BlTCONS00035841 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00035841
Unique NameBlTCONS00035841
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000017:1800881..1802080+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00035841 ID=BlTCONS00035841|Name=BlTCONS00035841|organism=Branchiostoma lanceolatum|type=mRNA|length=1200bp|location=Sequence derived from alignment at Sc0000017:1800881..1802080+ (Branchiostoma lanceolatum)
GTTAAGAAGATTATATGTTCGATTAGTAGTTAACAGAAGTAGGTAATGTG CATTAAGTTTATACAATAATACCGCACAAGTGAAACTAACTTATCGTAAA AGTAGGGACCAAGTCGATACTTCTGGATTAATAGAACGAGCACCAATGTC AGCTAGGTCATTGAACATAGGGTTCTGGAACATTCATGGCTTAGGAAAGA AACTTGAAGAATGTAGCTTTAGAAGTAGCTTAGAAAAACTAGATCTCTTC TCTCTTATTGAAACCTGGAGTAACGAATCTTCAGAAGTTAACATTCCAAA TTATCAAAATTTCTCGTCTCTGAGACAAAAACAACGGAAAGCAAGAAGGA ATTCAGGCGGAATAACTTTTTACTACAAAAATGAACTCTCTAAATACATT AAAAGAGAGCGTGGAACTTCTGGATGTAAAGACTTACTCTGGGTTCGCAT ATCTAAAGATCTGTTAGGGCTCTCCAAAGATGTTTTCATATGTAGTGTCT ACATTAGCCCTATATACTCCACCATACACAAAAGGGCGGAGGATTCTATT TTTGACATTTTAGAGCAAGATATAGCAGCCTTCATGTCCAAAGGCCATGT AATCCTAGGGGGAGATTTTAACAGTAGAATAGGGTCCTTACAAGACTTTA CTGAAAAAGAGCACATAGATTCTGAACTAGAGCCAGTACCGCTCGCACCA AACATAGATATTCCTAGAAATTTCACGGACAGAAACCCGGCTAATTCTTT TGGCAAATGTCTTGTAGACTTATGTGCCCAGGCTGACCTGCGCATTCTGA ACGGAAGAGTCCTGGGCGACTTAAATGGTAGATTCACGTGCTACCAGCCT AATGGTTGCAGCACGGTAGACTACGCCATCTCTAGTAGCTCACTGTTTCA CAACTTAAATATGTTTAAAGTCCATCCACTGACTGAATTTTCGGACCATT GTATGGTTTCTGTGAACATACGTGCATTAGGGCACTCACAGGAAAACGTG AAAACTAAACAAAACACACGCCCCTTCCCATGTAGGTTTGTCTGGGGTCC CGATTCTAGCGATAAATTCATAAAAGCGCTAAGTAGTTCATCAATTTCCC AGAAACTAGAAAAAATTGTATCCTTAGATGAAAATGACATGCAGTCAACA ACAAAGACAAACGAGAATGTACGCGAGCTTCAAGACATTTTCGTATTGGC

Coding sequence (CDS) from alignment at Sc0000017:1800881..1802080+

>BlTCONS00035841 ID=BlTCONS00035841|Name=BlTCONS00035841|organism=Branchiostoma lanceolatum|type=CDS|length=1053bp|location=Sequence derived from alignment at Sc0000017:1800881..1802080+ (Branchiostoma lanceolatum)
ATGTCAGCTAGGTCATTGAACATAGGGTTCTGGAACATTCATGGCTTAGG
AAAGAAACTTGAAGAATGTAGCTTTAGAAGTAGCTTAGAAAAACTAGATC
TCTTCTCTCTTATTGAAACCTGGAGTAACGAATCTTCAGAAGTTAACATT
CCAAATTATCAAAATTTCTCGTCTCTGAGACAAAAACAACGGAAAGCAAG
AAGGAATTCAGGCGGAATAACTTTTTACTACAAAAATGAACTCTCTAAAT
ACATTAAAAGAGAGCGTGGAACTTCTGGATGTAAAGACTTACTCTGGGTT
CGCATATCTAAAGATCTGTTAGGGCTCTCCAAAGATGTTTTCATATGTAG
TGTCTACATTAGCCCTATATACTCCACCATACACAAAAGGGCGGAGGATT
CTATTTTTGACATTTTAGAGCAAGATATAGCAGCCTTCATGTCCAAAGGC
CATGTAATCCTAGGGGGAGATTTTAACAGTAGAATAGGGTCCTTACAAGA
CTTTACTGAAAAAGAGCACATAGATTCTGAACTAGAGCCAGTACCGCTCG
CACCAAACATAGATATTCCTAGAAATTTCACGGACAGAAACCCGGCTAAT
TCTTTTGGCAAATGTCTTGTAGACTTATGTGCCCAGGCTGACCTGCGCAT
TCTGAACGGAAGAGTCCTGGGCGACTTAAATGGTAGATTCACGTGCTACC
AGCCTAATGGTTGCAGCACGGTAGACTACGCCATCTCTAGTAGCTCACTG
TTTCACAACTTAAATATGTTTAAAGTCCATCCACTGACTGAATTTTCGGA
CCATTGTATGGTTTCTGTGAACATACGTGCATTAGGGCACTCACAGGAAA
ACGTGAAAACTAAACAAAACACACGCCCCTTCCCATGTAGGTTTGTCTGG
GGTCCCGATTCTAGCGATAAATTCATAAAAGCGCTAAGTAGTTCATCAAT
TTCCCAGAAACTAGAAAAAATTGTATCCTTAGATGAAAATGACATGCAGT
CAACAACAAAGACAAACGAGAATGTACGCGAGCTTCAAGACATTTTCGTA
TTG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00035841-exon-Sc0000017-1564993656:1800881..1802080BlTCONS00035841-exon-Sc0000017-1564993656:1800881..1802080Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00035841BlTCONS00035841-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000017genomeSc0000017:1800881..1802080 +
Properties
Property NameValue
GeneIDBlCUFF017552