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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96130_evm1 >transcript:BL96130_evm1-protein ID=transcript:BL96130_evm1-protein|Name=transcript:BL96130_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=188bp
MKLSXTDKSLGAVKCDWHQQTAEEYFQTKEGTKFHLIHAIHCLYHVEDLH
VTLRNMWEQLIDGGYMLVGMESENSDWAKLWYKLWDDFGQGDRLKTSSRT
SGDVKQWLDARGIRYVTHESETIFNVTECFKEGSEAGKLLLDFFTQTPDI
SILGYLHLVSSGALPFANGRTRPDSIPGPRYHVARFTR Run BLAST on NCBI mRNA from alignment at Sc0000587:91872..97465- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96130_evm1 ID=transcript:BL96130_evm1|Name=transcript:BL96130_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=5594bp|location=Sequence derived from alignment at Sc0000587:91872..97465- (Branchiostoma lanceolatum)
ATGAAACTGAGGTCATTTGCATATATCATCAGTTGATAATTTTCTCCATC
CAAAGTTGTCCAAAGTATGACAGTCTTTACGGAACGCAGCAGTTTTATGA
AATTGTCCTCATTAGTTATGCACATTAGAGTCTGATTTATCATCTAATTA
TACGAAGCATAACTTAACCTATTTACATATGAAAAATCATGATAATTTGT
CGACCCCATCTTGAGCTATAATATTGTCTTAGTAATTATGCAAATTAGAT
ACTAATTTGTATAATTAATCAGATACTAATTTGCATTATTAGTATCTAAT
CATGTAAATCATCACTCAAGCTATCTACACACCAAAAATCATGACCACCC
GTCAACTTTCAGCTTCTTGAGTCATTCCCTTTCAAATTCTGAAATAAAAT
CAGTTCCAAAAATCTACACGACTTATTATAATCTCCTTCAAAGTGCTGCA
TACCACTCAAGAATCACGACCATAGCATGTCCGGGACACGAGATATCAAA
ACAGAAAGTTCCCCTGCAGTAACCGTAGAAAGTCGCTAGGGGTCCCAAAA
TCTAATTATCAAGTTCTAGGTCTCATCAAGACCTACCCACATACCAACTA
TCAAGATAATCCATCCAGGCCTTCTAGAGTTATGCTGGTCTTCTACATGC
ACACATACATACGTACACATACACACATGCAAGCTNAACGGACAAGAGCC
TCGGTGCTGTGAAGTGTGACTGGCACCAGCAGACAGCAGAAGAGTACTTC
CAGACAAAGGAAGGCACGAAGTTCCACCTGATCCATGCGATCCACTGTCT
GTACCATGTGGAAGATCTTCACGTCACCTTGCGGAACATGTGGGAACAGC
TGATAGATGGTGGCTACATGTTAGTCGGAATGGAGTCAGGTAATCTAGCG
GTTTTTGCAAAGTAGGGTTCGATTCTCAGTATCGAACATAGTACTCAATT
CCATAAAGGTTTACTCGGAACCACCGTTCCGGTTACTGTAGGAAGCTGAA
ATTGCACCGTTAGATTTCCTCTTTTGGTCACATATGCGTTATGCGTTATT
CACCGGATTCTGGTTTCAAGGCCAGTATCGTTGCACCGTCTTGGTCACAC
TTAATTTCCATCCTGTCTTCGAGTGCGATCTCAATAGGTAAGCTGATATT
CTGAACTTGTACCGATTGTATATTCACAGAAAACAGTGATTGGGCGAAGC
TGTGGTACAAGTTGTGGGATGATTTCGGCCAAGGAGACCGTCTCAAGACG
TCATCTCGTACGTCTGGTGACGTCAAACAGTGGCTTGACGCAAGGGGCAT
CAGATACGTCACACATGAGTCTGAGACCATCTTTAACGTCACCGAGTGTT
TTAAGGAGGGCTCAGAGGCGGGGAAACTGCTTCTTGACTTCTTCACACAA
ACGCCTGACATATCCAGTGAGCCAGAAATAAAATCAATGGTTTTGGAATA
TATTCGACGTAATTCTTCTGTGATTGATGATAAGATTCTCTTGAAAACAA
TCGCTGATGACATTGTTGCGTTCAAATGTGGCGTAGAAACAGAGTAATTA
