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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043813 ID=TCONS_00043813|Name=TCONS_00043813|organism=Clytia hemisphaerica|type=transcript|length=973bp
tttttttcttcgcaGGTTTCACTATTCAAAGGAGAAAAGAATGGAGGGTT
CTCGTTTATGAAAATTGACGAAACCAACGTCATTCGGAAAATTCAAGAGC
AGTTTTCAAGTGGAGAAGACCCTACTCATGTTATCTTGAACATGAAAAGG
AGTTGTGCTTATATCAGTAATTATTCGTCGGGACATTTCGCTGTTACAAA
AATCAAGGAGAACGGTTTGTTAGGAAGTTGTGCTTACATTGAAAGCTATG
ATTCTGGAAGTGGAGTTGTTGCAGAGCGTCAAAAAGAATCCCATCCTCAT
GGCGCATGTTTCAAAGGGAAGTTCGTCTACTGTGTAGATCTAGGGGCTGA
TTGTGTTTATCATTACGTGCATGGAAATGGCTACGAGTTCAATTCACCTA
AAGCTGAACGAACACCTACTGGCCCAGGTTCTGGACCAAGACACATGGTT
TTCCATCCAAGGCATAAGATTGCCTATTTGATTACTGAGCTGACAAACGA
AATAatcattttcaagcaaaatgaAAGTAACGGCTCTTTAGCAGAGGTTT
CTAGACAAAACTTTCTGACAAGTGATTTGATTGAGGATGGTGTAACGAAT
TATGGGTCTGAGATAATGGTGCACCCTAATGGTAAGTATTTATACCTGAG
TAATCGTGGAAATGGTGCTCTCATCTCGTATGAAATTTCAACTGAAGGCG
ATCAACTGAAAAGAATAGAAACGACAAGGCTTGTAGGAACTTGGCCAAGA
CATTTTAACATACATCCGTCGGGAAAAGCATTGTTGTGCGCAGATCAATT
CAAAAACTTAATCGAAGTTTTTTACATCGATGATTACACTGGGAAGTTAA
GAAAAGTTCAAGAAGTTGATTGCAAAAACAGTCCATCATGTGTTATATTT
AAATTCTGAGTACTGAActctttttacattttttattttcgataCGCAAG
TTTTGAACAACCGCGATGTATTC Run BLAST on NCBI protein sequence of TCONS_00043813-protein >TCONS_00043813-protein ID=TCONS_00043813-protein|Name=TCONS_00043813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
FFSSQVSLFKGEKNGGFSFMKIDETNVIRKIQEQFSSGEDPTHVILNMKR
SCAYISNYSSGHFAVTKIKENGLLGSCAYIESYDSGSGVVAERQKESHPH
GACFKGKFVYCVDLGADCVYHYVHGNGYEFNSPKAERTPTGPGSGPRHMV
FHPRHKIAYLITELTNEIIIFKQNESNGSLAEVSRQNFLTSDLIEDGVTN
YGSEIMVHPNGKYLYLSNRGNGALISYEISTEGDQLKRIETTRLVGTWPR
HFNIHPSGKALLCADQFKNLIEVFYIDDYTGKLRKVQEVDCKNSPSCVIF
KF Run BLAST on NCBI transcript from alignment at sc0004612:1..973 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043813 ID=TCONS_00043813|Name=TCONS_00043813|organism=Clytia hemisphaerica|type=transcript|length=973bp|location=Sequence derived from alignment at sc0004612:1..973 (Clytia hemisphaerica)
GAATACATCGCGGTTGTTCAAAACTTGCGtatcgaaaataaaaaatgtaa
aaagagTTCAGTACTCAGAATTTAAATATAACACATGATGGACTGTTTTT
GCAATCAACTTCTTGAACTTTTCTTAACTTCCCAGTGTAATCATCGATGT
AAAAAACTTCGATTAAGTTTTTGAATTGATCTGCGCACAACAATGCTTTT
CCCGACGGATGTATGTTAAAATGTCTTGGCCAAGTTCCTACAAGCCTTGT
CGTTTCTATTCTTTTCAGTTGATCGCCTTCAGTTGAAATTTCATACGAGA
TGAGAGCACCATTTCCACGATTACTCAGGTATAAATACTTACCATTAGGG
TGCACCATTATCTCAGACCCATAATTCGTTACACCATCCTCAATCAAATC
