TCONS_00004434 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004434
Unique NameTCONS_00004434
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2078

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004434 ID=TCONS_00004434|Name=TCONS_00004434|organism=Clytia hemisphaerica|type=transcript|length=2078bp
AGCAAACCCAAGATTTTTAGCAGAGTTTCATCTGAATCGTTTTGAATGTG
ATACCCCACTTCAGATCTTTGTATGGAGTCCGTTGGAATCTTTTGGAGTC
ACAGCGGCATGCAAGAAACACAATTGTCCGCTTTATGGAAGTGATTGGAC
GTCTGACGTCACACATGAAAACTCTGGACGTAACCCTCGATTGATTTATT
GCTTATTTTATAACATTATCCTCATTCAGCGATATTACAGATGTTCGAAT
AAAGGTGATAAATGCCTGATGTCGTCAACATCCAAAGATTTTATGGAACT
GCTACATCCAACCATTGCTAATAACTTTCCATACAAGTTATATTGTAGAT
CAGCATTTTCCTACAAACTTATTGATTTCATATTTGAAATGGTTGCTAAT
GGGTCCAGCTTTAATTCTATTGCAAATAATATAGCCAGCATCAAGGCTGC
CAACTTTAAATCAAAGTCTGGATTAGGTAGTCCCTTGATGCAATTCCCAT
CACCATCAAGATTAGAAACACTGTttcttgacatttttcaaacaagaaaa
aagacCTATCAATTTGCTATGGATAAAGTCGTCCCAGAATGTGTGATTTC
GGTAGACCATACCTTCAAGATAGGGAAAAACATCGGAGGATTCCGCAAGG
TGGACGGCAAATTTATTAAggatgaaaaaaaacttttcattgtGCTTGAT
GAGTATCTTCGGGTTGCGTCCTGGAAATTGACCAAGACCACAAGTCAAGA
TGAAATCCGGGATGTCATTCGTAAACTTAGTGAGAAATGTAAAGAAGTTT
TCATGATCCTGACCGATAATTGCTGCCAAGATAAAAACCTATACCTTCAA
TTCTTCCTCGGCATTCTCGTAAAGCTGGACCTTTTTCATGGAATACAAAG
GGTCACCAATACTATTCCAGCCAACAAGTTCTCcactgaaagatcaaaat
tcaTAAACGATTTTAGCCTTGTGTTTCGCGAGAGAGGGGATGTAGGAAAG
GCCCGTGAAAAACCTACGCCAAGCAAAGATGTTATTTTGAACAACATTGA
CTCTTTCTTAAGGATGAACAAAACATTTATCGGAAATTTGTCAAACAAAG
ACGAATTTATGAAGCAAGTGGAGCTGCTCAAAAAGCACGTTGAAAAAGGT
TGTCTGTCAGATATCGGTGTTGGACATGGCACAGAGGGCAACGAAAGTCT
CCATCGACTCTTGAATCGTAGCTGTCTAAGAGGAGCAACTGTAATCGGTC
CAGAATTAATGGAGTCTGTTTTAACTGTGATTTTCTACCATTACAATGCG
AAGATTGGAGGTATACCACATAAATGTAATAGTTCGATTGTGCCGGTTTT
TCCACCAGAATGTGTTTCCATCCATGATGAATCACCCCCAACATCTCAAC
AAAGTCGAGAAGAACAAAACTTACCTTCCACAGCTCAACAAATTCGAGGC
AGATCCTCGATCATCGATAATCCATCTCCAGAACCATCGCCAAAAGAAAT
TTGcagtcaaaatttacaaaaggtTCTACATAAAGCCCTCTCGCAAATAC
AAGATGTGTCCAAAACTCtgttaaaaattcaagaaatgtCAAAGCTCCGT
GGATTTTCTCCTCAAGAAATATTAAGAAAGGAAGGGATGAGCAACAACAT
TACCTCGAATGCTGATATTAATTTCCTGAATTTCAATTTGAGCGCATTTG
GTCTTGAAGCTTGCAAACCAATAGATGAACCCAGTCAATGctgtattgaa
attttcatacgACAACTATACTcaaagatagattttgaaaatgattctGA
ATTGGTACGACATTTCAAATCTCTCGGTTTAACTGGTGTGGTTAGAAATG
