TCONS_00004348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004348
Unique NameTCONS_00004348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004348 ID=TCONS_00004348|Name=TCONS_00004348|organism=Clytia hemisphaerica|type=transcript|length=164bp
TGAGGAAGAAATCACTTGttgttttgaatgattttgaCTTATTCTGTAGA
AATAGGTTGTTTTTagtttgtaaatatttcaaattatatttAACGCATAG
AAAATTTAtattaaattatgaaaataaaactaGCAGGTATCTAAAACTAA
AATGATGTCCTCCG
Run BLAST on NCBI

transcript from alignment at sc0000041:771062..771225

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004348 ID=TCONS_00004348|Name=TCONS_00004348|organism=Clytia hemisphaerica|type=transcript|length=164bp|location=Sequence derived from alignment at sc0000041:771062..771225 (Clytia hemisphaerica)
CGGAGGACATCATTTTAGTTTTAGATACCTGCtagttttattttcataat
ttaataTAAATTTTCTATGCGTTaaatataatttgaaatatttacaaact
AAAAACAACCTATTTCTACAGAATAAGtcaaaatcattcaaaacaaCAAG
TGATTTCTTCCTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002428XLOC_002428Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004348-exon-sc0000041-1491911889:771062..771225TCONS_00004348-exon-sc0000041-1491911889:771062..771225Clytia hemisphaericaexon
TCONS_00004348-exon-sc0000041-1510915933:771062..771225TCONS_00004348-exon-sc0000041-1510915933:771062..771225Clytia hemisphaericaexon
TCONS_00004348-exon-sc0000041-1575043694:771062..771225TCONS_00004348-exon-sc0000041-1575043694:771062..771225Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:771062..771225 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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