ACTTGTCAGAAAGTTTTGTCTAGAAACCTCTGCTAAAGAGCCGTTACTTt
cattttgcttgaaaatgatTATTTCGTTTGTCAGCTCAGTAATCAAATAG
GCAATCTTATGCCTTGGATGGAAAACCATGTGTCTTGGTCCAGAACCTGG
GCCAGTAGGTGTTCGTTCAGCTTTAGGTGAATTGAACTCGTAGCCATTTC
CATGCACGTAATGATAAACACAATCAGCCCCTAGATCTACACAGTAGACG
AACTTCCCTTTGAAACATGCGCCATGAGGATGGGATTCTTTTTGACGCTC
TGCAACAACTCCACTTCCAGAATCATAGCTTTCAATGTAAGCACAACTTC
CTAACAAACCGTTCTCCTTGATTTTTGTAACAGCGAAATGTCCCGACGAA
TAATTACTGATATAAGCACAACTCCTTTTCATGTTCAAGATAACATGAGT
AGGGTCTTCTCCACTTGAAAACTGCTCTTGAATTTTCCGAATGACGTTGG
TTTCGTCAATTTTCATAAACGAGAACCCTCCATTCTTTTCTCCTTTGAAT
AGTGAAACCtgcgaagaaaaaaa Coding sequence (CDS) from alignment at sc0004612:1..973 >TCONS_00043813 ID=TCONS_00043813|Name=TCONS_00043813|organism=Clytia hemisphaerica|type=CDS|length=909bp|location=Sequence derived from alignment at sc0004612:1..973 (Clytia hemisphaerica)
TCAGAATTTAAATATAACACATGATGGACTGTTTTTGCAATCAACTTCTT
GAACTTTTCTTAACTTCCCAGTGTAATCATCGATGTAAAAAACTTCGATT
AAGTTTTTGAATTGATCTGCGCACAACAATGCTTTTCCCGACGGATGTAT
GTTAAAATGTCTTGGCCAAGTTCCTACAAGCCTTGTCGTTTCTATTCTTT
TCAGTTGATCGCCTTCAGTTGAAATTTCATACGAGATGAGAGCACCATTT
CCACGATTACTCAGGTATAAATACTTACCATTAGGGTGCACCATTATCTC
AGACCCATAATTCGTTACACCATCCTCAATCAAATCACTTGTCAGAAAGT
TTTGTCTAGAAACCTCTGCTAAAGAGCCGTTACTTtcattttgcttgaaa
atgatTATTTCGTTTGTCAGCTCAGTAATCAAATAGGCAATCTTATGCCT
TGGATGGAAAACCATGTGTCTTGGTCCAGAACCTGGGCCAGTAGGTGTTC
GTTCAGCTTTAGGTGAATTGAACTCGTAGCCATTTCCATGCACGTAATGA
TAAACACAATCAGCCCCTAGATCTACACAGTAGACGAACTTCCCTTTGAA
ACATGCGCCATGAGGATGGGATTCTTTTTGACGCTCTGCAACAACTCCAC
TTCCAGAATCATAGCTTTCAATGTAAGCACAACTTCCTAACAAACCGTTC
TCCTTGATTTTTGTAACAGCGAAATGTCCCGACGAATAATTACTGATATA
AGCACAACTCCTTTTCATGTTCAAGATAACATGAGTAGGGTCTTCTCCAC
TTGAAAACTGCTCTTGAATTTTCCGAATGACGTTGGTTTCGTCAATTTTC
ATAAACGAGAACCCTCCATTCTTTTCTCCTTTGAATAGTGAAACCtgcga
agaaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043813-exon-sc0004612-1491911889:1..973 | TCONS_00043813-exon-sc0004612-1491911889:1..973 | Clytia hemisphaerica | exon |
| TCONS_00043813-exon-sc0004612-1510915933:1..973 | TCONS_00043813-exon-sc0004612-1510915933:1..973 | Clytia hemisphaerica | exon |
| TCONS_00043813-exon-sc0004612-1575043694:1..973 | TCONS_00043813-exon-sc0004612-1575043694:1..973 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004612 | supercontig | sc0004612:1..973 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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