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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:5395684..5402634- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00002193 ID=BlTCONS00002193|Name=BlTCONS00002193|organism=Branchiostoma lanceolatum|type=mRNA|length=6951bp|location=Sequence derived from alignment at Sc0000000:5395684..5402634- (Branchiostoma lanceolatum)
ACAACTTCCAAGATGGCGGCGTCCACGAACGTGGTCGGGCCGTAACTTTC
AAGAAAATCATAATTTTATCCATTTATCTGCAAGCCATATTCATTCAGGG
GCCGCTAAATCCTTTAGGTAAGTCATATAGAATATACATATCTGAAAAGA
CAGAAGGAATATCGTGTTAATGTTGATAAAACACCCCTAACGTTTGTGAT
ATTTTTCGTTCGAGTTTCGTAACATGACATGGACTACATGGACTACATGG
ACTACGAAGCCAGTTATACAAATTGTACCCTTCATGATGATTTAAGCTGT
TGGGATTGGAAAGTCGGATAAAGAAAGATCGAAATGAGTTTTGTTGTTCT
TTAATTTTGAGAAAATCTTGATCTCAATATTCAGATTTCAGAAAAGTACA
CCATGTAAATAATTTAGTCGACACCCCCTACAAAGCATTATAAATTTTTT
ATGCCGACATATTCGTTCCCTCATAATTCATGGTTATGCGTTAAAAGTAG
TTTTTCTTTTCTTAAGATGTAACAGAGCATTAACCAGTTTTGTTTTATTT
TGCCTTTACTTCCTATAGGTCCTTCTTTACCTGTGGATTGGGAAACGAGA
TTCAAGAATCACCATGGCAACCCGATTACTTCGTATACTCCACCTAAGAC
ATCAAGCTTTGTCTCTCTGGAAAGGCACGACAGCCTCTGTATGGACAGGT
TATGTGAATAGGATTTTTTTGTTGAGAAGATTACCCAGTAGCACAGTTTC
TGTGGTCAACAGTCAACACACAGATGTAGAAAGTGGTGTTACAGTAGTAA
CAACTGAAGGCTCGGAAACTACAGACTTAGAAACTCAAAGGTTCACCTTG
GAGACAAGGTTAAGAAATGCGCAGAGTCCAGAAGACGTCTGGAAGGAAGT
GAACGAGGAAGGCATGACCGGAGACAACGCAGTTCTGGCGATCGCCAAGT
TGCACGGCTTTACGCAAACCATGAAGGAGGAGGGAGTCACTAACGACGTG
ATTCTCCAAGACCCAAACTTCCTAGTCCTGTGTAACGTCGCCAACAATAG
CGTGGCCAAGCTGTTCACTGGCAGCGTCCTTACCATACTCAGGAACTTGC
TGCTGATTGGTATGAACCCGGAGAGCAAGATAATCAAATCCCTGGAAACT
GAAATCCGATGGCGCATGCGGCGGCTGAACATGTACCATCTCTGCTTTCT
CGCGCAGTTCCCAATGCACGGCGATTCCACCACGGAGAGCCAGAAAGAGC
TCATGAGCGAGGTGTTGCGGAATCTGGACATGCGCTGGACAGAACTTCGT
GAGCCACGGTCCGTAGTTCAGCTGATGGTAAGCGTCGGTCATCTATCTAC
AGGCCTGATGGAGAAGCTAGAAGACAAAGTATTGGAGATGGCGGAACAAC
TATCGCAAGAGGAGACTGCAAGAGTGCTGCAGGTCCTAGCCAATCGCGGC
AGGCGGACAGTACCGCTACTCCGCGCTCTAGCCTACCACCTGTCCCGCCG
ACAGTTTCGCCTCGACATCGACGTCGCCACCACTGTCGCGTACGCATTCG
CTAACCTGAACTTCCCGAACACGGCTGTTCTGCAGAAGATGTCGGCGGAA
CTGGTTGAGCAGGTGCCCCAGCTGAAACCCCCCACCCTCATCAGCTTTGC
AAAGTCCTACTCCTACCTGAAGTGGCACCACCAGCCGCTCATGGACACCA
TGGCTACTTATGTCATAACAAACCTGAAGTTTCTCTCAGAAGAACAGGTC
AGAGCCTTTGGAAATCTTTCATTCTCTTGATCACTAGAAATTTGTATTTT
