTCTGTCAATGCCTTTTCTTGTACGGTACAGGTCAGTACAACAACGCT
ACCTTGGTAACGGACGAGCCCAACGGAATCCGGCTGGTGGGGGGAGAGTT
CTACGGCTGCGTGGAGATGTACGATGAGGTGACGGAACAGTGGGGGCCTG
TGCGAGGGCGAGCGATGAAATGGTCGGACGTGGCATGTAAAACCCTGGGG
TTTCACGGAGTACGTGCTACCGACGGCTACCGTTTAAGCAATGGTAGCAT
TAGAGACAGTATCATTTCTCTGTCGTCGCATTACCGACCGGCCTATCCTT
CCACAAGCCCGAAGTTTCTCATGATTCCTGGATACGATCCTCCAGAAAAC
GGCCCGGTAATGTTACATGACGCCATTGGACGTGTGGAGCGAGCATGCGT
GCCCGGCCAGTGTTCTCTTTTCTAAGCCTACACCTTTTGCTTGGCTTGTG
CGGGAGAGCGGAGACGTGATATTGCACAAGGTACGATTATTTGAAAATTC
CGTCATAACAGTTTCGTTTGACCAAGTCCTATTTTGATCTCCTTGGTTTG
ACTGTTCCTCGTAAAACTTAGTCACCTTACGACTGCGCATGTGCAGTTGT
GATGCAAGTTAGTGTCTGAACAAATCTTTGTTTGCAATGTGTTGTATATA
TTTGTTAATTTGCGCCATTGTGAGCTATTGCTAGACAGTATGTTTAGCAT
ATCAGCCTTAAAGGTGCCCTAAGCGATTTCAGGGGGTAAAACTTGAAATA
TTCTGGGGAAAACAATTCTGTTTGGTGAAGTTGAAATTGACATTTACTTC
CCCATATTAGCACATCTGCATCATTATTTCATACTTTAGGCGTTTAAAAA
TAGCACAGAAGCAAGCCACAAAAGGAGTATTTTATTTATTGGGTCCACCA
AAAAATCAGCCCAGAATCCAGCCATAACCGTTTTCTGTCGACAATTTTCG
GTAACTTCCGGCCGCGTGACGTCACAATGCCCCAGCACATTGAGCCATGA
CCACGTGATTATTTCTTTGGAAGCATTCGGGACTTATCGGTCAGAATCGT
GCATGTTCGGAAGATTTGAAATGATGGCTGGCCTCAGATTTTCAATGAGT
TCCCACCACACAACGACATTGCATTTTTGCTCCATGATGGTCGATATGCA
ATGGGATAGTGTTATCTAAACTTACTATGGATAGAAATCAGAAAAAGATT
GATTTTGAATATGTGACTTTCAGTGCCCTAATATTGCTTAGCTCAACTTT
GACCTCACCCACAATCACTTCGGCTCTGTAACTATGAAATGGTTCATTCT
GATGCATCTAGTGCCTAAAGTGTCTATTTGCATCAACTCGATTGTCTGCT
ACTATTATTGCAGTGCAGTTCATATTCAATTTTCATTGTGTTCAAACATG
GGCGCCACGTCATTATAATATATTGCGAATACATAAATCAAGGCAAAACG
TGGTCCAATTATTCCTACTTTGAAACTTTACACCTCAGATATCGGCGTCA
AAGTGACCTGCACATCTCACCTCCTCCTGGTCAGTTTTCCACGCACTTCG
AGCAACGGATTTAGTTTTCAGAAGGAAGACGTCCACTTTGCAGCGCCACC
TTGCAGTGCTGATGAAAACTCCACCCACATCTACATTCGAGCACCCCTTA
CGGACTGCGGCACTAGGAAAAGACAGGTTTGATCGAAACAATGGAAAATT
GTGGATACTGACTAGAATTTGTTCTTGAACTACTTTATATTATACGTATG
CGTACTACGCAAATTTATGCATTATGAATACCTGATCTGAGGATACGAGC
TACAGCATCCGATCTGATAACAATTTCTTGGGCACCATTCTTAAAGGCAC
CCAGAGCACTTTATGTGGCTTCAAACTCAAATTAAAAAACTCCAGTTTTT
AGCCATTTCTACACATAGTAAGTTTCAATAACACTATACCATTACATATC
GATATTCAAGGAGCAAAGATGCGATGTCGCTGTGTGTTGAGCACTCAAAA
AAAAATCCAAGCGCTGTCAGCGCCGCCGTTTTTGTTCTCAAATTTTCCGA
CTTCTTGGAACGTGACGTCCCGTCGCCGGAACTTGCAGAGAACTGACCGT
TCCAGTCGAACACAGGAATAACGCACAAGTACATGAGAGACGGACTTGGT
AGTAGTTGGCAATGTGTTACGTAAGCTCCGTCCCCTTGAGTGCCCGAGAT
ATTTTCTTTTTCATTTCGTTTTTTTCTTGGGTATTCATGTAGCCAATGCA
GTGAGATATCTGTCCCAGATATGCATTGTCATTTCTGCTTGTCATTTCTG
TCCCACTAGCGCTGTTTTTGACGGAGGTGTTCCAAATAGAACAGGGGGTT
CTATATGGTGTTCGACGGGAACGGTCCATTACCGACGAAAAAACCGTTTT