ATACATCATTGCTTCGaatGGTATGCGAAGGATACATGCAACGTTTAGAA
GATACCAACTTGAGTCAATACGGCATTCTCAACTTATGCTGTAATGTTTT
AAGAGTACCACTTTTGGTTATACAATCTGTTGCTCGCTTATCGATGTTCC
CCATTATACCGAAGGAACAACTACTATATACACCTATTTTGATTTGTATC
GATGATAATTGTTTCATGGAAACGCGAC
Run BLAST on NCBI

protein sequence of TCONS_00004434-protein

>TCONS_00004434-protein ID=TCONS_00004434-protein|Name=TCONS_00004434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=692bp
ANPRFLAEFHLNRFECDTPLQIFVWSPLESFGVTAACKKHNCPLYGSDWT
SDVTHENSGRNPRLIYCLFYNIILIQRYYRCSNKGDKCLMSSTSKDFMEL
LHPTIANNFPYKLYCRSAFSYKLIDFIFEMVANGSSFNSIANNIASIKAA
NFKSKSGLGSPLMQFPSPSRLETLFLDIFQTRKKTYQFAMDKVVPECVIS
VDHTFKIGKNIGGFRKVDGKFIKDEKKLFIVLDEYLRVASWKLTKTTSQD
EIRDVIRKLSEKCKEVFMILTDNCCQDKNLYLQFFLGILVKLDLFHGIQR
VTNTIPANKFSTERSKFINDFSLVFRERGDVGKAREKPTPSKDVILNNID
SFLRMNKTFIGNLSNKDEFMKQVELLKKHVEKGCLSDIGVGHGTEGNESL
HRLLNRSCLRGATVIGPELMESVLTVIFYHYNAKIGGIPHKCNSSIVPVF
PPECVSIHDESPPTSQQSREEQNLPSTAQQIRGRSSIIDNPSPEPSPKEI
CSQNLQKVLHKALSQIQDVSKTLLKIQEMSKLRGFSPQEILRKEGMSNNI
TSNADINFLNFNLSAFGLEACKPIDEPSQCCIEIFIRQLYSKIDFENDSE
LVRHFKSLGLTGVVRNDTSLLRMVCEGYMQRLEDTNLSQYGILNLCCNVL
RVPLLVIQSVARLSMFPIIPKEQLLYTPILICIDDNCFMETR
Run BLAST on NCBI

transcript from alignment at sc0000044:802014..807947-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004434 ID=TCONS_00004434|Name=TCONS_00004434|organism=Clytia hemisphaerica|type=transcript|length=5934bp|location=Sequence derived from alignment at sc0000044:802014..807947- (Clytia hemisphaerica)
AGCAAACCCAAGATTTTTAGCAGAGTTTCATCTGAATCGTTTTGAATGTG ATACCCCACTTCAGATCTTTGTATGGAGTCCGTTGGAATCTTTTGGAGTC ACAGCGGCATGCAAGAAACACAATTGTCCGCTTTATGGAAGTGATTGGAC GTCTGACGTCACACATGAAAACTCTGGACGTAACCCTCGATTGATTTATT GCTTATTTTATAACATTATCCTCATTCAGCGATATTACAGATGTTCGAAT AAAGGTGATAAATGCCTGATGTCGTCAACATCCAAAGATTTTATGGAACT GCTACATCCAACCATTGCTAATAACTTTCCATACAAGTTATATTGTAGAT CAGCATTTTCCTACAAACTTATTGATTTCATATTTGAAATGGTTGCTAAT GGGTCCAGCTTTAATTCTATTGCAAATAATATAGCCAGCATCAAGGCTGC CAACTTTAAATCAAAGTCTGGATTAGGTAGTCCCTTGATGCAATTCCCAT CACCATCAAGATTAGAAACACTGTTTCTTGACATTTTTCAAACAAGAAAA AAGACCTATCAATTTGCTATGGATAAAGTCGTCCCAGAATGTGTGATTTC GGTAGACCATACCTTCAAGATAGGGAAAAACATCGGAGGATTCCGCAAGG TGGACGGCAAATTTATTAAGGATGAAAAAAAACTTTTCATTGTGCTTGAT