CCACAGATAGCCGCAGTGATTAGATATTCATCATCATCATCATCTTAGAT
ATTGCCTGAACTAGTACTAGTAGACTAAGTAGACTATTTTGGTTAAATGA
GGAGGTATGTGCAAATTAACCTACAAATTACAAGAGGCAGTTACAATGTA
TCTTGGGAAGCAGCCAAACGATAATACAGTCAAACCTGCCTAGGCGACCA
CCTTTTCAACGCGACCACCTGGCCATGGCGACCGCTTTTTCTCGGTCCCG
AAAATTTTCCCCATAGGCACAAGCATTAAGCTGCCTGCCCAAGGCGACCA
CCTGTCCAACGCGACCGCGACCGCCACGAATTGGGACCGCACAGTGCACA
ATCCCTGCCCATGGCGGCCGCCAAATTTTCAAGCGTGTGGTGACATCGGA
TCATTTTGCTGTCGGATTTCACGGAAATGTTTTCAAGACTTTGAAGGACA
AAAATAAGGACAAAAATATATGGAATAGCAATGTTATAGCATCGATTCCT
CCATGAAGTGTTTTAATAAAACGTTCCCCCTATAAACATTGTAAAGACAA
ATGTTTGTGATGTTGTTGTGCCTATCGTAATCTTATAGTTTAACGNATGA
AAATCAATATTCTTATTTTCTTTTTATTTCCATGAATCTCACAAACCTTT
ATTGGATGCTGTGCGTTCTGCTGCACTCAGACTTACCTTTCGATGCGGTC
GCACAGAGCTTGGTGGCGCGGCGCGACGAAATATTCACCTTGAAAATCAC
ACTGTTCCGTTTTCATCTTTAGCTTTCAGATCGAAAACTTTTTGACCCTT
TTATCCAGCGGTCGGCGCCCCAAAAAAGGCTGGGACCAGCAGGTGTTTTC
TAGGGATTTGTCTTAGGCCTTAAAACTTCGATGATGTGCGTGTGTGTGTG
TACTATTTAATGTAACGTGTGAATGCGGGANCTTAAAACTTCGATGATGT
GCGTGTGTGTGTACTATTTATGTAAGGTGTGAATGCGGGAGGGCGCTGCG
AGATCATCGAGGCAACCATTGTTTTGTAGTCAAAATTATGACGAAAATTT
GTACACGATGTAGCGGGGAAAATGTAATTTTTGTAGGATCTTTCTGTCAA
TGAGAATTGAACCTGGTCCCCACCAGTCATGCTGTCTCAATTCACATAAT
TTTCCATCCATTTACATACTGTATTTGAAAACCTCGACCTGGAAACATGT
GAGTGGAATCCTCTTCATGGCGACCACCTGTCCATCGCGACCGTTTTCGC
TCGGTCCGCCGGGTGGTCGCCTTGGGCAGGTTTGACTGTATATTGTTTTA
TAAAACTAATAAGAGCATGGATGAATTCTGATAGATTTGATATTTACTGT
ATGTACATATATGTACTCATTCTTTTTCTGCATTGTCACAGGTGGCAAAT
TTCCTGCTGGCATTTGGCAGGCTGAACTTTACTCCAAGCAGTGCAGATGA
GTTCTTTGATCAGGTAATTAAACTTAAAAGTCCTCTAGTCATTATTCATT
TTACCAATGTACAGTATAGCATTTTTATGTTCGATGTAGATACATCCATA
TGCCAGTACCTTTTGTATATGACTAAGAAAGCAGCTAGCAGACCCATAAT
TTGATTTGTTTTAACGGCACCTACCTGCACATCATAACAATCCATCCAAA
TTATATTCAGTTATGTTAACTAAAAACAAATTGTAAAGCCACAAACTCTA
TGGAAACATAATACAAATGGAAAATAATTTTGTAATCTAAGTGAAGGTTA
TGATCCCTGTATTTCTCTATCCCCCAGGTCCTGCCCTATGTGACAGAGGG
CCTGTCCTCCCTGCCCAAGTGGATGCAGCTGGACCTGGTCTGGTCTCTGG
CCATCCTGGGCAGACTAACCCCCGCACTGGTGACCAAAGTACTGACCCGG
TCCTTCTACATGGCGCTGACAGGTCAGAGGTTACAGATAAAACTCTTGGA
ATGATTTTATGTTCAGAAAGCTTATATAGTTATAGTTATTGTAGTGTGTT
TACAAGGGCTGCCTTGAATGTGCATACCTGTTCTTTTGAGAGGTCACTTA
TTCAGGGATTTTTACTTTGAAGAATTGAAGAACACACATACAACCATTTA
TCCTCAGTTCTAAAGAGTTAAAATCAATTCCTGAGCTCAGAGAAAAAAAT