GAGTTCTGTTTCAATCTAATTACACTAGGCGCGTGAAACTAAAGGGGTCA
TTGTGTAGCTTATTTTCGCGTGGCTTTTGAGCGCTTGTGACATGTAATCA
TCACGCAAATGTGGTAAACAGTGGCATTAAATGACAATTTCATAAAGATT
ACAGCAACTACAATATTTCCAATTTTCAAGCCACATAAAATGCTCTGGAT
GCCTTTAAACATGCGATGTTTCTCTTTTTATCAAAATGTTATCTGAAGGA
CAACAGATTCATCGTCACCTACAGTAACACCTTGACCATCAACCTGAACG
CTTCCAGTGCGATTAAGATCGACGTGGAATGTCATCTGCTTAGCTCGAAG
GTCGTAACCGTCAACTTTAACCAACAGTCTGTCTACAAGTCTCGTGTCGT
TGGCAGGGGTGAATTTATCGTCTCCATGGAGCTGTACATGAGTGACAGCT
TCCGGTCCCCTGTATCGGAATATCCCCTGTACGTGGAGTTTGGGCAGGTA
AGCAAATCGATGTCATACCTGGGCCTGATACGGGTGTTCCGAACCGTGTA
ATAACTATCCGTATCACATAGGGTTCGGGAGTTGTATCACACGGGCTTCC
ATAGAATATTTCGAATGCATTTCGAGTGCGCCGTTTGCGCCGCCACCGAA
ATTTCGAATGCAGGATTCTGAGGTCGGAATCAATGTTGTTACAGTTTTGT
GTTCGAAGACACAAAACTCCCTCAACTTTTGGCGCATTCCGCATTGAAAT
GTGAGTTTTCTCGGGTGGGTATGACATAAATAAAATACAACACGGGGTAT
TCCGTATCACCCGAGGTACCAGCCCGACCGCGGGTAGGATCGCCCGACGG
CCGTATGGTTATTACCTCCATCTTCGATTGGTTGTCTCTGTGTCTTCACA
GCTAGAACTAAAGATCCATTTATTTAATTCGTGTGTATATGTACTTTGGC
ATATCGTCTGCCGGTATGCGCAAGATGATGCACGTTAAGTTTGGGCACCG
TAGCAGTAGTTCTACTAAGGTAATGTGACATTTCAGATCGATATCCCCAT
CTTGAGGTGTGGTACAGTCCACAGCTGGCGCCAGTAAGTTTGATTACTGC
CTTTGCCAGAATGTTAATAATATATATATGCTGATGATTAGGATTGGCGT
GTGTCCATCCGCCTGTGAATATGATAACTGGTTGATACATTTATTTGGTA
TGTTGGTAGGTCTTGACGAGACTGAATCATTAGATGCCCCCCCCCACCCC
CCTAGAGGCTTGTGTAGCAGAACTTCCGGCTTTTGTTTCTTTCGATCTGA
AGACGGTACAGTCACAATCAGTCGGAGTGGGTGATGGCTCGTGAGCTGAC
AAAAGAAGTGAAAGGGGTGTGTGCATTGGACCTCCAAGCAGCTTTTTCTG
GAAGTGCATGGACGTTTTTGTCGGAGGCCTTGAACTAGTACTAGAGATGG
TATGAACTGTGCTGTTCTATCTATTGAAATCGATAACCCACTTTAGGGTT
AAGATGGGAGCTACTTTTTACCTTCACCGCTAGATGGCGCTACAGCAAGT
AAGATGCGGTCCCAAACGTGGCGTATATCTAATTTTTAAGAATTTCATTC
CAGATGCTGTACGCG Coding sequence (CDS) from alignment at Sc0000025:2786979..2794343+ >BlTCONS00044281 ID=BlTCONS00044281|Name=BlTCONS00044281|organism=Branchiostoma lanceolatum|type=CDS|length=1440bp|location=Sequence derived from alignment at Sc0000025:2786979..2794343+ (Branchiostoma lanceolatum)
GAGACTTCAAACGTTCTGACGGGTTCTGTAGCTCGTCTTGTTAGCCCTAC
CGTCTCTGACAGCGGACAGTATTGTCTCCAGTTCGCCTACCACATGTATG
GGGCCGACATCGATCAACTACGTGTGCGGGTCGGGTCAAGTGTCGAATGG
ATACGGTCCAACAACCAAGGAAACAGCTGGCATCAGGCCTCCGTGGACGT
CTACATATTCTACGACCAGATCGTTTTCGAAGGTTTTGGCGGTAACGGCT
ACAGAGGGGACATTGCCATTGACGACGTTGTCCTGTACCCTGGATCATGT
CAGTGGACAGAAAGTCCAACCACATACTTGACCGAAGAACCGACCACGCC
TCCTGACATCGACACTTACGTGTGGACCATGCCCTCGGACTACTATCACA
GCTTCCAGATCCGACTGAGTGGAGGTAACAACTACAGCTACGGTAGAGTG
GAGGTCTACTACAACGGAGAGTGGGGGACTGTCTGTGACGACAGCTTCGA
CCAACACGTCGCCATAGTCGTCTGCGGTGAGCTGGGATTTGATCAGTTCG
