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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3342463..3347386+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000445 ID=BlTCONS00000445|Name=BlTCONS00000445|organism=Branchiostoma lanceolatum|type=mRNA|length=4924bp|location=Sequence derived from alignment at Sc0000000:3342463..3347386+ (Branchiostoma lanceolatum) GAAGGTCAAAGGTCGGGGACAACATGGCGGCCGAAGTGACCTGTTGCAAA
GTATGTCATATATTTTTACCGTTTTAGCGCATATTTCTTCGGTTTTGACT
GTCATAATATTCACAAGTTGTTGACGAAATTAATTTCCTCTTTTTTAATT
TTGATAAAAGTGTATCTGTAAGGTTTGTGTGGCAGAAAACGTATTTTATT
TGCACCCCCCTCCCCACTTTTGAGTTACGGCAAGCAAGTTACGTGCAAGT
TGGCACGTTCTATTTAAAAACTGCATGGACTAAACTAGCACAGATCACTG
TTGTTGTCGATGTGTCTTGCGATTAAAACTACGATTTAAACCTCATTGGT
TTTATAGACAGGTTTTGGAAGTCCAGAAATGAGCTGACGAAAACCGTTAG
CTATGTTGGGGGGCCCGTCTATGCTGGCGAGCCTGTTGGTCCGGTGTCGG
TCGTGTTGTCGTCTGCAGAGGAGGACGTTTTTCTGGAGAAGTCCGACCAA
GTTGTCGTACGACGTGGTACGACCGGCGGAGGTTTCGCCTCGCAGAGATG
TACCCGGACATATCCAGGTGGGTAAGGACTTCTTTTATTTTGAGGCTACC
AACTTCAACTAATTGATAAGGAATTGTTATGCGCAAAAATAACATCATTG
TTTAAATTATCATGATCAATAATCTAACAATTTTTACAGAAACCGCCCTA
TGCAGATAGTGGTATCGCCCCGCTATGGAGAGAAGACATTGAGATAAAAG
ATGAGGAAACGATACAAGGGATGAGGGCAGCTGGAAAACTGGCCAGGAAG
GTCCTAGTACTCGCAGGACAGAGTCTACAGGTGAATGAGATTGAGTCATA
CTGTAAATCTTCAAATATTTGCAGTGGTTTTATTTTCGCGGTTCCTGTCT
GCCGCAAAATCATGACACAGCAAATATGATTTTTGCTACAATATTATTTT
GACCGCAAACATAAAACACAGTGAAAACCTCCTTTCTAGTACCCTTTACC
ATGGAATTTAATCCCCTCAAAAATAAATCAATTTACAGTACTGTTACATG
TATCACCATCAATGAATGAGTCAATAAATATATTGCTAGAGTTTAGAGGT
TCTAGAAAGTGGCCTTCTTCATGCAAGCATTCAGGATGGTACATTTAGTT
CTTTTTACTTTTCCCACTAAGGTCATATTCTGCTAGAAATTTATTTCTTT
TTCACACAGCATCTACCTTTCAAAGACATGAAAGTCCAGTTGTACATAAT
ACAGTTTTCACAGTAGCTTCAGCAGTGCTTGTTTGATATTTCAGGTCGGC
ATGTCAACAGATGAGATTGACAGGTTGGTCCACGAGTCCACTGTCAGCCA
CGGAGCCTACCCCTCCCCGCTGAACTACGGCGGTTTCCCCAAGTCCGTCT
GCACGTCCGTCAATAACGTGGCCTGTCATGGAATACCTGACAGGTTTGTT
TATTTGTTTTTTGTTATTTCTGGTGATATCTTGCTTGTAAATGGAGAGTG
TTTATCAATTAATGAAAAGTGAGAAGTAAACTGAAAGTGTTCTCGAACCA
GTAATCTCCAAGCAGATGTAAGGATCCGGCTCACTCTTGATGTTTTTCAC
CAGTTTTTGCAACATTTTTTGTCAGTTAGGTTCAGTCTTTTCCTTTTATT
TCATTCCTTTCAGTCGACCCTTACAGAATGGTGATATCATCAACATAGAT
GTCACAGTAAGTCATGTTTTTTTTACAACTTCAGTCTGTTCAATTGTAGC
TTAAACCAGACAGATATTGAAAAAGCCATGTGTAAACTAGTGTCCGTGTG
AAGTTGTTTAGCGAATTGAAGTTCACTGTCAATATCTTATAGATGTATAC
AAGCTACATTCTCTGACTTTGTAAACTTAACATCTATTAGACAAATTCAC
TTTAACTTTTCAACAGAGCAACAAGAGAAATGTTGCGATCTTTCCATCCA
ACTGCTTGGAGATTAGCAAACTAAGGTTTTCTGTTTTTTCTTTCTTGCAG
GTGTACTATAACGGTTTCCATGGAGACACGTCAGAGACATTCTTGGTGGG
AAATGTAGACAAAGCTGGTTGCACCCTTGTTGATGTTGCAAGGAGGTTTG
TTTGTTTGAGATCTACAATTATAGTGATCTTACAATGACTAGTCTTGCAC
AGTAGCTAAAACATAATATGTGTGGCGATTGTATTTCATGGCATATTTCA
TAAGATGAAAATGAGTTTTTGTGTTGTTTTCAATTTGCCGTTGAAACAGT
TCAAAGTACCGGTATAAGTAGAAGGCAGACATGCAAAATGATTATGCTGT