GTAGGTCTCCTATTAACCTTTTCCCTGCTGCTTGACTTCATAATCAAGAC
AAGTCTGGCGCAAAACAGGCTATATCAGCAGGTAAAAAGTTAAGAGAATG
AAAAGGCTCTCTCTGTATAACCACCCTTCGACATAACCTACCAGCTTTGT
AGGCACGCAGCGCAGCAGCAGCTGGTTATACTACACTGAACAACCTGTCA
CACCTATCTTTTACACAATCTAGCTGCAAGTGTTCTTTAAAGCTATCTGG
CAGAGATGGTTGTATTTGGTTATATCTGGGTGAGAACACTATTTTTTTTT
ACCATCTCCAGAAGGTCTGTCCTTCAAGGCTCAGTCCGCCCTCCTGAAGA
TTCTCCACATCCACACCACTGTCCAGCAGGAACTGACCGGTTACTCCGGC
CCCTTGCTGACCGCCGAGTTCTGCCACCCCAGTAAGATCCACGTGAGTCC
AGGGAAGAACAACAAGGCGGCGTTACCCGTAGTGGACACCATAGCCACGG
TGGTGGGGGGGCTGCACAAGCTACGGTCTGAAGTCGTCACGCCGTACGGG
TGGACCATAGGTAAGTGTAAACCTACAATGTGTATTCATTTAAAGGTTCA
TCTGTGTTGGTAGAAGTCATTTTGAATCAAATTACCAACACAAGAATTTG
ACTTACCCAAATTTTTGAAAAGCAATCCACTGCTCATTGAGTCATGTGTT
CTATCCACATAACGTGATGTCACAGAAGCAGTGGATTGCTCATTCCTTGA
CAAAGACTGGAGCTGATCAGTAAGTCCAAATTTTGTGTTGGCAATTTGCA
GTTTAACTTCGATTCAGAACAATATATGTGTATTGTCTGTGTAATCAAGA
AACTTGATTTCAGTCTCCATCCACTAATGTCGTGTAGCTCTTGGCATTGT
ATGAAGCCACAAATCATGGATCTAAGAAAAATGACTTTTCATTGATGAAG
TATTATGGGGAAAATGACATTGTTAATGTCAACTCAAATTCGCACCCATA
GATTGTGAATTTGTGCTGGACAAAGATAACCGTGGCTTGACTGTGCACGA
GTACCAGGCTGACCACATCCCCGGGGACCAATCAGAATTGATAGCACTAC
AAGATGGAAGCCACAGGTAAGTCATGCAGTTCTATAAACTGTCAATCAAT
AAGTGAATGAACCAATCAAAGGACTTTTCGCAAGAAGCTTGTAATAAGAC
ACACAAAATGCTAATAGAATTTCACTGCTTTCAGCCAATTTACACAAGGG
AAAGAAATGCAAGATATAGTGCAGAGAAAGTATAAACTTTGTAGTTTTAT
TTGTATTGTGAATTTTACAATAAGACAGTTGTACATCATGGAAGTAAAAA
GTAGGGAACCTTCTGAAACTTCTTGCACATACAGATTTACAGTACATACT
GCATGTATTTTCCAAGTATCATTGTCTGTACATGTTGTTGCCTGGGACAG
TAACATGCAGAGTTGTCTTTACACCTGTTTTGCTGTCCTCTTTTATGGAA
AATTTGAGTAAACGTACAAATAAACATGTGTAGGTTTGCTGTGCTGGTGT
GGGAGTATGGGAACTACTGCCATCAGAGTAAGAAGCTGCTGGGCAGGTTC
GCCATGTGCAGACGACATCTACAGGCTGCCAACTTTACCCTACTGGAGGT
GGGTTTGATAGGGTATTGTGATGTGGATATGTATCTTTGTGTTGGTAAAA
ATTCTGAGGTTTGATGCTTAGTGTTTTGAGCCTTGTGCTGTGGCCGGACA
TAAATGATATCCTGTGCCAATACAGTACATGTAGTATTGTAGAGTTGGAT
ATTTCAAGACTTAGTCATCTTTTCTCATGTAACATTTCACACCAATGCAC
ACAAAATCACACAACCAGAGACACACAATGTGCACATATTCAATCACACA
CACTCACACAGACACTTGTACATGGACATGTACACACAGACATACACACA
CAAACACACACAGAAACATTCCCAGACAGACACACACAAACATGCACACA
CACACACACACAGAGACATACATGCTCTCTCTCTCTCTCTCTCTCTTGCA
CACACACACCACACATAAACAAAAAACATACAAACACAACCTCTTTCCAT
CTCTCACTCAGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCCCTCTCTCTAGCACAAACATACACAGAAAGC