GAGTATCTTCGGGTTGCGTCCTGGAAATTGACCAAGACCACAAGTCAAGA TGAAATCCGGGATGTCATTCGTAAACTTAGTGAGAAATGTAAAGAAGTTT TCATGATCCTGACCGATAATTGCTGCCAAGATAAAAACCTATACCTTCAA TTCTTCCTCGGCATTCTCGTAAAGCTGGACCTTTTTCATGGAATACAAAG GGTCACCAATACTATTCCAGCCAACAAGTTCTCCACTGAAAGATCAAAAT TCATAAACGATTTTAGCCTTGTGTTTCGCGAGAGAGGGGATGTAGGAAAG GCCCGTGAAAAACCTACGCCAAGCAAAGATGTTATTTTGAACAACATTGA CTCTTTCTTAAGGATGAACAAAACATTTATCGGAAATTTGTCAAACAAAG ACGAATTTATGAAGCAAGTGGAGCTGCTCAAAAAGCACGTTGAAAAAGGT TGTCTGTCAGATATCGGTGTTGGACATGGCACAGAGGGCAACGAAAGTCT CCATCGACTCTTGAATCGTAGCTGTCTAAGAGGTAGGGACATTTAGTCTG GAAGCATCATTTTAATTGACAAGCTAGGCAGAGTTTAATTAAACATTAAA AATAATCTTCGCTCAAAATAACTGTAAAAATGCAAAGCCATGTCCATTAG TTTTTCCTGATTTTTATTCACAGAGACGAATTCATTTTCCAAAAAAAAAA TTTTTTGTTCAATAAAATCAAAAAATTTGGTGTTGTTTATTACCCTGAGT ATCAGAGGTTAAGTTTTCAAAAAATATATTAACCTCTGAAGACAAATAAT AGAGATTTTATCGCGCATGTGTCAATCTAATCACTGTACAAAAAATCAAA GATGAAGAGCAAATATTACCATATTAATNCCTAGCAGACTGTATCAGTAT GCAGTTTACTATTTACGAATTCCCCAGAAACCTCCAAGTGTAATTGAAAT GAGTTTATTTCGAAAGAAATCTTTTATATTATCCCCAAATGTATAACAGT AATTACTAAACTTTTCATTATTATGGAGCGGTATCCGTGTCAAAAACATT CAGTTTAGATTACGGTCGGAGGTTTGTAACTGATTGGGTCGGTTTGAAAG GTGATTGGGTCGGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTCGTCTTTTAAACCGACCCAATCACCTTTCAAACCGACCC AATCAGTTACAAACCTCCGACCGTTATCTAAACTGGATGTTTTTGACACG GATACCGCTCCATAATTATGGAAATGTCACTTTAATTGAATCGAAATAAT AGACATACTTGTTATGATTCTCTATCACTGGTCGTGTTCACACTACAGAC CTTCCTTAATAAAAATGTAGTTAGGAGAATCTTTTGTTGACTACAATACA GAACGTGCATTTAACAAAGAGTCGAAGGCGTAGTATTGTAATTTTTAATC GATCTTCCTTAATTAAGAGTCGTAAGCTCTATTGTCTTAAGGGTAGGGTA GAGGCTTCCCTTAAAACAAAAGATTTTATTAAGGAAGCATAAACAAAGAA TGCGTGCAGTGAACAAAAGATTTTACGATTTCAAAAACGAATGAACTGAG GAAAAAATTAGAAATAGTGCAAACGGTGTTGTTGATGTGAAAGATGAATG CAGTTATTGAGTAAAACCATTAGAACAAATATGTTTGCGAATTTCAAGTG ATGTATGGATACCAATATCAACCAATCACAGGTTAAATCAAAACTCTCAA TAAAAAATCAACCAATGAGAAGCCTTAAGTAAAATCAATTACCGTGTTAT AATAGATCTCGTGAACCTACAAAGAACTGTAATAAACCAGTGTATTGATC CATCATAAATCTCTTTGTTTAACTTTGATAGATTTAATTAAGTAAACTTT TCAGTGTGAACGCGCCCACTGACTCTTTTTACAAAGCTTTGATGACTTTT TGTAAGTTGTGTTTTCAACGACGGGAATAAAAATATCAACTTTGAACCTC ATCCAAGATCTTGGATGGTCGTCATAGTTACTTTTGTCTTCGTTGATTGC GCGCTGAATAGAATCTCGATTCGTCGGCACAGTGTCAAAATATGATTTTG ACCTGTGCTATTCACGGTAGTTGTTTATTTGTTTGAAAAAAAATATCCGT