GTCATGAATTTGCAGTGGAGGGGACACCACAAAAAGAGAAACTCTGCAAA
TAATAATTCATTGTATATTTATAACTCTAATACTTCAATCCTAGGTGCAG
AGACAAGGCCATCACCATCTGCAGCCCAGGAACACAGTTCTGCGAGATCG
GCAGGACTATCAGGTATGTAAATGTACATGTAAGTGTGTGGGGACGATTC
TTGTACAAACAGCCTCCAGAGTCATGTAGCAGAAGGCACTTTTCTTTAAT
TTTCTGTGGCTTTTGTTTGCTTCACATAACTGGTAAGCTGTCTTTTGCTT
AATCTAAGCATAATACACCAGATTTGTACAGTAGGCACAAGCTGCATTAG
CCTGGGTGCCATCCTATTTCTACTGGGGCTCCTACATTCGTTACCGTAAT
ATCTTTTTAGGGTAGCGAATGTATGAGCCCCGGTAGAAATAGGATGGCAC
CCAGGCTAAAGCTGCGTAAGTCTGGCCTGTAAGGTTTTATCCACTTGCAC
TGAGATGGACCCTTTTTGGTAAGTGTTGGGGGATCTTTATGTGGGTCTTA
AAACCCTTTATGGTATTTTCCAGCTCTGTTGTAAAAGAGGAGGGACTGAC
GGTGAGCCCAAACTTCATCGGACATGGGATAGGAGCCTTCTTCCATGGAC
CACCAGAGATTAATCATATAGGTTTGTATATTATTGGGGGTTTTGTTTTC
ATAAAGAAGTTAGATGTCTTTATTTAACCTCCTTGGTTTTCATGGTTTGG
GCAGTGACTTCTTAATTCAAAATCATGAGACTGCAAAAATGTTTTGTTCT
ACTGCTGTAACTACATATCAATTGTTTCAACTGTGACCTTAAAACACCAC
GAAAACATGCTTTCCCCTTCCGCTGCAAAACAGAATCTTCGCCCCCGCAA
CATAACAAAATGATGTTTCTCATACATCAATATGCAGTGTTTACAAGAAC
AGGCCATTGGTAAAGTGTGATTTGCTGTATTTATTTTTTTCTGTATTTTT
CTCCAGAAAACAGTCTTCCTGGCACAATGGAGACAGGCATGGCATTCACT
ATCGGTAAGAGAACATCACATTTAGACATTGCCTATAACAATTAGTAGTG
GGTAGAGTGTTTGCCTTGCATGTAGTAGCCGAGTCATACCAAAGACCAAT
GGTACATAGTGCTGCTTTCTCTACACTCAGCACTTATCAGAAAGAGTATG
GTAGGTGAACACATAGCAGTCGACTGTCTCCCTGCTGTGAGTGATTACCC
AAGAGTTTTGTGGCCCAAGGGCTGTAGAAATGGAGTTTCAGACAAAAAAT
GGTTGTAGACAAAATGACTTGTATCTAAATCAATGATCAGCCAAGATTCC
AATTTGTTGTTTTCCAGAGCCCATAATCATGGAGGGGTCGCACCAGATAA
CTATCCTGGAGGATGGATGGACGGCTGTGTCTGTGGACAATGGCAGGTGA
GTTAGATGAGCATCTCTTTGGATATTGAAGATTTCTTTATCTCAACCAGT
AAAATCTCACCTGCTTACGTGTAGATGGCTATCAGACACCTTCCCCTGTG
AGCTTCTGGCCTGAGTAATGCTTCTTGCTGCTATAAGTAGCTGAAGTAAG
TGTTGCTTTTGCAGCTACATGTAGAACACGATTCCAAACATGGCTGAGTG
AGATTTTACTGGTTGTGAAAGGTGAGATTTTGTGGTTGCGAAAAAGAAAT
CTCCAATATCCTATGGTCTACCAACCTGATGAAGTTATTTTTGGTGAGCA
TCTTTTTGTTTACAATCCAGGTCTGAGCTTCTGTATCTGTAGTGTACAGA
CGGTATAAAACTGCCCCTCGGCGTAACAAACCAGCTTTGCAGGCACACTT
TGGCAGAAGCTTGTTACATCACACCAAACGACCTGTCACACCTAACCTTT
ACAAATCTACATTGTAACTCCAAGTGTTGTTTAAAGCTTGATGCCCTTAC
CATACTTTCTCACAATAAGTTCTACTCTTCGATGCTTCTACGAAGAAAAC
CTTGCTTGTCCATTGTAGAAGATTCCTTGGCACTAAGGCCAGTAAATAAT
TTTTTATGCATGTGTTTGTTCAATTTTTGTTGGTTTTAATGTGAACTCTT
TTTAATGTCTTTGTTCTCCAGGTCTGCCCAATTTGAACACACTGTTGTCA
TCACAGAGGAGGGAGCAGAAATCCTCACCGCTTAGGTTTTATCAATACAG
ACTCAGGAATGCTATTGATAAACAATGTGGGGGAATGTTTAGGCGTGTAC
AAATCTATGCATCAAAGAATGCCATCACAAAGGGAAGGTATACAGGAGTG
CATTAGTTATGGCATTCATAATTGGGGGGCTTGTGTAGCTCTTCTCAAAC
ACAGGACCTCCATTTAACATTCTATTCAAGGGACCGAAGCTAGGTAATAG
TACATGTACTTATTTCTACCCGAGTGAAGTGAGGAAAGTCGTGTAATGTG
CCTTTCTAAAGGGCACAACATCAATGTCAGGGGAAGTACACGTAACTATG
TCTTTTCAAGACCAAAGGTCATGATATTCATGACGAATATCCTACCTGTA
CTTATGACCACAAATAGATTGATGCAATTTTTATAAATCCTTTAGCCTTT