CGATTCTTATATCTTTATTTCAAGAAGGCGGGCGATTCAGCATTAATTGC
CACGCCGGCGGTTGCCTCTGACGAGAGGTGAACATAAGAAAACTGGAACC
TGGGAAATGATTGACTGCTTGTTCTTATCAATAAGATTTGTTTTTTTTTG
CCTGTCGACAGGATGTTCCTGTCACAAACTGTCGTACTTTTTCTTGCCGG
TTCCGCGGCCAAGTGATAAAAGAATTTTCAACGTGTAAGTTGAATTATGC
CAACCGTGCTGTCCAGTATTGATATGAATCTATAATACAGTATGTAACGT
TACATTGACTTGTAATAAAATATGTCTGTCTCTCATAGTTAAAAGAAAAT
GTGTTTACAAAATTTACAAAATATCTAAGGGAAACTGATCAATTGTGCAA
AGTTTCCCAAAATACAATTTAACTGTACATGTAACGTTATATCATATATC
AGCTTCGGTTTAAACACATTTGACACAAGCCGTAACATAGACAAATACAC
CCACTCAACATAAAGTAATCATGGTCTCTGACTAGGCGCTGACTCAAACC
TTGGAAAGAATAATATCTTCATCATAAAAAAGGGCGATTGTTGGGATTAT
CTCCCGCCATATTGGGTTAGAGACACTTTTGACAATAAACCGCCCGGCTA
TGAGGTTGATGAAGTCTGGAGAGTATCTCAGAGTGTGCGGACCTTGTTCC
TACCTCCAGTTCTCGGCTACCTACATTTGGTGAGCAGCGGTGCGTTGCCG
TTTGCGAACGGCCGAACTCGCCCCGATTCCATCCCTGGGCCCCGCTACCA
TGTCGCCCGATTCACCCGGTGACAAGGTCACCAGCCACCCGCCCTATCCT
CGGCTGAGCAGCGAGCTGTCCACGAGCTATCCACCACTCAAAAATCACGA
CCATAGCTCTTCCAGAAAATTAGACCTCAAACTTTGAAGTTCCACTGCAG
TACCATATGAAGCCGCTAGGAGGCCCATCATCGAAATTGACCTTCGTTTT
CCCGACCCCTACCCATCTACCAAATATCATATGAGGATCCGTCGCCAGCT
TCTCGAGTTATGCTTTCAACATACAAACACACACATAGTCAAACCTGTTA
CAAGTGTCCGCCGCTACATTAGGACCACATACCCAATGTGACCCCAATGA
TTTCCACCATTTTCTAACGTTAACGTTACACTGTATCGATTTATGGTCCA
AGTTCTATTATCAAAGATTTTATGTTAGATGAATGTTCCCCCTCTTTGTC
TAGTGACTTCGAAAAGGCCAACTTTAGTACGCAGTCAGTGTAGCCGTGAA
CTTTGACCAGTGAACTTTGATACAAGGGCAACATCATGGCAGGTAGGTGA
ATTGTACATGTAGGCTCCACGAACTTTAACAAGTATAATCTGTCGATCGC
GATCGATACCTAGCTTTGACGCTAACGTTTAGATATATGTATGTTAAGAA
ATGAAGAATTTTTTTGAATATTGAACATTTACATACAAAGACTACAAGTT
TGTTCATGGGGAATTGCAAACACACAGGAATGCTGACGATCGGAAGGCTG
AATCTCTCTCCAGACCGGTATGCGGCAGGAATGAGAGTCTTCCAGGCCGC
ATATGAGACAGGCACAGAGAGCCACTACCAATCATTTGCGGCAATGGTTC
CAGACTCTACACTGTGCGGAGCGGGAGAAGACGTGCGTGTGCTAGCGATA
GGAAGTGGATCAGGTGAGACCGCCATGTTGACCTTGCAATGCAGATTCAA
TTCGTGAGAGGGTTAGCAATCGGTCGGGGATTAGTCAGGAGAGATTCAGC
AGTCTGCGGCTAGAGGTCGGGATGGTTGGGAGTAGGTTAGAAAGCATTCG
GGCTCAGTCGGGAGTAATTCATGTACTGGTTAGGAGATGGGTGGGACATG
TTCGGTGCATGTTCGCCGCAAAAGATAGGCGTAGCCTAAAAACTGGTCAG
ACTGCTCCCGAAGTACCGCCGACCTGATTCGGCTGGTGTTCGGGAACCAT
GCTCGACTATGTGTAACCTCAGGCTTGAGTATTACCACACTTAGATCTTA
TTGTTGTCATTTAGGAGAGGCTGACATCAGCATTCTGAAGAAGCTTCTTA
AAAACCACAAGAGTGTGTACAACAGGGTCGTGGAACCGTCGGAAATGATT
GAGGGCTACAAGGTGAGGTAGTATTTAGTTTGCTTCGAACGTTGTATTGT
TCGTGTCCATACTCATTGTATTCAAACGGTAATGCTTATCTAACAGCATG
GTTACGGAGGATGTTCAAGTGTGTAAACCAGTTTAAAGTGTGGCTACCAG