GTCAAAATTGGCCAAAAAATGCCCGAAATAAGATTTTTCTCGATTTTCTT AGGGTTGGTTCATTAGATTTTTCTTGTTTCTTCACAAAGATGCAAAATGG TAAACCCCCAAATGTGCCACTTTTTGAAAAAAAATAATTGTGGTGCAAGT ATACCTAAAAAAAGGCCACGATTGGGCAAAAACCGCCAAAGATAAGGTTT TCTCCATTACCTAGAATTTGGTCATCATTTTCTTTGTATTACAAGCTCTG ATTTTTATTTCCTTTTTATTAGCATACATTATCACACGTATATCAATAGT CATTTAACGCGAATTGAAATTTTTTGTGCTTTTAAATACCCCCTTAATTA AAACCAGCCGTTGTCCTTGAAAAAGCAGATAAAATTCGCGTTAATTTTTT GCAAGTTAATTTCAAGGCCGTTGAATAGGCCTAGTAACATTCGTGTAATA GGTATGTTAATTTATTTTTAGGGCCTGAAACATTCAATTTATAGGTTTAA TCTAGTATACCTTTTGTTATTTTCATATATTTTCATACATAATGATTACA TATATGAACTTGTTTTTGTATGAGATAACTCCACTAGTTATTATGATTTT TGGGGCCTGGGTTTTTCGCCAAAACGAGGCTAAAACTTTNTATATTTGCT ACCTAATACTAAATATTTGAAATGTTACAATTGGGCCTTCTAATAACGGG AAAATCTGAAGTTGAGCCCAGTGCGGTGCGCACGTTCGACTATATATGAA CTTGTTTTTGTATGAGATAACTCCACTAATTATTATATTTTTAAAAGGCA TAGAATCGCCATGTAATTATAAAGCAATCGAAGGCCTTTTTTGTCTCAGC TGCATATTTCGGAATAAACTTTAATATATTTTCTGTTCTGTTTCAGGAGC AACTGTAATCGGTCCAGAATTAATGGAGTCTGTTTTAACTGTGATTTTCT ACCATTACAATGCGAAGATTGGAGGTATACCACATAAATGTAATAGTTCG ATTGTGCCGGTTTTTCCACCAGAATGTGTTTCCATCCATGATGAATCACC CCCAACATCTCAACAAAGTCGAGAAGAACAAAACTTACCTTCCACAGCTC AACAAATTCGAGGCAGATCCTCGATCATCGATAATCCATCTCCAGAACCA TCGCCAAAAGAAATTTGCAGTCAAAATTTACAAAAGGTTCTACATAAAGC CCTCTCGCAAATACAAGATGTGTCCAAAACTCTGTTAAAAATTCAAGAAA TGTCAAAGCTCCGTGGATTTTCTCCTCAAGAAATATTAAGAAAGGAAGGG ATGAGCAACAACATTACCTCGAATGCTGATATTAATTTCCTGAATTTCAA TTTGAGCGCATTTGGTCTTGAAGCTTGCAAACCAATAGATGAACCCAGTC AATGCTGTATTGAAATTTTCATACGACAACTATACTCAAAGATAGATTTT GAAAATGATTCTGAATTGGTACGACATTTCAAATCTCTCGGTTTAACTGG TGTGGTTAGAAATGATACATCATTGCTTCGGTAAGTAAGTTTACGTTTTT ACATCATCGTTCCATCTCTGTCGTCTGAGTTACCTTTAAAAAGGTTCACA ATTCTAGTTTCAGATTGAAGGCATTTTCGAAACTAAAATAGGCCAATTTC AGAGGGTTAATTTTTAAGTTCCTATGAAAAGCCGTGTTTGGCGGAATTTC ATTTCGCGAATTGCACCCAAAATTGTAAAACAAAAACTCTTCCCTTCAAG TACCTTGATTTGAATAATTGAATATTTTGACCCCGTGGAATTAAAAAAAA CGTTTAGGGCTTGTTACTATTTGCCCCAGAGGGTGCTATTTAACTCGGTA AAAAACTTTTTAAATGAATTGAAATTTTCGCACAATTACTATATTTCTAT AAGTCAGCTCCACAGCAAGTTCGATATGTCTTAGTCATCATTTTGTGATG ACGTAACATTTTCAGCATTTCGATTTTACGCGAGCATAAACTTTTGCGAA TTGGCCTATTTAGAATTTTTTAAAGCATCAACCTTCACGACAAAAACCAA AATTCGCAAAAATCACAAACGTTTCTGCTCGCGAAAGTTTGTACACTTAT AATTGACACGATTCGACTCAGTCCTCTTCCTGTCTTCACTTTTTCTTGCT TAGAAGTTCTATGTGAGGACAGAACACAATTATTTTGAAATACATTTTCG TGCCACTTGCTTTTATTTTTAGAATGGTATGCGAAGGATACATGCAACGT TTAGAAGATACCAACTTGAGTCAATACGGCATTCTCAACTTATGCTGTAA TGTTTTAAGAGTACCACTTTTGGTTATACAATCTGTTGCTCGCTTATCGA TGTTCCCCATTATACCGAAGGAACAACTACTATATACACCTATTTTGATT TGTATCGATGATAATTGTTTCATGGAAACGCGAC