ATATCCTACTACTAGTACTAGGTCCCTCACCAATAGCAGTACATTTATGT
CTAGATTTTCTTACTACCTGCCATTATGCCTACAATGTATATTACTATTA
CATGCATTTATGCTTATGATGATTTTTTACCACAGGTACCATTTTACGAA
TGGAAAGAGCTGAAATCAGAGTTCCAGCGGGTAGAGTATATCAAGGACAA
GATACGGAAGGCTATAGCAGAGGAGGCCGTCAATGTGTTATAGCCAGCCT
GTACCACATAACAACTTTGTCAGAAAACCTGTAAAACAAATATAGAGTTA
AGTATTATAATGTTCAAATGTTAGGATATTATCAACAGTTCTAAGGGTTG
TTCCATTTGAGAAGGGGGGTGACCAACTACCACATTCATTTCAAGCCCTA
TCCCTCCTGCAGCTTCTTACATTTCTTACTGCATCACTCCCCTTGAATTT
AATGGAATAATCCAAATTTTCAGTGGCAAGATTTTCTTTAATTAGGGTAG
AATCCATATTCAACAGTGACTGTTTGACACACATTTAACCGTCAGCACAC
TGACGTAGCAGTTTGACACCCGATACCTTATTGGTTACAGCATTATGCAG
TAGGGAGAAGGTTAAAAATAATCTAAATCTCACAATAGGATGATGTTACA
AAATGAATCCAGACCTTTTAGAATCAAGATGTGTTGCCTTTTTCTAAGCG
ATATGAGATATACAATGTAGTGCTACCATAATGGAAACTCTGTGTGCAAC
TGTCAAGAAAATATGTGATGTTATGGAATTAAAATGTCTGTTGAAAAGCA
C Coding sequence (CDS) from alignment at Sc0000000:5395684..5402634- >BlTCONS00002193 ID=BlTCONS00002193|Name=BlTCONS00002193|organism=Branchiostoma lanceolatum|type=CDS|length=1938bp|location=Sequence derived from alignment at Sc0000000:5395684..5402634- (Branchiostoma lanceolatum)
ATGGCAACCCGATTACTTCGTATACTCCACCTAAGACATCAAGCTTTGTC
TCTCTGGAAAGGCACGACAGCCTCTGTATGGACAGGTTATGTGAATAGGA
TTTTTTTGTTGAGAAGATTACCCAGTAGCACAGTTTCTGTGGTCAACAGT
CAACACACAGATGTAGAAAGTGGTGTTACAGTAGTAACAACTGAAGGCTC
GGAAACTACAGACTTAGAAACTCAAAGGTTCACCTTGGAGACAAGGTTAA
GAAATGCGCAGAGTCCAGAAGACGTCTGGAAGGAAGTGAACGAGGAAGGC
ATGACCGGAGACAACGCAGTTCTGGCGATCGCCAAGTTGCACGGCTTTAC
GCAAACCATGAAGGAGGAGGGAGTCACTAACGACGTGATTCTCCAAGACC
CAAACTTCCTAGTCCTGTGTAACGTCGCCAACAATAGCGTGGCCAAGCTG
TTCACTGGCAGCGTCCTTACCATACTCAGGAACTTGCTGCTGATTGGTAT
GAACCCGGAGAGCAAGATAATCAAATCCCTGGAAACTGAAATCCGATGGC
GCATGCGGCGGCTGAACATGTACCATCTCTGCTTTCTCGCGCAGTTCCCA
ATGCACGGCGATTCCACCACGGAGAGCCAGAAAGAGCTCATGAGCGAGGT
GTTGCGGAATCTGGACATGCGCTGGACAGAACTTCGTGAGCCACGGTCCG
TAGTTCAGCTGATGGTAAGCGTCGGTCATCTATCTACAGGCCTGATGGAG
AAGCTAGAAGACAAAGTATTGGAGATGGCGGAACAACTATCGCAAGAGGA
GACTGCAAGAGTGCTGCAGGTCCTAGCCAATCGCGGCAGGCGGACAGTAC
CGCTACTCCGCGCTCTAGCCTACCACCTGTCCCGCCGACAGTTTCGCCTC
GACATCGACGTCGCCACCACTGTCGCGTACGCATTCGCTAACCTGAACTT
CCCGAACACGGCTGTTCTGCAGAAGATGTCGGCGGAACTGGTTGAGCAGG
TGCCCCAGCTGAAACCCCCCACCCTCATCAGCTTTGCAAAGTCCTACTCC