CCTGTGGTGCCATACTATGTAAGG Coding sequence (CDS) from alignment at Sc0000000:3342463..3347386+ >BlTCONS00000445 ID=BlTCONS00000445|Name=BlTCONS00000445|organism=Branchiostoma lanceolatum|type=CDS|length=993bp|location=Sequence derived from alignment at Sc0000000:3342463..3347386+ (Branchiostoma lanceolatum) ATGTTGGGGGGCCCGTCTATGCTGGCGAGCCTGTTGGTCCGGTGTCGGTC GTGTTGTCGTCTGCAGAGGAGGACGTTTTTCTGGAGAAGTCCGACCAAGT TGTCGTACGACGTGGTACGACCGGCGGAGGTTTCGCCTCGCAGAGATGTA CCCGGACATATCCAGAAACCGCCCTATGCAGATAGTGGTATCGCCCCGCT ATGGAGAGAAGACATTGAGATAAAAGATGAGGAAACGATACAAGGGATGA GGGCAGCTGGAAAACTGGCCAGGAAGGTCCTAGTACTCGCAGGACAGAGT CTACAGGTCGGCATGTCAACAGATGAGATTGACAGGTTGGTCCACGAGTC CACTGTCAGCCACGGAGCCTACCCCTCCCCGCTGAACTACGGCGGTTTCC CCAAGTCCGTCTGCACGTCCGTCAATAACGTGGCCTGTCATGGAATACCT GACAGTCGACCCTTACAGAATGGTGATATCATCAACATAGATGTCACAGT GTACTATAACGGTTTCCATGGAGACACGTCAGAGACATTCTTGGTGGGAA ATGTAGACAAAGCTGGTTGCACCCTTGTTGATGTTGCAAGGAGGTGCAGA GACAAGGCCATCACCATCTGCAGCCCAGGAACACAGTTCTGCGAGATCGG CAGGACTATCAGCTCTGTTGTAAAAGAGGAGGGACTGACGGTGAGCCCAA ACTTCATCGGACATGGGATAGGAGCCTTCTTCCATGGACCACCAGAGATT AATCATATAGAAAACAGTCTTCCTGGCACAATGGAGACAGGCATGGCATT CACTATCGGTCTGCCCAATTTGAACACACTGTTGTCATCACAGAGGAGGG AGCAGAAATCCTCACCGCTTAGGTTTTATCAATACAGACTCAGGAATGCT ATTGATAAACAATGTGGGGGAATGTTTAGGCGTGTACAAATCTATGCATC AAAGAATGCCATCACAAAGGGAAGGTATACAGGAGTGCATTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000445-exon-Sc0000000-1564993656:3342463..3342512 | BlTCONS00000445-exon-Sc0000000-1564993656:3342463..3342512 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3342820..3343029 | BlTCONS00000445-exon-Sc0000000-1564993656:3342820..3343029 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3343152..3343292 | BlTCONS00000445-exon-Sc0000000-1564993656:3343152..3343292 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3343757..3343905 | BlTCONS00000445-exon-Sc0000000-1564993656:3343757..3343905 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3344126..3344168 | BlTCONS00000445-exon-Sc0000000-1564993656:3344126..3344168 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3344463..3344557 | BlTCONS00000445-exon-Sc0000000-1564993656:3344463..3344557 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3344857..3344925 | BlTCONS00000445-exon-Sc0000000-1564993656:3344857..3344925 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3345336..3345433 | BlTCONS00000445-exon-Sc0000000-1564993656:3345336..3345433 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3345769..3345816 | BlTCONS00000445-exon-Sc0000000-1564993656:3345769..3345816 | Branchiostoma lanceolatum | exon |
BlTCONS00000445-exon-Sc0000000-1564993656:3346884..3347386 | BlTCONS00000445-exon-Sc0000000-1564993656:3346884..3347386 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3342463..3347386 + |
Properties
Property Name | Value |
GeneID | BlCUFF000233 |
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