Coding sequence (CDS) from alignment at sc0000044:802014..807947-

>TCONS_00004434 ID=TCONS_00004434|Name=TCONS_00004434|organism=Clytia hemisphaerica|type=CDS|length=6228bp|location=Sequence derived from alignment at sc0000044:802014..807947- (Clytia hemisphaerica)
AATGGTATGCGAAGGATACATGCAACGTTTAGAAGATACCAACTTGAGTC
AATACGGCATTCTCAACTTATGCTGTAATGTTTTAAGAGTACCACTTTTG
GTTATACAATCTGTTGCTCGCTTATCGATGTTCCCCATTATACCGAAGGA
ACAACTACTATATACACCTATTTTGATTTGTATCGATGATAATTGTTTCA
TGGAAACGCGAGAGCAACTGTAATCGGTCCAGAATTAATGGAGTCTGTTT
TAACTGTGATTTTCTACCATTACAATGCGAAGATTGGAGGTATACCACAT
AAATGTAATAGTTCGATTGTGCCGGTTTTTCCACCAGAATGTGTTTCCAT
CCATGATGAATCACCCCCAACATCTCAACAAAGTCGAGAAGAACAAAACT
TACCTTCCACAGCTCAACAAATTCGAGGCAGATCCTCGATCATCGATAAT
CCATCTCCAGAACCATCGCCAAAAGAAATTTGCAGTCAAAATTTACAAAA
GGTTCTACATAAAGCCCTCTCGCAAATACAAGATGTGTCCAAAACTCTGT
TAAAAATTCAAGAAATGTCAAAGCTCCGTGGATTTTCTCCTCAAGAAATA
TTAAGAAAGGAAGGGATGAGCAACAACATTACCTCGAATGCTGATATTAA
TTTCCTGAATTTCAATTTGAGCGCATTTGGTCTTGAAGCTTGCAAACCAA
TAGATGAACCCAGTCAATGCTGTATTGAAATTTTCATACGACAACTATAC
TCAAAGATAGATTTTGAAAATGATTCTGAATTGGTACGACATTTCAAATC
TCTCGGTTTAACTGGTGTGGTTAGAAATGATACATCATTGCTTCGGCAAA
CCCAAGATTTTTAGCAGAGTTTCATCTGAATCGTTTTGAATGTGATACCC
CACTTCAGATCTTTGTATGGAGTCCGTTGGAATCTTTTGGAGTCACAGCG
GCATGCAAGAAACACAATTGTCCGCTTTATGGAAGTGATTGGACGTCTGA
CGTCACACATGAAAACTCTGGACGTAACCCTCGATTGATTTATTGCTTAT
TTTATAACATTATCCTCATTCAGCGATATTACAGATGTTCGAATAAAGGT
GATAAATGCCTGATGTCGTCAACATCCAAAGATTTTATGGAACTGCTACA
TCCAACCATTGCTAATAACTTTCCATACAAGTTATATTGTAGATCAGCAT
TTTCCTACAAACTTATTGATTTCATATTTGAAATGGTTGCTAATGGGTCC
AGCTTTAATTCTATTGCAAATAATATAGCCAGCATCAAGGCTGCCAACTT
TAAATCAAAGTCTGGATTAGGTAGTCCCTTGATGCAATTCCCATCACCAT
CAAGATTAGAAACACTGTTTCTTGACATTTTTCAAACAAGAAAAAAGACC
TATCAATTTGCTATGGATAAAGTCGTCCCAGAATGTGTGATTTCGGTAGA
CCATACCTTCAAGATAGGGAAAAACATCGGAGGATTCCGCAAGGTGGACG
GCAAATTTATTAAGGATGAAAAAAAACTTTTCATTGTGCTTGATGAGTAT
CTTCGGGTTGCGTCCTGGAAATTGACCAAGACCACAAGTCAAGATGAAAT
