TCONS_00045526 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045526
Unique NameTCONS_00045526
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045526 ID=TCONS_00045526|Name=TCONS_00045526|organism=Clytia hemisphaerica|type=transcript|length=292bp
CACGTATTTATAACAAGCTATCATTGTGTAAAGAAAACGTTAGTTTACGA
TCGGTTTTGCAGGCTGAGAATGGAAATACAAAACGCACCTAATTTCTTTA
CTTCGAGTTTCCagaattgaaaatataattattaGAAGAAGAAGGTTATG
GAAAGCAGTACAGAATATAAAGAATGGATAAAACGTCGAAACAGGAATGC
TTTTTTCTCATACTTCCTACTATTCCTGGATGGCCTGGAAACGAGTGCTG
TTACAGTTGTAATGTTATTTTATCTGCAGGATCGATTCCATC
Run BLAST on NCBI

transcript from alignment at sc0008190:3..294

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045526 ID=TCONS_00045526|Name=TCONS_00045526|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at sc0008190:3..294 (Clytia hemisphaerica)
GATGGAATCGATCCTGCAGATAAAATAACATTACAACTGTAACAGCACTC
GTTTCCAGGCCATCCAGGAATAGTAGGAAGTATGAGAAAAAAGCATTCCT
GTTTCGACGTTTTATCCATTCTTTATATTCTGTACTGCTTTCCATAACCT
TCTTCTTCtaataattatattttcaattctGGAAACTCGAAGTAAAGAAA
TTAGGTGCGTTTTGTATTTCCATTCTCAGCCTGCAAAACCGATCGTAAAC
TAACGTTTTCTTTACACAATGATAGCTTGTTATAAATACGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029103XLOC_029103Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045526-exon-sc0008190-1491911889:3..294TCONS_00045526-exon-sc0008190-1491911889:3..294Clytia hemisphaericaexon
TCONS_00045526-exon-sc0008190-1510915933:3..294TCONS_00045526-exon-sc0008190-1510915933:3..294Clytia hemisphaericaexon
TCONS_00045526-exon-sc0008190-1575043694:3..294TCONS_00045526-exon-sc0008190-1575043694:3..294Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0008190supercontigsc0008190:3..294 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.24266	4.98546	0.482383	2.83162	0	0	0	0	0	0	0	0	0	0	0	0	4.15773	2.9503	0	0	6.17877	4.21931	6.35034	10.2144	1.82968	5.71529	18.6939	35.537	0.47287	0.963559
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045526 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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