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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000008:5191906..5197744+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00021752 ID=BlTCONS00021752|Name=BlTCONS00021752|organism=Branchiostoma lanceolatum|type=mRNA|length=5839bp|location=Sequence derived from alignment at Sc0000008:5191906..5197744+ (Branchiostoma lanceolatum)
CTTAAGAACAAACTGGAGGATCTGGAGAGAAGAAAACTCAGGTAAGACAT
TCAGACATCTTAAGAAAACTACACGGTCTTGAGAGAACTAAGGCTAGGCA
TCTTCTCTCAAGAAGTTTACTTCCTTTGTAAGCTGACAATGTGACATATG
TCTAACTTTATCACTCTCTGTGAAGAACACATATCAGATGACATGGTTTT
GATACAACAGTAGTGAATTCTTATAGCAGACAAGAATCGTCTGAAAGCAA
CTACTGCATACAACTACTTTATGCTATGGTTGCAAAAAGCAACTATTATA
CGTTACAGCAGCAAAGCATCCATAAATGAAAGAAGGTTTGATTTTTTTCT
TTGCTCCCTCCTCAGGTGTGACGAGCTGGGCGATGTGCGGAAACTTCGGC
TGCAGCAGATTTTGCAGCTACGCACCTGCGAGAGGGACGCTGATCAGGTG
GGGACCGCTTTGCCTGCTACACCTGAACCTTAGTAGTTGGTACAGAATTG
AGGGGGGATGATACTGCATGCTATACCTACATGTACATGTATGAGAGGGA
CATTAATGGATAGAGGATGAAATTGTCTGCTACAGTGCAAATGGTGACAA
AGGGAGATTGATGCCAACAGAGAGAATAAAACCATATGCCAAAAGACAGT
TACTCAAGAAACTGGATGAAATACTAATAAGTAACTGTTTTTTGGTGTAT
CTTATTACCTGGGTGTCTAACCTTCATCGACGTAAAATGCCATGATTTGT
TTCATTGCTGTACCAACGCCTACATTTTTTGAACCTTGTGACTTACTTAT
CCATGGTGCCCCAACAACCCACAGAGAGATCAAGAGATATGTGAAGACTT
ACACTATTTGGCAACCAGCTAAACAAATATTCCAATATCAGCAAATTCAT
ATCCTGAACAGAAGTTTATGTTTATGCCCTAAAACCCAGTTACTCAAGAA
ACTGGATAAAATGCTTGAGTAAATGTCTTTTGGTGTATCTTATTACCTTA
TTATCTTATTACCTTAACCTTCACGCAAAACACCATATGTTTCATTGCTG
TACCAATGCCTACATTTTTCACACCTTTCGACTTACCTTATCCTTGGTGC
CCCAACAACCCAAAAGAGGTCAAGGAATAGGTTAGGTGAGGACTTACACT
ATTTCCCAACTAGCTAAACCAATGTGCCACTATCAGCAAATTCATATTCT
TTTAACAGAAGTTTATGTTTATCCCCTAAAACCCAGGCTATCCAGTGGAT
AGAGGAGCTTTGTGGGGTGATGATGATTATGTTGATGATGATGGTAATGA
TGATGATGATGATGTTTATGTTTATCCCTACCCAGGCTATCCAGTGGATA
GAGGAGCTGTGTGTTGTGATGGTGAGGACGCACACTGACGTGGGGAAGTC
AGCAGGCGAAGCTGGGAGACTCAAAGAGGAACACGACAAGTTCCAGTCCA
CTGCTAAGGTAAGCTTAACATCTAGGTCATATGTTGTAAATCTTGAAATG
TTAGCGATGGTTTTATTTTTGCAGTGGCCTCTTTGTGTTTTTTGATTACA
AAATTGTTTTAACCGCAGACACGGAAAGCTTTTTTTCTCCTACCACAAAA
TTAAACCATTGTGAAAGTAAATGAACACAGTGGTTGAAAATGAGCACCTA
AATTCTGTTAGGGACGTTCTCTCAGATGGGAAGTAAAGTCGGATGTCGCA
TGTTTGAGGAGAGCCACACCTCAAGCACATTGAAAATCCCACCAGACTTA