CCGGGATGTCATTCGTAAACTTAGTGAGAAATGTAAAGAAGTTTTCATGA
TCCTGACCGATAATTGCTGCCAAGATAAAAACCTATACCTTCAATTCTTC
CTCGGCATTCTCGTAAAGCTGGACCTTTTTCATGGAATACAAAGGGTCAC
CAATACTATTCCAGCCAACAAGTTCTCCACTGAAAGATCAAAATTCATAA
ACGATTTTAGCCTTGTGTTTCGCGAGAGAGGGGATGTAGGAAAGGCCCGT
GAAAAACCTACGCCAAGCAAAGATGTTATTTTGAACAACATTGACTCTTT
CTTAAGGATGAACAAAACATTTATCGGAAATTTGTCAAACAAAGACGAAT
TTATGAAGCAAGTGGAGCTGCTCAAAAAGCACGTTGAAAAAGGTTGTCTG
TCAGATATCGGTGTTGGACATGGCACAGAGGGCAACGAAAGTCTCCATCG
ACTCTTGAATCGTAGCTGTCTAAGAGAATGGTATGCGAAGGATACATGCA
ACGTTTAGAAGATACCAACTTGAGTCAATACGGCATTCTCAACTTATGCT
GTAATGTTTTAAGAGTACCACTTTTGGTTATACAATCTGTTGCTCGCTTA
TCGATGTTCCCCATTATACCGAAGGAACAACTACTATATACACCTATTTT
GATTTGTATCGATGATAATTGTTTCATGGAAACGCGAGAGCAACTGTAAT
CGGTCCAGAATTAATGGAGTCTGTTTTAACTGTGATTTTCTACCATTACA
ATGCGAAGATTGGAGGTATACCACATAAATGTAATAGTTCGATTGTGCCG
GTTTTTCCACCAGAATGTGTTTCCATCCATGATGAATCACCCCCAACATC
TCAACAAAGTCGAGAAGAACAAAACTTACCTTCCACAGCTCAACAAATTC
GAGGCAGATCCTCGATCATCGATAATCCATCTCCAGAACCATCGCCAAAA
GAAATTTGCAGTCAAAATTTACAAAAGGTTCTACATAAAGCCCTCTCGCA
AATACAAGATGTGTCCAAAACTCTGTTAAAAATTCAAGAAATGTCAAAGC
TCCGTGGATTTTCTCCTCAAGAAATATTAAGAAAGGAAGGGATGAGCAAC
AACATTACCTCGAATGCTGATATTAATTTCCTGAATTTCAATTTGAGCGC
ATTTGGTCTTGAAGCTTGCAAACCAATAGATGAACCCAGTCAATGCTGTA
TTGAAATTTTCATACGACAACTATACTCAAAGATAGATTTTGAAAATGAT
TCTGAATTGGTACGACATTTCAAATCTCTCGGTTTAACTGGTGTGGTTAG
AAATGATACATCATTGCTTCGGCAAACCCAAGATTTTTAGCAGAGTTTCA
TCTGAATCGTTTTGAATGTGATACCCCACTTCAGATCTTTGTATGGAGTC
CGTTGGAATCTTTTGGAGTCACAGCGGCATGCAAGAAACACAATTGTCCG
CTTTATGGAAGTGATTGGACGTCTGACGTCACACATGAAAACTCTGGACG
TAACCCTCGATTGATTTATTGCTTATTTTATAACATTATCCTCATTCAGC
GATATTACAGATGTTCGAATAAAGGTGATAAATGCCTGATGTCGTCAACA
TCCAAAGATTTTATGGAACTGCTACATCCAACCATTGCTAATAACTTTCC
ATACAAGTTATATTGTAGATCAGCATTTTCCTACAAACTTATTGATTTCA
TATTTGAAATGGTTGCTAATGGGTCCAGCTTTAATTCTATTGCAAATAAT
ATAGCCAGCATCAAGGCTGCCAACTTTAAATCAAAGTCTGGATTAGGTAG
TCCCTTGATGCAATTCCCATCACCATCAAGATTAGAAACACTGTTTCTTG
ACATTTTTCAAACAAGAAAAAAGACCTATCAATTTGCTATGGATAAAGTC
GTCCCAGAATGTGTGATTTCGGTAGACCATACCTTCAAGATAGGGAAAAA
CATCGGAGGATTCCGCAAGGTGGACGGCAAATTTATTAAGGATGAAAAAA
AACTTTTCATTGTGCTTGATGAGTATCTTCGGGTTGCGTCCTGGAAATTG
ACCAAGACCACAAGTCAAGATGAAATCCGGGATGTCATTCGTAAACTTAG
