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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043469 ID=TCONS_00043469|Name=TCONS_00043469|organism=Clytia hemisphaerica|type=transcript|length=992bp
CCGACTGCCGGAACCAAGACAGCCATATTTTATAAAGTTCCGACACTTTG
CGCATGCGTGATAGGAACTGCCGGAACCGTATCACTCGGGATNCTCAAGC
GCGTGACCCGCGTGGATTTCAGACAAACGCTGGGTTGATCCCGACAAACT
ACAGCGTAGATCTTAAGGCGATCTAATGGCGATATAATGGTGATCCGTCA
TCACAGTGTAAAATTCATACACCATGATATTCACAGCAAGTTCTTCTAGT
TACATTAAGATATAAAAGGTGAATTGTGGGAGATTAACAACCCTGTCTAA
CAGTCCCAGtggaacattttcaaaaaggggGAATAAAAAGTTCTCTATCG
AAAGCCCGAcaaggatagaaattctattattctCAGCTAAATCCGTTGGG
GATGGTTTAGGTGACGAATTTTTACATTGACTTTCGAATGAGGTTgtatt
caaaagtcaaaaactggtAAAACTTTGTTTGATCGTCAATTTTTAAGTGT
CTTAATAATTAGTTCCTCTGGAACCCTGCGTACTGGCCAAATTCGTCCAA
TTTGTCTCTCCAAATCCATATAACTTAACTAAAACAACAGTTTCAATGTA
ATCTTACTATAAATCCTCGAtttgatgattttcttttagCCGTATTtgcg
attttcacaaatttgGGCGTCATTTACGGCATAATCAGCGCAATGATATC
AACTCATAGATTGGCGTACGTCTATAATCAAAAAGCTATATTCTCTAGTT
AGGCATTGGGTAAAATGTTGTGGGATCCGTAAGTTAAGAGTCACTCCATT
AGTTACTCCACGATGACTTGAAAATGACCAACCCAGAGATGAGATACACC
AATCCTAGTCTCATTTTCAAAACGACTCGTAATGAGGAATCTTTATAAAT
TGAAAGATGCTCCCATTATTTACCTTAAGtggttcacagctcaaaattcg
gaattttcgcgtaatttaatttcacggtttagataatttttg Run BLAST on NCBI transcript from alignment at sc0004260:4140..5131 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043469 ID=TCONS_00043469|Name=TCONS_00043469|organism=Clytia hemisphaerica|type=transcript|length=992bp|location=Sequence derived from alignment at sc0004260:4140..5131 (Clytia hemisphaerica)
caaaaattatctaaaccgtgaaattaaattacgcgaaaattccgaatttt
gagctgtgaaccaCTTAAGGTAAATAATGGGAGCATCTTTCAATTTATAA
AGATTCCTCATTACGAGTCGTTTTGAAAATGAGACTAGGATTGGTGTATC
TCATCTCTGGGTTGGTCATTTTCAAGTCATCGTGGAGTAACTAATGGAGT
GACTCTTAACTTACGGATCCCACAACATTTTACCCAATGCCTAACTAGAG
AATATAGCTTTTTGATTATAGACGTACGCCAATCTATGAGTTGATATCAT
TGCGCTGATTATGCCGTAAATGACGCCcaaatttgtgaaaatcgcaAATA
CGGctaaaagaaaatcatcaaaTCGAGGATTTATAGTAAGATTACATTGA
AACTGTTGTTTTAGTTAAGTTATATGGATTTGGAGAGACAAATTGGACGA
ATTTGGCCAGTACGCAGGGTTCCAGAGGAACTAATTATTAAGACACTTAA
AAATTGACGATCAAACAAAGTTTTaccagtttttgacttttgaatacAAC
CTCATTCGAAAGTCAATGTAAAAATTCGTCACCTAAACCATCCCCAACGG
ATTTAGCTGagaataatagaatttctatccttgTCGGGCTTTCGATAGAG
AACTTTTTATTCcccctttttgaaaatgttccaCTGGGACTGTTAGACAG
GGTTGTTAATCTCCCACAATTCACCTTTTATATCTTAATGTAACTAGAAG
AACTTGCTGTGAATATCATGGTGTATGAATTTTACACTGTGATGACGGAT
CACCATTATATCGCCATTAGATCGCCTTAAGATCTACGCTGTAGTTTGTC
GGGATCAACCCAGCGTTTGTCTGAAATCCACGCGGGTCACGCGCTTGAGN
ATCCCGAGTGATACGGTTCCGGCAGTTCCTATCACGCATGCGCAAAGTGT
CGGAACTTTATAAAATATGGCTGTCTTGGTTCCGGCAGTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043469-exon-sc0004260-1491911889:4140..5131 | TCONS_00043469-exon-sc0004260-1491911889:4140..5131 | Clytia hemisphaerica | exon |
| TCONS_00043469-exon-sc0004260-1510915933:4140..5131 | TCONS_00043469-exon-sc0004260-1510915933:4140..5131 | Clytia hemisphaerica | exon |
| TCONS_00043469-exon-sc0004260-1575043694:4140..5131 | TCONS_00043469-exon-sc0004260-1575043694:4140..5131 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004260 | supercontig | sc0004260:4140..5131 . |
Blast
The following BLAST results are available for this feature:
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