GCTCGCACTACTACGATAATGCGCACTACGGCTCGGGCAGCGGCCGGATA
TGGATGGACGATGTCGACTGCACCGGGTTCGAGACTTCCCTGCAGTTCTG
CCAACATCGCGGTTGGGGGAGCCACAACTGCGGACATGAGAAAGACGCCT
CGGTTTTCTGCAGTCTCCAATCGAACCAATCAGAGCCAAGAACTACTGAG
AGGCCACGCCGGTGGTGGTGGGCAACTACTGATGGTTTGAAAACAGTATC
TGACAGGAAACCGTGTGGGGACTTTCCATGGGATACCGATGACGTCACAG
TGTACTGCGACTACGATTGGCTTGATGCATTGGAGAATTTTTGGGTGCGA
GGATACTGCAATGTCAGCTGCCCCTCGGGAGCCGACATGTTGACTGGACC
TCCCGATGATGACTACACGCGCAACAGTGCATTCTTACCGCACGGGAGCT
ACTACTGTGATTATAGGTCATGGCAGGGAACAGAACCCGTGTGCCTGGGT
CAGTACAACAACGCTACCTTGGTAACGGACGAGCCCAACGGAATCCGGCT
GGTGGGGGGAGAGTTCTACGGCTGCGTGGAGATGTACGATGAGGTGACGG
AACAGTGGGGGCCTGTGCGAGGGCGAGCGATGAAATGGTCGGACGTGGCA
TGTAAAACCCTGGGGTTTCACGGAGTACGTGCTACCGACGGCTACCGTTT
AAGCAATGGTAGCATTAGAGACAGTATCATTTCTCTGTCGTCGCATTACC
GACCGGCCTATCCTTCCACAAGCCCGAAGTTTCTCATGATTCCTGGATAC
GATCCTCCAGAAAACGGCCCGGTAATGTTACATGACGCCATTGGACGTGT
GGAGCGAGCATGCGTGCCCGGCCAGTGTTCTCTTTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00044281-exon-Sc0000025-1564993656:2786979..2787198 | BlTCONS00044281-exon-Sc0000025-1564993656:2786979..2787198 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2787304..2787394 | BlTCONS00044281-exon-Sc0000025-1564993656:2787304..2787394 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2788019..2788108 | BlTCONS00044281-exon-Sc0000025-1564993656:2788019..2788108 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2788565..2788897 | BlTCONS00044281-exon-Sc0000025-1564993656:2788565..2788897 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2789021..2789089 | BlTCONS00044281-exon-Sc0000025-1564993656:2789021..2789089 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2789697..2789942 | BlTCONS00044281-exon-Sc0000025-1564993656:2789697..2789942 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2790362..2790808 | BlTCONS00044281-exon-Sc0000025-1564993656:2790362..2790808 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2791817..2792004 | BlTCONS00044281-exon-Sc0000025-1564993656:2791817..2792004 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2792977..2793227 | BlTCONS00044281-exon-Sc0000025-1564993656:2792977..2793227 | Branchiostoma lanceolatum | exon |
| BlTCONS00044281-exon-Sc0000025-1564993656:2794332..2794343 | BlTCONS00044281-exon-Sc0000025-1564993656:2794332..2794343 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:2786979..2794343 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF021835 |
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