TGAGAAATGTAAAGAAGTTTTCATGATCCTGACCGATAATTGCTGCCAAG
ATAAAAACCTATACCTTCAATTCTTCCTCGGCATTCTCGTAAAGCTGGAC
CTTTTTCATGGAATACAAAGGGTCACCAATACTATTCCAGCCAACAAGTT
CTCCACTGAAAGATCAAAATTCATAAACGATTTTAGCCTTGTGTTTCGCG
AGAGAGGGGATGTAGGAAAGGCCCGTGAAAAACCTACGCCAAGCAAAGAT
GTTATTTTGAACAACATTGACTCTTTCTTAAGGATGAACAAAACATTTAT
CGGAAATTTGTCAAACAAAGACGAATTTATGAAGCAAGTGGAGCTGCTCA
AAAAGCACGTTGAAAAAGGTTGTCTGTCAGATATCGGTGTTGGACATGGC
ACAGAGGGCAACGAAAGTCTCCATCGACTCTTGAATCGTAGCTGTCTAAG
AGAATGGTATGCGAAGGATACATGCAACGTTTAGAAGATACCAACTTGAG
TCAATACGGCATTCTCAACTTATGCTGTAATGTTTTAAGAGTACCACTTT
TGGTTATACAATCTGTTGCTCGCTTATCGATGTTCCCCATTATACCGAAG
GAACAACTACTATATACACCTATTTTGATTTGTATCGATGATAATTGTTT
CATGGAAACGCGAGAGCAACTGTAATCGGTCCAGAATTAATGGAGTCTGT
TTTAACTGTGATTTTCTACCATTACAATGCGAAGATTGGAGGTATACCAC
ATAAATGTAATAGTTCGATTGTGCCGGTTTTTCCACCAGAATGTGTTTCC
ATCCATGATGAATCACCCCCAACATCTCAACAAAGTCGAGAAGAACAAAA
CTTACCTTCCACAGCTCAACAAATTCGAGGCAGATCCTCGATCATCGATA
ATCCATCTCCAGAACCATCGCCAAAAGAAATTTGCAGTCAAAATTTACAA
AAGGTTCTACATAAAGCCCTCTCGCAAATACAAGATGTGTCCAAAACTCT
GTTAAAAATTCAAGAAATGTCAAAGCTCCGTGGATTTTCTCCTCAAGAAA
TATTAAGAAAGGAAGGGATGAGCAACAACATTACCTCGAATGCTGATATT
AATTTCCTGAATTTCAATTTGAGCGCATTTGGTCTTGAAGCTTGCAAACC
AATAGATGAACCCAGTCAATGCTGTATTGAAATTTTCATACGACAACTAT
ACTCAAAGATAGATTTTGAAAATGATTCTGAATTGGTACGACATTTCAAA
TCTCTCGGTTTAACTGGTGTGGTTAGAAATGATACATCATTGCTTCGGCA
AACCCAAGATTTTTAGCAGAGTTTCATCTGAATCGTTTTGAATGTGATAC
CCCACTTCAGATCTTTGTATGGAGTCCGTTGGAATCTTTTGGAGTCACAG
CGGCATGCAAGAAACACAATTGTCCGCTTTATGGAAGTGATTGGACGTCT
GACGTCACACATGAAAACTCTGGACGTAACCCTCGATTGATTTATTGCTT
ATTTTATAACATTATCCTCATTCAGCGATATTACAGATGTTCGAATAAAG
GTGATAAATGCCTGATGTCGTCAACATCCAAAGATTTTATGGAACTGCTA
CATCCAACCATTGCTAATAACTTTCCATACAAGTTATATTGTAGATCAGC
ATTTTCCTACAAACTTATTGATTTCATATTTGAAATGGTTGCTAATGGGT
CCAGCTTTAATTCTATTGCAAATAATATAGCCAGCATCAAGGCTGCCAAC
TTTAAATCAAAGTCTGGATTAGGTAGTCCCTTGATGCAATTCCCATCACC
ATCAAGATTAGAAACACTGTTTCTTGACATTTTTCAAACAAGAAAAAAGA
CCTATCAATTTGCTATGGATAAAGTCGTCCCAGAATGTGTGATTTCGGTA
GACCATACCTTCAAGATAGGGAAAAACATCGGAGGATTCCGCAAGGTGGA
CGGCAAATTTATTAAGGATGAAAAAAAACTTTTCATTGTGCTTGATGAGT
ATCTTCGGGTTGCGTCCTGGAAATTGACCAAGACCACAAGTCAAGATGAA
ATCCGGGATGTCATTCGTAAACTTAGTGAGAAATGTAAAGAAGTTTTCAT
GATCCTGACCGATAATTGCTGCCAAGATAAAAACCTATACCTTCAATTCT