CTACCTTTACAATGTCATTCACATCAATATAACTGTGTATCATACAGACA
CTAGTGGGAACGGACAAGAGCCTCGGTGCTGTGAAGTGTGACTGGCACCA
GCAGACAGCAGAAGAGTACTTCCAGACAAAGGAAGGCACGAAGTTCCACC
TGATCCATGCGATCCACTGTCTGTACCATGTGGAAGATCTTCACGTCACC
TTGCGGAACATGTGGGAACAGCTGATAGATGGTGGCTACATGTTAGTCGG
AATGGAGTCAGGTAATCTAGCGGTTTTTGCAAAGTAGGGTTCGATTCTCA
GTATCGAACATAGTACTCAATTCCATAAAGGTTTACTCGGAACCACCGTT
CCGGTTACTGTAGGAAGCTGAAATTGCACCGTTAGATTTCCTCTTTTGGT
CACATATGCGTTATGCGTTATTCACCGGATTCTGGTTTCAAGGCCAGTAT
CGTTGCACCGTCTTGGTCACACTTAATTTCCATCCTGTCTTCGAGTGCGA
TCTCAATAGGTAAGCTGATATTCTGTACTTGTACCGATTGTATATTCACA
GAAAACAGTGATTGGGCGAAGCTGTGGTACAAGTTGTGGGATGATTTCGG
CCAAGGAGACCGTCTCAAGACGTCATCTCGTACGTCTGGTGACGTCAAAC
AGTGGCTTGACGCAAGGGGCATCAGATACGTCACACATGAGTCTGAGACC
ATCTTTAACGTCACCGAGTGTTTTAAGGAGGGCTCAGAGGCGGGGAAACT
GCTTCTTGACTTCTTCACACAAACGCCTGACATATCCAGTGAGCCAGAAA
TAAAATCAATGGTTTTGGAATATATTCGACGTAATTCTTCTGTGATTGAT
GATAAGATTCTCTTGAAAACAATCGCTGATGACATTGTTGCGTTCAAATG
TGGCGTAGAAACAGAGTAATTACGATTCTTATATCTTTATTTCAAGAAGG
CGGGCGATTCAGCATTAATTGCCACGCCGGCGGTTGCCTCTGACGAGAGG
TGAACATAAGAAAACTGGAACCTGGGAAATGATTGACTGCTTGTTCTTAT
CAATAAGATTTGTTTTTTTTTGCCTGTCGACAGGATGTTCCTGTCACAAA
CTGTCGTACTTTTTCTTGCCGGTTCCGCGGCCAAGTGATAAAAGAATTTT
CAACGTGTAAGTTGAATTATGCCAACCGTGCTGTCCAGTATTGATATGAA
TCTATAATACAGTATGTAACGTTACATTGACTTGTAATAAAATATGTCTG
TCTCTCATAGTTAAAAGAAAATGTGTTTACAAAATTTACAAAATATCTAA
GGGAAACTGATCAATTGTGCAAAGTTTCCCAAAATACAATTTAACTGTAC
ATGTAACGTTATATCATATATCAGCTTCGGTTTAAACACATTTGACACAA
GCCGTAACATAGACAAATACACCCACTCAACATAAAGTAATCATGGTCTC
TGACTAGGCGCTGACTCAAACCTTGGAAAGAATAATATCTTCATCATAAA
AAAGGGCGATTGTTGGGATTATCTCCCGCCATATTGGGTTAGAGACACTT
TTGACAATAAACCGCCCGGCTATGAGGTTGATGAAGTCTGGAGAGTATCT
CAGAGTGTGCGGACCTTGTTCCTACCTCCAGTTCTCGGCTACCTACATTT
GGTGAGCAGCGGTGCGTTGCCGTTTGCGAACGGCCGAACTCGCCCCGATT
CCATCCCTGGGCCCCGCTACCATGTCGCCCGATTCACCCGGTGA Coding sequence (CDS) from alignment at Sc0000587:91872..97465- >transcript:BL96130_evm1 ID=transcript:BL96130_evm1|Name=transcript:BL96130_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2268bp|location=Sequence derived from alignment at Sc0000587:91872..97465- (Branchiostoma lanceolatum)
ATGAAACTGAGCTNAACGGACAAGAGCCTCGGTGCTGTGAAGTGTGACTG
GCACCAGCAGACAGCAGAAGAGTACTTCCAGACAAAGGAAGGCACGAAGT
TCCACCTGATCCATGCGATCCACTGTCTGTACCATGTGGAAGATCTTCAC
GTCACCTTGCGGAACATGTGGGAACAGCTGATAGATGGTGGCTACATGTT
AGTCGGAATGGAGTCAGAAAACAGTGATTGGGCGAAGCTGTGGTACAAGT