TACCTGAAGTGGCACCACCAGCCGCTCATGGACACCATGGCTACTTATGT
CATAACAAACCTGAAGTTTCTCTCAGAAGAACAGGTGGCAAATTTCCTGC
TGGCATTTGGCAGGCTGAACTTTACTCCAAGCAGTGCAGATGAGTTCTTT
GATCAGGTCCTGCCCTATGTGACAGAGGGCCTGTCCTCCCTGCCCAAGTG
GATGCAGCTGGACCTGGTCTGGTCTCTGGCCATCCTGGGCAGACTAACCC
CCGCACTGGTGACCAAAGTACTGACCCGGTCCTTCTACATGGCGCTGACA
GAAGGTCTGTCCTTCAAGGCTCAGTCCGCCCTCCTGAAGATTCTCCACAT
CCACACCACTGTCCAGCAGGAACTGACCGGTTACTCCGGCCCCTTGCTGA
CCGCCGAGTTCTGCCACCCCAGTAAGATCCACGTGAGTCCAGGGAAGAAC
AACAAGGCGGCGTTACCCGTAGTGGACACCATAGCCACGGTGGTGGGGGG
GCTGCACAAGCTACGGTCTGAAGTCGTCACGCCGTACGGGTGGACCATAG
ATTGTGAATTTGTGCTGGACAAAGATAACCGTGGCTTGACTGTGCACGAG
TACCAGGCTGACCACATCCCCGGGGACCAATCAGAATTGATAGCACTACA
AGATGGAAGCCACAGGTTTGCTGTGCTGGTGTGGGAGTATGGGAACTACT
GCCATCAGAGTAAGAAGCTGCTGGGCAGGTTCGCCATGTGCAGACGACAT
CTACAGGCTGCCAACTTTACCCTACTGGAGGTACCATTTTACGAATGGAA
AGAGCTGAAATCAGAGTTCCAGCGGGTAGAGTATATCAAGGACAAGATAC
GGAAGGCTATAGCAGAGGAGGCCGTCAATGTGTTATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00002193-exon-Sc0000000-1564993656:5402518..5402634 | BlTCONS00002193-exon-Sc0000000-1564993656:5402518..5402634 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5400888..5402066 | BlTCONS00002193-exon-Sc0000000-1564993656:5400888..5402066 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5399372..5399443 | BlTCONS00002193-exon-Sc0000000-1564993656:5399372..5399443 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5398913..5399057 | BlTCONS00002193-exon-Sc0000000-1564993656:5398913..5399057 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5398125..5398373 | BlTCONS00002193-exon-Sc0000000-1564993656:5398125..5398373 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5397569..5397683 | BlTCONS00002193-exon-Sc0000000-1564993656:5397569..5397683 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5397037..5397151 | BlTCONS00002193-exon-Sc0000000-1564993656:5397037..5397151 | Branchiostoma lanceolatum | exon |
| BlTCONS00002193-exon-Sc0000000-1564993656:5395684..5396349 | BlTCONS00002193-exon-Sc0000000-1564993656:5395684..5396349 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:5395684..5402634 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF001119 |
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