TAAGAAATAGTAGTGGTCCTTCCCGGTCTGAGTGGATCAAACCCATTTAA
AGTTCTGTGAGTCCTTGGTGTTCACAATGTCCTGTGGGAGGCTGTTCCAC
AGCTTAACTGTAGCAGGGATAAAGGTTCTTCTGTGCCAGGAGGAGGATGA
CTTCACAGGTTCTAGGGCTGCACTGTGTTGGGATGTGGACAGACGAGTTT
CTCGGCGATGAACGTAGGGCTCAGGTAGTAGGTTGTAGTATCTTGAAGAG
GTGATTGTCACCTGTTATATCAATCCTGCCACAAATGTGGTAAATCTGAA
TAAATGAGTATAATAAAAGTCGTGTTTGTTTGTCCTCCAGAGCACGTATG
ACTACGGTAAGCAGCTGCTGCAGGCCGCCCTGGTGCTCCGTCGCTCCTGC
CACTACAACTGCCAGCCCAACCACCTCAAGGCTGTCAAGCTGGAGAAGGC
ATGGAACAAGTTCTCCAAGGTACAAATCTCTGGTTTCCTCTCTTTCCTGT
GCTAAATTTTCATCTTTGTGGTAGGAATAACATATTTTTAGTAACAGAAA
TGGGAGGAATTTTTGTTATTTGATGTGTATGGAATGAAAGGTGCTACTTT
GTAGTGGGGAGTTGCTGTGAATGGAATGAAAGCACAAACACCACTAGCAG
CATTTTGCCTGTAGTACCAACTCTGGACAAAAGGGGGAGCCGTTGCACCA
TTGCCTTGGAAAAAGACAGCCCAAAATCACACCATGAAGACACAGTGTTG
ATTTGTTTTCATGTTTGGAAAGTTCTAAATGTTCTATATCTGTTTGTATG
TTTCTAAATGCAGTATTTTTCAAAGAATTGTTGTATATGCTTCTTTTTTT
TCATTGTTTCTCGCAGTGTTTGGACGAGAGAGCCTCAAGACTGTTCATCA
CTCATGACTTCCACAAGAAAGCCGATACAGTAAGTCTCCTCAAAATGATT
AGAACTGTTTTCTGTTCTCATCCTGTTTACATTGATGAAGTTAAGACATC
CAGGACTGGTAGTAAGATACACGAGATAAAAGTTACTCAAGGAACTGTGG
ATAGATTTGGGAAACGGTCAATTTGGAAAGGACCGTTTCCAAAATCTATC
CAGTTCCTTGAGTAACTGTTATCTCGTGTCTTCCTGTTTATTTTCAAAAA
GCTATTCAGTCTTTTAGCTTGTAAAACTTGATATTGTGGTTTTCAATAGT
ATTAAGGATATTCTATGAATATTACAATATTTCATATGTGTAACATGACG
CCTGGCTGTTTTTGTGACCTGTATGCCTCTTTTCCTGTCCGGGTTCTGTT
TGATATGTGTAATCTAATACATTTGCTGTACCTGTGCTGTTTTTGTCCTG
TTCAGCTGCTGTTGGACATGCGTAACCTGATCCCTGTGCTGTTTTTGTCC
TGTTAAGCTCCTGTTGGACCAGATTTTATTAGTACCGATTGGTCTTCATG
GGCAGGTTTGACCATACTCCCTCTGTATAACCTTGATACCTTATTGCCAT
TATACAGCTGCTGCTGGACATGCGTAACCTGATCCACAGCATGCAGCTTG
GCGCGGCGGCGGACTCGCTGCAGGAGAGCGCGGCGAGGATGATGGTGCGG
AGGAGGGAGGAGACGGAGGACGAGTACGAGGAGACGATGAGGATGGGCAA
CTCTCTCATGGTCCGGCTCGCCATGCCCATCATGGACCAGACTAGGTCAG
CTCAGCCTTTCTTGTTTTTTGCTTTGTTTAAGCCCCCCTCTCACTGGACC
CGTGGCACGCTGGTGGCGTTGTTGCGGCCGATTGAATTGACAAAGCACTC
AACGAATTTCATCGACAAAAAACAAAGCTTTGTGTGTTTTGTTGTCTTTT
TGGTCATACTTCTATGTTTTGAATGACATTCCCATTATAAAGTCGAGGGT
GACACAAATCCAGTTAAGGACGCAGCGACGACGCCAGCGTGCCGCGGGTC
CAGTGAGAGGGGGGCTTTACCTGTAAATTAGTGAAAAGGTACATTACGGC
ATCGAATGGCTAGCCAAGCTGACACCAAATGAGAGGTCACAGGTTCAGTT
CCTGGCCAGACATTGTGTCCTTTAAAACTTAATAAAAGGCACTACTCTCC