TGTGGGATGATTTCGGCCAAGGAGACCGTCTCAAGACGTCATCTCGTACG
TCTGGTGACGTCAAACAGTGGCTTGACGCAAGGGGCATCAGATACGTCAC
ACATGAGTCTGAGACCATCTTTAACGTCACCGAGTGTTTTAAGGAGGGCT
CAGAGGCGGGGAAACTGCTTCTTGACTTCTTCACACAAACGCCTGACATA
TCCATTCTCGGCTACCTACATTTGGTGAGCAGCGGTGCGTTGCCGTTTGC
GAACGGCCGAACTCGCCCCGATTCCATCCCTGGGCCCCGCTACCATGTCG
CCCGATTCACCCGGTGAATGAAACTGAGCTNAACGGACAAGAGCCTCGGT
GCTGTGAAGTGTGACTGGCACCAGCAGACAGCAGAAGAGTACTTCCAGAC
AAAGGAAGGCACGAAGTTCCACCTGATCCATGCGATCCACTGTCTGTACC
ATGTGGAAGATCTTCACGTCACCTTGCGGAACATGTGGGAACAGCTGATA
GATGGTGGCTACATGTTAGTCGGAATGGAGTCAGAAAACAGTGATTGGGC
GAAGCTGTGGTACAAGTTGTGGGATGATTTCGGCCAAGGAGACCGTCTCA
AGACGTCATCTCGTACGTCTGGTGACGTCAAACAGTGGCTTGACGCAAGG
GGCATCAGATACGTCACACATGAGTCTGAGACCATCTTTAACGTCACCGA
GTGTTTTAAGGAGGGCTCAGAGGCGGGGAAACTGCTTCTTGACTTCTTCA
CACAAACGCCTGACATATCCATTCTCGGCTACCTACATTTGGTGAGCAGC
GGTGCGTTGCCGTTTGCGAACGGCCGAACTCGCCCCGATTCCATCCCTGG
GCCCCGCTACCATGTCGCCCGATTCACCCGGTGAATGAAACTGAGCTNAA
CGGACAAGAGCCTCGGTGCTGTGAAGTGTGACTGGCACCAGCAGACAGCA
GAAGAGTACTTCCAGACAAAGGAAGGCACGAAGTTCCACCTGATCCATGC
GATCCACTGTCTGTACCATGTGGAAGATCTTCACGTCACCTTGCGGAACA
TGTGGGAACAGCTGATAGATGGTGGCTACATGTTAGTCGGAATGGAGTCA
GAAAACAGTGATTGGGCGAAGCTGTGGTACAAGTTGTGGGATGATTTCGG
CCAAGGAGACCGTCTCAAGACGTCATCTCGTACGTCTGGTGACGTCAAAC
AGTGGCTTGACGCAAGGGGCATCAGATACGTCACACATGAGTCTGAGACC
ATCTTTAACGTCACCGAGTGTTTTAAGGAGGGCTCAGAGGCGGGGAAACT
GCTTCTTGACTTCTTCACACAAACGCCTGACATATCCATTCTCGGCTACC
TACATTTGGTGAGCAGCGGTGCGTTGCCGTTTGCGAACGGCCGAACTCGC
CCCGATTCCATCCCTGGGCCCCGCTACCATGTCGCCCGATTCACCCGGTG
AATGAAACTGAGCTNAACGGACAAGAGCCTCGGTGCTGTGAAGTGTGACT
GGCACCAGCAGACAGCAGAAGAGTACTTCCAGACAAAGGAAGGCACGAAG
TTCCACCTGATCCATGCGATCCACTGTCTGTACCATGTGGAAGATCTTCA
CGTCACCTTGCGGAACATGTGGGAACAGCTGATAGATGGTGGCTACATGT
TAGTCGGAATGGAGTCAGAAAACAGTGATTGGGCGAAGCTGTGGTACAAG
TTGTGGGATGATTTCGGCCAAGGAGACCGTCTCAAGACGTCATCTCGTAC
GTCTGGTGACGTCAAACAGTGGCTTGACGCAAGGGGCATCAGATACGTCA
CACATGAGTCTGAGACCATCTTTAACGTCACCGAGTGTTTTAAGGAGGGC
TCAGAGGCGGGGAAACTGCTTCTTGACTTCTTCACACAAACGCCTGACAT
ATCCATTCTCGGCTACCTACATTTGGTGAGCAGCGGTGCGTTGCCGTTTG
CGAACGGCCGAACTCGCCCCGATTCCATCCCTGGGCCCCGCTACCATGTC
GCCCGATTCACCCGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000587 | genome | Sc0000587:91872..97465 - |
Properties
| Property Name | Value |
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| Transcript id | BL96130_evm1 |
| Biotype | protein_coding |
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