TCCTCGGCATTCTCGTAAAGCTGGACCTTTTTCATGGAATACAAAGGGTC
ACCAATACTATTCCAGCCAACAAGTTCTCCACTGAAAGATCAAAATTCAT
AAACGATTTTAGCCTTGTGTTTCGCGAGAGAGGGGATGTAGGAAAGGCCC
GTGAAAAACCTACGCCAAGCAAAGATGTTATTTTGAACAACATTGACTCT
TTCTTAAGGATGAACAAAACATTTATCGGAAATTTGTCAAACAAAGACGA
ATTTATGAAGCAAGTGGAGCTGCTCAAAAAGCACGTTGAAAAAGGTTGTC
TGTCAGATATCGGTGTTGGACATGGCACAGAGGGCAACGAAAGTCTCCAT
CGACTCTTGAATCGTAGCTGTCTAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002482XLOC_002482Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004434-proteinTCONS_00004434-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004434-exon-sc0000044-1575043694:806716..807947TCONS_00004434-exon-sc0000044-1575043694:806716..807947Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1575043694:802918..803551TCONS_00004434-exon-sc0000044-1575043694:802918..803551Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1575043694:802014..802225TCONS_00004434-exon-sc0000044-1575043694:802014..802225Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1510915933:806716..807947TCONS_00004434-exon-sc0000044-1510915933:806716..807947Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1510915933:802918..803551TCONS_00004434-exon-sc0000044-1510915933:802918..803551Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1510915933:802014..802225TCONS_00004434-exon-sc0000044-1510915933:802014..802225Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1491911889:806716..807947TCONS_00004434-exon-sc0000044-1491911889:806716..807947Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1491911889:802918..803551TCONS_00004434-exon-sc0000044-1491911889:802918..803551Clytia hemisphaericaexon
TCONS_00004434-exon-sc0000044-1491911889:802014..802225TCONS_00004434-exon-sc0000044-1491911889:802014..802225Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:802014..807947 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0189822 0 0 0 0.204789 0.24274 0.195237 0.0913892 0.0159959 0.0198136 0.0576946 0.012642 0.138869 0.262213 0 0 0 0.0146057 0 0.0211154 0.0183531 0.0537119 0 0.0593616 0.713312 0.927638 0 0 0.147481 0.171726
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004434 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top