TAACTATGCCCAGGTGTAAATATGGGTTCCTGACTTCAGTTGGGGAGGTA
CAAGGCGGTGGAAGGAGAGGGATGGGCCCTGCCCTCTAATACAGTGCCCT
ACATGTAGACACAGTGGATAACAACCCACTGCCCCTACGGTCTCTAAGGC
TGTGGGATTATCTTTACCTCTTTTTTTTTACATCAATTCTTGGCCAGCCC
ATAGATTTATTGTCAGCAAAAATAGACATGAAGTTAGGACTAGAAAAAAA
GGTATGATTTTCATTGCTGCTTGCAGAATGCTCATTGTTCATTGTCTTCT
TTTTTGTGTTCTTTTGATGGCTGCAAGGTACAGGAGAGACAAATGGTGTT
AAACATATTTGCTGATAATCATCACATCTTTGCTGATAATTATCACATCT
CCGCTGATAATTATCACACCTGTTGTTTATTGTTAACCAGTCAACACAAG
GTTGCGGAGGACATGAGAGTAGCCATGGTATAGATGTACAGAAGAAGTAG
ATAGGGCGTATTGCTGTTTACTGTTGTTGTTTGTTGTTTACCAGTCAACA
CAAGGTTGCAGAGGATATGAGGGAAGCCACAGGTTTCGTGTTGTTTACTG
TTGTTGTTTGTTGTTTACCAGTCAACACAAGGTTGCGGAGGACACGAGGG
AAGCCATCGACCTTGTGCAGAAGAAGCAGAAACAGCTCGACGTGCGGAAG
AAGGAGGTGGAAGATGTCTGGAAGGAGCACCGGAAGAGACTGGAGGCGCC
GCTCAAGATCCGCCAGCTCCACAGGGAGATGAAACAGGTGAGCTTCCAGG
ACACCAGAAGGTGATAATTATCAGCAAAGATGCGATAATTATCAGTGGAG
ATGTGATAATTATCAACAAAGATTTGATAATTATCCGCAGAGATGTGATG
ATTATCAGAAAAGATGTGATAATCATCAATAAAGATGTGATAATTATCAG
CAAAGATGTGATAATTATAGGTGGTGGTAATTATCGCTGGCAATGATAAT
GATTATGACAAGATGACAGATACTCAAGCAACTTGATAGATTATAAACAG
TTGGTTGAGTAACTGTTACGATATCTTGCATATCTTATTACGACAATAAT
TTTGCCTTGTTCAAGTTACAGTTTGTTACTTTGATTGCTTCCCTATAGAT
TAATCTGGTTAATAGAGAAATGATGTAACGTAACCTGAATAACAATAAGT
CGTTAACAAGTTATCATTTACAACTAGGACAAGATAGGGATGATAATTTT
TAGTCTGTTTATAACTGGTAGTTGATGGTGATAATGATCATGTGACAATG
ATTTTTTAATGGCCATTGTTATTGGTTATATCTAAGTTGTAAAACGTATT
TAGGACTGGGTAGGAGTTACGGTTATCAACTAATGATGATAACTGGTTCC
TACCCTCAGCTGGCTACCTCTGTTAGATGTTAATTTCTTTAAGTAAGTTG
CTGACTGCTATTTATTACTAGACTTAGTTAAGCTATGCTGACAATAACTT
CTTGTTTGCCTAATGGTACACTGACAAGAATCTGTCAAGCTTTGCTTGCT
AATATATTAAAGTTGTAGTTAGCACCAGACTTTTCTCAGCACTACATGCA
CATGTACATACACATAGACCATAGATGAAATGATATCATGTCAGGTAGAA
TTCACCTTGGCACAAGACATCTCAAGGTTTTTCCCCTCCAAGTCTGCAAC
CATTGGCAGCTGATATGTGTAACTGCATGTCTTAGAAAGTTAAAGACAGA
CACAAGTGTTTGTCTTGGTTCACGGCCAGGAGTCTTGAAGCATCTTGCCT
TAGAGTCGCCTCATTAAGAGGTAAACAGGTCGGAAGAATGTGCCAGATTT
AGCCCCAACTCAGTCGTCTGACTTCTTTTCTTGCCAAATTTTATGTACTA
CTCCAAAATGTGTTTGGCTATCTTTGTGGAATTTCTTGTGTTGGAAGTAG
TATACTTTATCTTGCCAGACAGTATGTTCTTTTAAAGAT Coding sequence (CDS) from alignment at Sc0000008:5191906..5197744+ >BlTCONS00021752 ID=BlTCONS00021752|Name=BlTCONS00021752|organism=Branchiostoma lanceolatum|type=CDS|length=819bp|location=Sequence derived from alignment at Sc0000008:5191906..5197744+ (Branchiostoma lanceolatum)
