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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043357 ID=TCONS_00043357|Name=TCONS_00043357|organism=Clytia hemisphaerica|type=transcript|length=724bp
AGTGATTGTCGTCATTTAACGAAAGCGTTTCCAGAGCTTGTAACCATTTA
TAAGATGATGTTAAAACGAGCTGTTTTTGTTCCAGAGTTATGTCACCATA
ACGGTGTATCAACTGAATTTACGTTTAAGAAttcaacaaaaattgaaaaa
gatttatcaaaagCTGCGTTGTTGAGTACGATCTACAGCCTGATATTGCT
TGGTAATGTTGATCGAGATTTGCACTATTTGATTTTGTTTCATCCAGAAC
TGAAAACAGCTGAGGAAATTGCATTGGAAGAAATCCTGCATTGTGTGTTC
ACCTATTCGCCCTTACCTGATGGTGATGTGTTTCTCGTGCGGCAACAAGA
CGCGGACGAACGTAAACCGCTTCGCGATTTATTTCACAGCGTCGACCGGA
GATTTATGTCTGCAAATTATGCAATGGAGTATTTTGGTATTGACGTACAC
TCAGAGcgaaaatgttgttttgaaattaCAAAAGAATATGAGGATGTTGA
TCTGAGTCAATATGAAGACCAGTCAAGGACACGGCAACAATTATTATATA
AAGACTGTGAGAGGGACTTACAAGTGAAAGGTGTACAACGCATGTTCACA
AGATGGGATAATTgctttctattgtttaaaaacgAGAAAGATCGTAATGG
TGAATCTGTAGAAAGAAAGCATTACGAGTTTAGTATGGGACTGGCTCCCA
AAGAGACGCTTTTGGCCATCCAGC Run BLAST on NCBI protein sequence of TCONS_00043357-protein >TCONS_00043357-protein ID=TCONS_00043357-protein|Name=TCONS_00043357-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
SDCRHLTKAFPELVTIYKMMLKRAVFVPELCHHNGVSTEFTFKNSTKIEK
DLSKAALLSTIYSLILLGNVDRDLHYLILFHPELKTAEEIALEEILHCVF
TYSPLPDGDVFLVRQQDADERKPLRDLFHSVDRRFMSANYAMEYFGIDVH
SERKCCFEITKEYEDVDLSQYEDQSRTRQQLLYKDCERDLQVKGVQRMFT
RWDNCFLLFKNEKDRNGESVERKHYEFSMGLAPKETLLAIQ Run BLAST on NCBI transcript from alignment at sc0004149:416..1139 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043357 ID=TCONS_00043357|Name=TCONS_00043357|organism=Clytia hemisphaerica|type=transcript|length=724bp|location=Sequence derived from alignment at sc0004149:416..1139 (Clytia hemisphaerica)
GCTGGATGGCCAAAAGCGTCTCTTTGGGAGCCAGTCCCATACTAAACTCG
TAATGCTTTCTTTCTACAGATTCACCATTACGATCTTTCTcgtttttaaa
caatagaaagcAATTATCCCATCTTGTGAACATGCGTTGTACACCTTTCA
CTTGTAAGTCCCTCTCACAGTCTTTATATAATAATTGTTGCCGTGTCCTT
GACTGGTCTTCATATTGACTCAGATCAACATCCTCATATTCTTTTGtaat
ttcaaaacaacattttcgCTCTGAGTGTACGTCAATACCAAAATACTCCA
TTGCATAATTTGCAGACATAAATCTCCGGTCGACGCTGTGAAATAAATCG
CGAAGCGGTTTACGTTCGTCCGCGTCTTGTTGCCGCACGAGAAACACATC
ACCATCAGGTAAGGGCGAATAGGTGAACACACAATGCAGGATTTCTTCCA
ATGCAATTTCCTCAGCTGTTTTCAGTTCTGGATGAAACAAAATCAAATAG
TGCAAATCTCGATCAACATTACCAAGCAATATCAGGCTGTAGATCGTACT
CAACAACGCAGcttttgataaatctttttcaatttttgttgaaTTCTTAA
ACGTAAATTCAGTTGATACACCGTTATGGTGACATAACTCTGGAACAAAA
ACAGCTCGTTTTAACATCATCTTATAAATGGTTACAAGCTCTGGAAACGC
TTTCGTTAAATGACGACAATCACT Coding sequence (CDS) from alignment at sc0004149:416..1139 >TCONS_00043357 ID=TCONS_00043357|Name=TCONS_00043357|organism=Clytia hemisphaerica|type=CDS|length=723bp|location=Sequence derived from alignment at sc0004149:416..1139 (Clytia hemisphaerica)
CTGGATGGCCAAAAGCGTCTCTTTGGGAGCCAGTCCCATACTAAACTCGT
AATGCTTTCTTTCTACAGATTCACCATTACGATCTTTCTcgtttttaaac
aatagaaagcAATTATCCCATCTTGTGAACATGCGTTGTACACCTTTCAC
TTGTAAGTCCCTCTCACAGTCTTTATATAATAATTGTTGCCGTGTCCTTG
ACTGGTCTTCATATTGACTCAGATCAACATCCTCATATTCTTTTGtaatt
tcaaaacaacattttcgCTCTGAGTGTACGTCAATACCAAAATACTCCAT
TGCATAATTTGCAGACATAAATCTCCGGTCGACGCTGTGAAATAAATCGC
GAAGCGGTTTACGTTCGTCCGCGTCTTGTTGCCGCACGAGAAACACATCA
CCATCAGGTAAGGGCGAATAGGTGAACACACAATGCAGGATTTCTTCCAA
TGCAATTTCCTCAGCTGTTTTCAGTTCTGGATGAAACAAAATCAAATAGT
GCAAATCTCGATCAACATTACCAAGCAATATCAGGCTGTAGATCGTACTC
AACAACGCAGcttttgataaatctttttcaatttttgttgaaTTCTTAAA
CGTAAATTCAGTTGATACACCGTTATGGTGACATAACTCTGGAACAAAAA
CAGCTCGTTTTAACATCATCTTATAAATGGTTACAAGCTCTGGAAACGCT
TTCGTTAAATGACGACAATCACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043357-exon-sc0004149-1491911889:416..1139 | TCONS_00043357-exon-sc0004149-1491911889:416..1139 | Clytia hemisphaerica | exon |
| TCONS_00043357-exon-sc0004149-1510915933:416..1139 | TCONS_00043357-exon-sc0004149-1510915933:416..1139 | Clytia hemisphaerica | exon |
| TCONS_00043357-exon-sc0004149-1575043694:416..1139 | TCONS_00043357-exon-sc0004149-1575043694:416..1139 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004149 | supercontig | sc0004149:416..1139 . |
Blast
The following BLAST results are available for this feature:
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