CTTAAGAACAAACTGGAGGATCTGGAGAGAAGAAAACTCAGGTGTGACGA
GCTGGGCGATGTGCGGAAACTTCGGCTGCAGCAGATTTTGCAGCTACGCA
CCTGCGAGAGGGACGCTGATCAGGCTATCCAGTGGATAGAGGAGCTGTGT
GTTGTGATGGTGAGGACGCACACTGACGTGGGGAAGTCAGCAGGCGAAGC
TGGGAGACTCAAAGAGGAACACGACAAGTTCCAGTCCACTGCTAAGAGCA
CGTATGACTACGGTAAGCAGCTGCTGCAGGCCGCCCTGGTGCTCCGTCGC
TCCTGCCACTACAACTGCCAGCCCAACCACCTCAAGGCTGTCAAGCTGGA
GAAGGCATGGAACAAGTTCTCCAAGTGTTTGGACGAGAGAGCCTCAAGAC
TGTTCATCACTCATGACTTCCACAAGAAAGCCGATACACTGCTGCTGGAC
ATGCGTAACCTGATCCACAGCATGCAGCTTGGCGCGGCGGCGGACTCGCT
GCAGGAGAGCGCGGCGAGGATGATGGTGCGGAGGAGGGAGGAGACGGAGG
ACGAGTACGAGGAGACGATGAGGATGGGCAACTCTCTCATGGTCCGGCTC
GCCATGCCCATCATGGACCAGACTAGTCAACACAAGGTTGCGGAGGACAC
GAGGGAAGCCATCGACCTTGTGCAGAAGAAGCAGAAACAGCTCGACGTGC
GGAAGAAGGAGGTGGAAGATGTCTGGAAGGAGCACCGGAAGAGACTGGAG
GCGCCGCTCAAGATCCGCCAGCTCCACAGGGAGATGAAACAGGTGAGCTT
CCAGGACACCAGAAGGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00021752-exon-Sc0000008-1564993656:5191906..5191946 | BlTCONS00021752-exon-Sc0000008-1564993656:5191906..5191946 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5192271..5192352 | BlTCONS00021752-exon-Sc0000008-1564993656:5192271..5192352 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5193241..5193363 | BlTCONS00021752-exon-Sc0000008-1564993656:5193241..5193363 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5193996..5194124 | BlTCONS00021752-exon-Sc0000008-1564993656:5193996..5194124 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5194522..5194584 | BlTCONS00021752-exon-Sc0000008-1564993656:5194522..5194584 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5195163..5195350 | BlTCONS00021752-exon-Sc0000008-1564993656:5195163..5195350 | Branchiostoma lanceolatum | exon |
| BlTCONS00021752-exon-Sc0000008-1564993656:5196377..5197744 | BlTCONS00021752-exon-Sc0000008-1564993656:5196377..5197744 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5191906..5197744 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF010399 |
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